RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 SLC25A43Q8WUT9 341 aaPredicted RBP7.67□□□□□ -1.18
TRIM48-201ENST00000417545 CANT1Q8WVQ1 401 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 FAR1Q8WVX9 515 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 ABTB1Q969K4 478 aaPredicted RBP7.67□□□□□ -1.18
TRIM48-201ENST00000417545 UTP4Q969X6 686 aaKnown RBP7.67□□□□□ -1.18
TRIM48-201ENST00000417545 SNRNP40Q96DI7 357 aaKnown RBP7.67□□□□□ -1.18
TRIM48-201ENST00000417545 GPR137Q96N19 417 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 ZNF300Q96RE9 604 aaPredicted RBP7.67□□□□□ -1.18
TRIM48-201ENST00000417545 TAPBPLQ9BX59 468 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 AMBRA1Q9C0C7 1298 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 UBQLN3Q9H347 655 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 TMEM185BQ9H7F4 350 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 REEP1Q9H902 201 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 ACKR4Q9NPB9 350 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 ASF1BQ9NVP2 202 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 ALKBH4Q9NXW9 302 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 CHRNA9Q9UGM1 479 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 RIMS3Q9UJD0 308 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 SLC7A7Q9UM01 511 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 NTNG1Q9Y2I2 539 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 TMED7Q9Y3B3 224 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 CHST2Q9Y4C5 530 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 TESMINQ9Y4I5 508 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 LIPGQ9Y5X9 500 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 HEATR5AQ86XA9 2040 aa7.67□□□□□ -1.18
TRIM48-201ENST00000417545 ZFHX4Q86UP3 3567 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 CFAP47Q6ZTR5 3102 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 CNTRLQ7Z7A1 2325 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 TCRBV3S1A0A5B6 114 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 C7orf72A4D263 438 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 J3KTA2 159 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 EIF1AYO14602 144 aaKnown RBP7.66□□□□□ -1.18
TRIM48-201ENST00000417545 HNRNPRO43390 633 aaKnown RBP7.66□□□□□ -1.18
TRIM48-201ENST00000417545 FKBP6O75344 327 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 DEAF1O75398 565 aaPredicted RBP7.66□□□□□ -1.18
TRIM48-201ENST00000417545 AHSA1O95433 338 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 EPPINO95925 133 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 ACTL6AO96019 429 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 TPOP07202 933 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 H1F0P07305 194 aaKnown RBP7.66□□□□□ -1.18
TRIM48-201ENST00000417545 THRBP10828 461 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 CHMP24386 653 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 FKBP2P26885 142 aaKnown RBP7.66□□□□□ -1.18
TRIM48-201ENST00000417545 HTR2AP28223 471 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 RRM2P31350 389 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 MLLT10P55197 1068 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 CDH12P55289 794 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 ACTR3P61158 418 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 VLDLRP98155 873 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 SRYQ05066 204 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 PIN1Q13526 163 aaPredicted RBP7.66□□□□□ -1.18
TRIM48-201ENST00000417545 CCNIQ14094 377 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 NPTX1Q15818 432 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 SGCBQ16585 318 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 PRR30Q53SZ7 412 aaPredicted RBP7.66□□□□□ -1.18
TRIM48-201ENST00000417545 CMPK2Q5EBM0 449 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 RNFT1Q5M7Z0 435 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 SWT1Q5T5J6 900 aaKnown RBP7.66□□□□□ -1.18
TRIM48-201ENST00000417545 ZNF730Q6ZMV8 503 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 TRILQ7L0X0 811 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 COMTD1Q86VU5 262 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 PM20D2Q8IYS1 436 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 ADGRG5Q8IZF4 528 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 CDK20Q8IZL9 346 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 LILRA2Q8N149 483 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 LSMEM1Q8N8F7 131 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 OR4D11Q8NGI4 311 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 SLC38A4Q969I6 547 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 RELTQ969Z4 430 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 C3orf49Q96BT1 292 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 SDCCAG3Q96C92 435 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 ZHX1-C8orf76Q96EF9 292 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 MPP4Q96JB8 637 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 OR5B2Q96R09 309 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 EPYCQ99645 322 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 PIP5K1AQ99755 562 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 PRR14Q9BWN1 585 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 CHID1Q9BWS9 393 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 PRRG4Q9BZD6 226 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 ZDHHC11Q9H8X9 412 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 IL1RAPQ9NPH3 570 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 TIGARQ9NQ88 270 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 RHCGQ9UBD6 479 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 OSGIN1Q9UJX0 560 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 AP4S1Q9Y587 144 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 HRH3Q9Y5N1 445 aa7.66□□□□□ -1.18
TRIM48-201ENST00000417545 A0A0B4J2E0 115 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 A0A1B0GTH9 108 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 A0A1B0GX12 115 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 A8MVM7 634 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 NPIPA2E9PIF3 369 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 NPIPA3F8WFD2 350 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 TNFRSF11BO00300 401 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 KPNA4O00629 521 aaPredicted RBP7.65□□□□□ -1.18
TRIM48-201ENST00000417545 AQP7O14520 342 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 PRRG2O14669 202 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 ADAM10O14672 748 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 BCKDKO14874 412 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 ZIC3O60481 467 aa7.65□□□□□ -1.18
TRIM48-201ENST00000417545 TIPRLO75663 272 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms