RNA–Protein interactions for RNA: ENST00000418309.1

LINC01006-202, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

TSL 3 BASIC

Gene LINC01006, Length 640 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-202ENST00000418309 PAIP2Q9BPZ3 127 aaKnown RBP12.53□□□□□ -0.4
LINC01006-202ENST00000418309 POTEKPQ9BYX7 375 aa12.53□□□□□ -0.4
LINC01006-202ENST00000418309 NUF2Q9BZD4 464 aa12.53□□□□□ -0.4
LINC01006-202ENST00000418309 C20orf27Q9GZN8 174 aa12.53□□□□□ -0.4
LINC01006-202ENST00000418309 KCNK9Q9NPC2 374 aa12.53□□□□□ -0.4
LINC01006-202ENST00000418309 SLC35A3Q9Y2D2 325 aa12.53□□□□□ -0.4
LINC01006-202ENST00000418309 SPIN1Q9Y657 262 aaPredicted RBP12.53□□□□□ -0.4
LINC01006-202ENST00000418309 ZNF724A8MTY0 619 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 ETV2O00321 342 aaPredicted RBP12.52□□□□□ -0.41
LINC01006-202ENST00000418309 TM9SF1O15321 606 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 DNAJA2O60884 412 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 SNUPNO95149 360 aaKnown RBP12.52□□□□□ -0.41
LINC01006-202ENST00000418309 FESP07332 822 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 LBPP18428 481 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 BGNP21810 368 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 S100A3P33764 101 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 APOBEC1P41238 236 aaKnown RBP12.52□□□□□ -0.41
LINC01006-202ENST00000418309 KHKP50053 298 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 CLNS1AP54105 237 aaKnown RBP12.52□□□□□ -0.41
LINC01006-202ENST00000418309 NME5P56597 212 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 PHC1P78364 1004 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 HPCAP84074 193 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 BSPH1Q075Z2 132 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 STX3Q13277 289 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 SYT14P1Q58G82 188 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 SPANXN4Q5MJ08 99 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 TYW3Q6IPR3 259 aaKnown RBP12.52□□□□□ -0.41
LINC01006-202ENST00000418309 ADAM5Q6NVV9 412 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 HMGN2P46Q86SG4 172 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 KIRREL3Q8IZU9 778 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 UBE2J2Q8N2K1 259 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 PIWIL2Q8TC59 973 aaKnown RBP12.52□□□□□ -0.41
LINC01006-202ENST00000418309 SMAP2Q8WU79 429 aaPredicted RBP12.52□□□□□ -0.41
LINC01006-202ENST00000418309 SLC25A43Q8WUT9 341 aaPredicted RBP12.52□□□□□ -0.41
LINC01006-202ENST00000418309 NEUROG1Q92886 237 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 TESCQ96BS2 214 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 ZBTB9Q96C00 473 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 MUCL1Q96DR8 90 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 ZHX1-C8orf76Q96EF9 292 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 SLC35A5Q9BS91 424 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 CTPS2Q9NRF8 586 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 POLE3Q9NRF9 147 aa12.52□□□□□ -0.41
LINC01006-202ENST00000418309 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.52□□□□□ -0.41
LINC01006-202ENST00000418309 MARCOQ9UEW3 520 aaPredicted RBP12.52□□□□□ -0.41
LINC01006-202ENST00000418309 ING1Q9UK53 422 aaPredicted RBP12.52□□□□□ -0.41
LINC01006-202ENST00000418309 A0A1W2PP18 115 aa12.51□□□□□ -0.41
LINC01006-202ENST00000418309 DPRXA6NFQ7 191 aa12.51□□□□□ -0.41
LINC01006-202ENST00000418309 ANKRD28O15084 1053 aa12.51□□□□□ -0.41
LINC01006-202ENST00000418309 KIAA0513O60268 411 aa12.51□□□□□ -0.41
LINC01006-202ENST00000418309 SCN2BO60939 215 aa12.51□□□□□ -0.41
LINC01006-202ENST00000418309 SOD3P08294 240 aa12.51□□□□□ -0.41
LINC01006-202ENST00000418309 CCNA2P20248 432 aa12.51□□□□□ -0.41
LINC01006-202ENST00000418309 PGM1P36871 562 aa12.51□□□□□ -0.41
LINC01006-202ENST00000418309 KCNJ10P78508 379 aa12.51□□□□□ -0.41
LINC01006-202ENST00000418309 LSM11P83369 360 aaKnown RBP eCLIP12.51□□□□□ -0.41
LINC01006-202ENST00000418309 FAPQ12884 760 aa12.51□□□□□ -0.41
LINC01006-202ENST00000418309 TNK1Q13470 666 aa12.51□□□□□ -0.41
LINC01006-202ENST00000418309 CASP8Q14790 479 aa12.51□□□□□ -0.41
LINC01006-202ENST00000418309 PPA1Q15181 289 aa12.51□□□□□ -0.41
LINC01006-202ENST00000418309 DPY19L1Q2PZI1 675 aa12.51□□□□□ -0.41
LINC01006-202ENST00000418309 FAM174BQ3ZCQ3 159 aa12.51□□□□□ -0.41
LINC01006-202ENST00000418309 ZNF672Q499Z4 452 aaPredicted RBP12.51□□□□□ -0.41
LINC01006-202ENST00000418309 SAXO2Q658L1 398 aa12.51□□□□□ -0.41
LINC01006-202ENST00000418309 ATG4DQ86TL0 474 aaPredicted RBP12.51□□□□□ -0.41
LINC01006-202ENST00000418309 MTDHQ86UE4 582 aaKnown RBP12.51□□□□□ -0.41
LINC01006-202ENST00000418309 MREGQ8N565 214 aa12.51□□□□□ -0.41
LINC01006-202ENST00000418309 ARFGAP2Q8N6H7 521 aa12.51□□□□□ -0.41
LINC01006-202ENST00000418309 ZNF75CPQ92670 426 aaPredicted RBP12.51□□□□□ -0.41
LINC01006-202ENST00000418309 ZG16BQ96DA0 208 aa12.51□□□□□ -0.41
LINC01006-202ENST00000418309 NEURL3Q96EH8 262 aa12.51□□□□□ -0.41
LINC01006-202ENST00000418309 SORT1Q99523 831 aa12.51□□□□□ -0.41
LINC01006-202ENST00000418309 SSU72Q9NP77 194 aaKnown RBP12.51□□□□□ -0.41
LINC01006-202ENST00000418309 PNPOQ9NVS9 261 aa12.51□□□□□ -0.41
LINC01006-202ENST00000418309 EMC3Q9P0I2 261 aa12.51□□□□□ -0.41
LINC01006-202ENST00000418309 CHRNA9Q9UGM1 479 aa12.51□□□□□ -0.41
LINC01006-202ENST00000418309 INAFM1C9JVW0 142 aa12.5□□□□□ -0.41
LINC01006-202ENST00000418309 E9PBE3 544 aa12.5□□□□□ -0.41
LINC01006-202ENST00000418309 BCAS1O75363 584 aaPredicted RBP12.5□□□□□ -0.41
LINC01006-202ENST00000418309 IGHV3-9P01782 118 aa12.5□□□□□ -0.41
LINC01006-202ENST00000418309 GUSBP08236 651 aa12.5□□□□□ -0.41
LINC01006-202ENST00000418309 GGT1P19440 569 aa12.5□□□□□ -0.41
LINC01006-202ENST00000418309 IGHV1-2P23083 117 aa12.5□□□□□ -0.41
LINC01006-202ENST00000418309 EDNRAP25101 427 aa12.5□□□□□ -0.41
LINC01006-202ENST00000418309 IDUAP35475 653 aa12.5□□□□□ -0.41
LINC01006-202ENST00000418309 CDKN1AP38936 164 aa12.5□□□□□ -0.41
LINC01006-202ENST00000418309 IDH2P48735 452 aaKnown RBP12.5□□□□□ -0.41
LINC01006-202ENST00000418309 CHRNEQ04844 493 aa12.5□□□□□ -0.41
LINC01006-202ENST00000418309 VEZF1Q14119 521 aa12.5□□□□□ -0.41
LINC01006-202ENST00000418309 CLEC12BQ2HXU8 276 aa12.5□□□□□ -0.41
LINC01006-202ENST00000418309 CEP85LQ5SZL2 805 aa12.5□□□□□ -0.41
LINC01006-202ENST00000418309 FRRS1Q6ZNA5 592 aa12.5□□□□□ -0.41
LINC01006-202ENST00000418309 GRINAQ7Z429 371 aa12.5□□□□□ -0.41
LINC01006-202ENST00000418309 RNF130Q86XS8 419 aa12.5□□□□□ -0.41
LINC01006-202ENST00000418309 KBTBD8Q8NFY9 601 aa12.5□□□□□ -0.41
LINC01006-202ENST00000418309 OIT3Q8WWZ8 545 aa12.5□□□□□ -0.41
LINC01006-202ENST00000418309 CCDC106Q9BWC9 280 aa12.5□□□□□ -0.41
LINC01006-202ENST00000418309 PARD6BQ9BYG5 372 aa12.5□□□□□ -0.41
LINC01006-202ENST00000418309 SAP130Q9H0E3 1048 aa12.5□□□□□ -0.41
LINC01006-202ENST00000418309 ALG2Q9H553 416 aa12.5□□□□□ -0.41
LINC01006-202ENST00000418309 MEAF6Q9HAF1 191 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms