RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 ETV6P41212 452 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 RPP38P78345 283 aaKnown RBP13.31□□□□□ -0.28
SGCE-202ENST00000415788 ARG2P78540 354 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 OC90Q02509 493 aaPredicted RBP13.31□□□□□ -0.28
SGCE-202ENST00000415788 TBCEQ15813 527 aaPredicted RBP13.31□□□□□ -0.28
SGCE-202ENST00000415788 LINC00303Q3SY05 128 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 COLEC12Q5KU26 742 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 GCNT6Q5T4J0 391 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 C6orf183Q5T699 404 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 NUP54Q7Z3B4 507 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 GALNT5Q7Z7M9 940 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 ABHD17AQ96GS6 310 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 COL21A1Q96P44 957 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 TRNT1Q96Q11 434 aaKnown RBP13.31□□□□□ -0.28
SGCE-202ENST00000415788 SECISBP2Q96T21 854 aaKnown RBP13.31□□□□□ -0.28
SGCE-202ENST00000415788 TMEM38AQ9H6F2 299 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 IL1RAPQ9NPH3 570 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 CALML5Q9NZT1 146 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 U3KQV3 271 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 FRYQ5TBA9 3013 aa13.31□□□□□ -0.28
SGCE-202ENST00000415788 TPRP12270 2363 aaKnown RBP13.3□□□□□ -0.28
SGCE-202ENST00000415788 ERVH48-1M5A8F1 160 aa13.3□□□□□ -0.28
SGCE-202ENST00000415788 TP53I11O14683 189 aa13.3□□□□□ -0.28
SGCE-202ENST00000415788 TSPAN2O60636 221 aa13.3□□□□□ -0.28
SGCE-202ENST00000415788 DPM1O60762 260 aa13.3□□□□□ -0.28
SGCE-202ENST00000415788 CD96P40200 585 aa13.3□□□□□ -0.28
SGCE-202ENST00000415788 PPP1R8Q12972 351 aaKnown RBP13.3□□□□□ -0.28
SGCE-202ENST00000415788 DESI1Q6ICB0 168 aa13.3□□□□□ -0.28
SGCE-202ENST00000415788 ZNF544Q6NX49 715 aa13.3□□□□□ -0.28
SGCE-202ENST00000415788 IL20RBQ6UXL0 311 aa13.3□□□□□ -0.28
SGCE-202ENST00000415788 RTL4Q6ZR62 310 aa13.3□□□□□ -0.28
SGCE-202ENST00000415788 PRR22Q8IZ63 422 aa13.3□□□□□ -0.28
SGCE-202ENST00000415788 CYP4Z2PQ8N1L4 340 aa13.3□□□□□ -0.28
SGCE-202ENST00000415788 ZADH2Q8N4Q0 377 aa13.3□□□□□ -0.28
SGCE-202ENST00000415788 TMCO6Q96DC7 493 aa13.3□□□□□ -0.28
SGCE-202ENST00000415788 SNX18Q96RF0 628 aa13.3□□□□□ -0.28
SGCE-202ENST00000415788 NDEL1Q9GZM8 345 aa13.3□□□□□ -0.28
SGCE-202ENST00000415788 TP63Q9H3D4 680 aaPredicted RBP13.3□□□□□ -0.28
SGCE-202ENST00000415788 A4GALTQ9NPC4 353 aa13.3□□□□□ -0.28
SGCE-202ENST00000415788 PLCXD1Q9NUJ7 323 aa13.3□□□□□ -0.28
SGCE-202ENST00000415788 LRFN1Q9P244 771 aa13.3□□□□□ -0.28
SGCE-202ENST00000415788 RPS6KA6Q9UK32 745 aa13.3□□□□□ -0.28
SGCE-202ENST00000415788 RNF6Q9Y252 685 aa13.3□□□□□ -0.28
SGCE-202ENST00000415788 KCNE3Q9Y6H6 103 aa13.3□□□□□ -0.28
SGCE-202ENST00000415788 NUP214P35658 2090 aaPredicted RBP13.3□□□□□ -0.28
SGCE-202ENST00000415788 ANKRD34BA5PLL1 514 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 E9PQ18 207 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 LOC110117498-PIK3R3F6TDL0 507 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 IDH3BO43837 385 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 STX11O75558 287 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 NR2F1P10589 423 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 CRISP3P54108 245 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 RBBP4Q09028 425 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 ZNF630Q2M218 657 aaPredicted RBP13.29□□□□□ -0.28
SGCE-202ENST00000415788 AGAP6Q5VW22 663 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 PRAMEF8Q5VWM4 474 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 RSBN1Q5VWQ0 802 aaPredicted RBP13.29□□□□□ -0.28
SGCE-202ENST00000415788 PRAMEF7Q5VXH5 474 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 FIGNL1Q6PIW4 674 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 CCDC103Q8IW40 242 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 C9orf43Q8TAL5 461 aaPredicted RBP13.29□□□□□ -0.28
SGCE-202ENST00000415788 OIT3Q8WWZ8 545 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 PMM1Q92871 262 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 RPL3LQ92901 407 aaKnown RBP13.29□□□□□ -0.28
SGCE-202ENST00000415788 MYDGFQ969H8 173 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 ADOQ96SZ5 270 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 SDF2Q99470 211 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 ZNF350Q9GZX5 532 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 ZBTB20Q9HC78 741 aaPredicted RBP13.29□□□□□ -0.28
SGCE-202ENST00000415788 VNN3Q9NY84 501 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 ZNF221Q9UK13 617 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 MED13Q9UHV7 2174 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 CCNKO75909 580 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 FAM87AP0C7U9 286 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 RFX3P48380 749 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 TEKQ02763 1124 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 OR1C1Q15619 314 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 GPAT3Q53EU6 434 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 ZNF468Q5VIY5 522 aaPredicted RBP13.29□□□□□ -0.28
SGCE-202ENST00000415788 ERICH5Q6P6B1 374 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 CCBE1Q6UXH8 406 aaPredicted RBP13.29□□□□□ -0.28
SGCE-202ENST00000415788 SLC30A8Q8IWU4 369 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 C11orf65Q8NCR3 313 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 SLC38A5Q8WUX1 472 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 WBP1Q96G27 269 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 CCDC32Q9BV29 185 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 KRT84Q9NSB2 600 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 ANKRD10Q9NXR5 420 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 KIF17Q9P2E2 1029 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 GRIP1Q9Y3R0 1128 aa13.29□□□□□ -0.28
SGCE-202ENST00000415788 SLC28A2O43868 658 aa13.28□□□□□ -0.28
SGCE-202ENST00000415788 IGKV1D-16P01601 117 aa13.28□□□□□ -0.28
SGCE-202ENST00000415788 FABP3P05413 133 aa13.28□□□□□ -0.28
SGCE-202ENST00000415788 LCKP06239 509 aa13.28□□□□□ -0.28
SGCE-202ENST00000415788 ARAFP10398 606 aa13.28□□□□□ -0.28
SGCE-202ENST00000415788 NR4A2P43354 598 aa13.28□□□□□ -0.28
SGCE-202ENST00000415788 FBXW4P57775 412 aa13.28□□□□□ -0.28
SGCE-202ENST00000415788 IL1RL1Q01638 556 aa13.28□□□□□ -0.28
SGCE-202ENST00000415788 CCNJQ5T5M9 372 aa13.28□□□□□ -0.28
SGCE-202ENST00000415788 TMEM81Q6P7N7 255 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms