RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 SLC25A43Q8WUT9 341 aaPredicted RBP13.52□□□□□ -0.25
DDX56-202ENST00000415758 APH1AQ96BI3 265 aa13.52□□□□□ -0.25
DDX56-202ENST00000415758 SDF2Q99470 211 aa13.52□□□□□ -0.25
DDX56-202ENST00000415758 NMUR2Q9GZQ4 415 aa13.52□□□□□ -0.25
DDX56-202ENST00000415758 SERINC1Q9NRX5 453 aa13.52□□□□□ -0.25
DDX56-202ENST00000415758 ASB6Q9NWX5 421 aa13.52□□□□□ -0.25
DDX56-202ENST00000415758 NOSIPQ9Y314 301 aaKnown RBP13.52□□□□□ -0.25
DDX56-202ENST00000415758 DNAJC15Q9Y5T4 150 aa13.52□□□□□ -0.25
DDX56-202ENST00000415758 PMF1-BGLAPU3KQ54 211 aa13.52□□□□□ -0.25
DDX56-202ENST00000415758 SERINC4A6NH21 518 aa13.51□□□□□ -0.25
DDX56-202ENST00000415758 CCT8L1PA6NM43 557 aa13.51□□□□□ -0.25
DDX56-202ENST00000415758 PDLIM1O00151 329 aa13.51□□□□□ -0.25
DDX56-202ENST00000415758 GPR171O14626 319 aa13.51□□□□□ -0.25
DDX56-202ENST00000415758 SCAMP2O15127 329 aaKnown RBP13.51□□□□□ -0.25
DDX56-202ENST00000415758 URI1O94763 535 aaPredicted RBP13.51□□□□□ -0.25
DDX56-202ENST00000415758 IGHV3-9P01782 118 aa13.51□□□□□ -0.25
DDX56-202ENST00000415758 LINC00032P0C843 101 aa13.51□□□□□ -0.25
DDX56-202ENST00000415758 LAMP1P11279 417 aa13.51□□□□□ -0.25
DDX56-202ENST00000415758 CPA3P15088 417 aa13.51□□□□□ -0.25
DDX56-202ENST00000415758 APOBEC3AP31941 199 aaPredicted RBP13.51□□□□□ -0.25
DDX56-202ENST00000415758 CCT5P48643 541 aa13.51□□□□□ -0.25
DDX56-202ENST00000415758 SLC16A1P53985 500 aa13.51□□□□□ -0.25
DDX56-202ENST00000415758 CHRNEQ04844 493 aa13.51□□□□□ -0.25
DDX56-202ENST00000415758 SKP2Q13309 424 aa13.51□□□□□ -0.25
DDX56-202ENST00000415758 TP53BP2Q13625 1128 aa13.51□□□□□ -0.25
DDX56-202ENST00000415758 ZNF141Q15928 474 aa13.51□□□□□ -0.25
DDX56-202ENST00000415758 LIPMQ5VYY2 423 aa13.51□□□□□ -0.25
DDX56-202ENST00000415758 FAM166AQ6J272 317 aa13.51□□□□□ -0.25
DDX56-202ENST00000415758 UBE2J2Q8N2K1 259 aa13.51□□□□□ -0.25
DDX56-202ENST00000415758 TMCO5AQ8N6Q1 288 aa13.51□□□□□ -0.25
DDX56-202ENST00000415758 ZNF614Q8N883 585 aa13.51□□□□□ -0.25
DDX56-202ENST00000415758 OR7A2PQ8NGA2 310 aa13.51□□□□□ -0.25
DDX56-202ENST00000415758 RFWD2Q8NHY2 731 aa13.51□□□□□ -0.25
DDX56-202ENST00000415758 TMEM234Q8WY98 164 aa13.51□□□□□ -0.25
DDX56-202ENST00000415758 MOAP1Q96BY2 351 aa13.51□□□□□ -0.25
DDX56-202ENST00000415758 TRMOQ9BU70 441 aa13.51□□□□□ -0.25
DDX56-202ENST00000415758 THUMPD3Q9BV44 507 aaKnown RBP13.51□□□□□ -0.25
DDX56-202ENST00000415758 QRSL1Q9H0R6 528 aaKnown RBP13.51□□□□□ -0.25
DDX56-202ENST00000415758 ACER3Q9NUN7 267 aa13.51□□□□□ -0.25
DDX56-202ENST00000415758 KCNS2Q9ULS6 477 aa13.51□□□□□ -0.25
DDX56-202ENST00000415758 SLC35F4A4IF30 521 aa13.5□□□□□ -0.25
DDX56-202ENST00000415758 TMEM114B3SHH9 223 aa13.5□□□□□ -0.25
DDX56-202ENST00000415758 HAX1O00165 279 aa13.5□□□□□ -0.25
DDX56-202ENST00000415758 NDUFS8O00217 210 aa13.5□□□□□ -0.25
DDX56-202ENST00000415758 DNPH1O43598 174 aa13.5□□□□□ -0.25
DDX56-202ENST00000415758 CHEK2O96017 543 aa13.5□□□□□ -0.25
DDX56-202ENST00000415758 FGF4P08620 206 aa13.5□□□□□ -0.25
DDX56-202ENST00000415758 ITGA5P08648 1049 aa13.5□□□□□ -0.25
DDX56-202ENST00000415758 FKBP2P26885 142 aaKnown RBP13.5□□□□□ -0.25
DDX56-202ENST00000415758 CRHR1P34998 444 aa13.5□□□□□ -0.25
DDX56-202ENST00000415758 HPCAL1P37235 193 aa13.5□□□□□ -0.25
DDX56-202ENST00000415758 SWI5Q1ZZU3 235 aa13.5□□□□□ -0.25
DDX56-202ENST00000415758 LSM12Q3MHD2 195 aaKnown RBP13.5□□□□□ -0.25
DDX56-202ENST00000415758 UGT3A2Q3SY77 523 aa13.5□□□□□ -0.25
DDX56-202ENST00000415758 FAM120AOSQ5T036 256 aa13.5□□□□□ -0.25
DDX56-202ENST00000415758 PDZK1Q5T2W1 519 aa13.5□□□□□ -0.25
DDX56-202ENST00000415758 KANK2Q63ZY3 851 aa13.5□□□□□ -0.25
DDX56-202ENST00000415758 C17orf78Q8N4C9 275 aa13.5□□□□□ -0.25
DDX56-202ENST00000415758 WDR31Q8NA23 367 aa13.5□□□□□ -0.25
DDX56-202ENST00000415758 SFXN5Q8TD22 340 aa13.5□□□□□ -0.25
DDX56-202ENST00000415758 ANP32BQ92688 251 aaKnown RBP13.5□□□□□ -0.25
DDX56-202ENST00000415758 COQ8BQ96D53 544 aa13.5□□□□□ -0.25
DDX56-202ENST00000415758 OR7D2Q96RA2 312 aa13.5□□□□□ -0.25
DDX56-202ENST00000415758 FKRPQ9H9S5 495 aa13.5□□□□□ -0.25
DDX56-202ENST00000415758 TBK1Q9UHD2 729 aa13.5□□□□□ -0.25
DDX56-202ENST00000415758 KCNE5Q9UJ90 142 aa13.5□□□□□ -0.25
DDX56-202ENST00000415758 A0A1W2PR80 420 aa13.49□□□□□ -0.25
DDX56-202ENST00000415758 DUXAA6NLW8 204 aa13.49□□□□□ -0.25
DDX56-202ENST00000415758 M0R1B8 84 aa13.49□□□□□ -0.25
DDX56-202ENST00000415758 MRPL33O75394 65 aaKnown RBP13.49□□□□□ -0.25
DDX56-202ENST00000415758 PMS2P2O95744 297 aa13.49□□□□□ -0.25
DDX56-202ENST00000415758 PGCP20142 388 aa13.49□□□□□ -0.25
DDX56-202ENST00000415758 APOBEC1P41238 236 aaKnown RBP13.49□□□□□ -0.25
DDX56-202ENST00000415758 NR4A2P43354 598 aa13.49□□□□□ -0.25
DDX56-202ENST00000415758 CCR4P51679 360 aa13.49□□□□□ -0.25
DDX56-202ENST00000415758 MERTKQ12866 999 aa13.49□□□□□ -0.25
DDX56-202ENST00000415758 MST1LQ2TV78 715 aa13.49□□□□□ -0.25
DDX56-202ENST00000415758 GALNTL6Q49A17 601 aa13.49□□□□□ -0.25
DDX56-202ENST00000415758 AP1ARQ63HQ0 302 aa13.49□□□□□ -0.25
DDX56-202ENST00000415758 C1orf162Q8NEQ5 155 aaPredicted RBP13.49□□□□□ -0.25
DDX56-202ENST00000415758 PIGXQ8TBF5 258 aa13.49□□□□□ -0.25
DDX56-202ENST00000415758 MSI2Q96DH6 328 aaKnown RBP13.49□□□□□ -0.25
DDX56-202ENST00000415758 ZHX1-C8orf76Q96EF9 292 aa13.49□□□□□ -0.25
DDX56-202ENST00000415758 CCDC106Q9BWC9 280 aa13.49□□□□□ -0.25
DDX56-202ENST00000415758 PRR14Q9BWN1 585 aa13.49□□□□□ -0.25
DDX56-202ENST00000415758 TXLNGYQ9BZA5 131 aa13.49□□□□□ -0.25
DDX56-202ENST00000415758 ATAD3AQ9NVI7 634 aa13.49□□□□□ -0.25
DDX56-202ENST00000415758 DCTN4Q9UJW0 460 aa13.49□□□□□ -0.25
DDX56-202ENST00000415758 HDGFL3Q9Y3E1 203 aa13.49□□□□□ -0.25
DDX56-202ENST00000415758 LOC100289279A0A1B0GTE1 492 aa13.48□□□□□ -0.25
DDX56-202ENST00000415758 FCMRO60667 390 aa13.48□□□□□ -0.25
DDX56-202ENST00000415758 STX11O75558 287 aa13.48□□□□□ -0.25
DDX56-202ENST00000415758 LYPLA1O75608 230 aaPredicted RBP13.48□□□□□ -0.25
DDX56-202ENST00000415758 UGT2B17O75795 530 aa13.48□□□□□ -0.25
DDX56-202ENST00000415758 LY6HO94772 140 aa13.48□□□□□ -0.25
DDX56-202ENST00000415758 C6orf47O95873 294 aa13.48□□□□□ -0.25
DDX56-202ENST00000415758 AK1P00568 194 aa13.48□□□□□ -0.25
DDX56-202ENST00000415758 CSTAP01040 98 aa13.48□□□□□ -0.25
DDX56-202ENST00000415758 GUSBP08236 651 aa13.48□□□□□ -0.25
DDX56-202ENST00000415758 MAPK1P28482 360 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms