RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 GRINAQ7Z429 371 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 LURAP1LQ8IV03 231 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 ZNF440Q8IYI8 595 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 SLC43A2Q8N370 569 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 FAM71CQ8NEG0 241 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 OR52P1PQ8NH57 321 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 SLC25A43Q8WUT9 341 aaPredicted RBP10.02□□□□□ -0.81
RFFL-204ENST00000414419 SLC38A5Q8WUX1 472 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 CNOT9Q92600 299 aaKnown RBP10.02□□□□□ -0.81
RFFL-204ENST00000414419 SIKE1Q9BRV8 207 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 MED18Q9BUE0 208 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 SRXN1Q9BYN0 137 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 KLHL4Q9C0H6 718 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 PAIP1Q9H074 479 aaKnown RBP10.02□□□□□ -0.81
RFFL-204ENST00000414419 C12orf49Q9H741 205 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 NPHS2Q9NP85 383 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 PLSCR4Q9NRQ2 329 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 TMEM45AQ9NWC5 275 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 ZNF226Q9NYT6 803 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 DCTN4Q9UJW0 460 aa10.02□□□□□ -0.81
RFFL-204ENST00000414419 A0A0G2JND7 137 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 A0A0G2JPF8 293 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 CFAP73A6NFT4 308 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 HNRNPCL2B2RXH8 293 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 HNRNPCL3B7ZW38 293 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 SULT2B1O00204 365 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 HNRNPCL1O60812 293 aaKnown RBP10.01□□□□□ -0.81
RFFL-204ENST00000414419 EDF1O60869 148 aaKnown RBP10.01□□□□□ -0.81
RFFL-204ENST00000414419 BCAS1O75363 584 aaPredicted RBP10.01□□□□□ -0.81
RFFL-204ENST00000414419 TFPTP0C1Z6 253 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 HNRNPCL4P0DMR1 293 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 PPIBP23284 216 aaKnown RBP10.01□□□□□ -0.81
RFFL-204ENST00000414419 AGTR1P30556 359 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 UGT2B10P36537 528 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 COPZ1P61923 177 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 ZSWIM7Q19AV6 140 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 LIN52Q52LA3 116 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 SYT14P1Q58G82 188 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 MRPL2Q5T653 305 aaKnown RBP10.01□□□□□ -0.81
RFFL-204ENST00000414419 FUNDC1Q8IVP5 155 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 TUSC5Q8IXB3 177 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 RNF128Q8TEB7 428 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 ABHD3Q8WU67 409 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 STON2Q8WXE9 905 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 ZNF524Q96C55 264 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 ZHX1-C8orf76Q96EF9 292 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 TMEM19Q96HH6 336 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 TACO1Q9BSH4 297 aaKnown RBP10.01□□□□□ -0.81
RFFL-204ENST00000414419 COQ10BQ9H8M1 238 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 GP6Q9HCN6 339 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 CTPS2Q9NRF8 586 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 KLHL28Q9NXS3 571 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 KLHL9Q9P2J3 617 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 CHRNA9Q9UGM1 479 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 CORO2BQ9UQ03 480 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 IFT52Q9Y366 437 aa10.01□□□□□ -0.81
RFFL-204ENST00000414419 IGHV3-15A0A0B4J1V0 119 aa10□□□□□ -0.81
RFFL-204ENST00000414419 A0A1W2PP18 115 aa10□□□□□ -0.81
RFFL-204ENST00000414419 FAM221AA4D161 298 aa10□□□□□ -0.81
RFFL-204ENST00000414419 EVPLLA8MZ36 301 aa10□□□□□ -0.81
RFFL-204ENST00000414419 YES1P07947 543 aa10□□□□□ -0.81
RFFL-204ENST00000414419 CCNA2P20248 432 aa10□□□□□ -0.81
RFFL-204ENST00000414419 RPS4Y1P22090 263 aaKnown RBP10□□□□□ -0.81
RFFL-204ENST00000414419 CLK1P49759 484 aaKnown RBP10□□□□□ -0.81
RFFL-204ENST00000414419 DIO1P49895 249 aa10□□□□□ -0.81
RFFL-204ENST00000414419 POLR2HP52434 150 aaKnown RBP10□□□□□ -0.81
RFFL-204ENST00000414419 RASGEF1BQ0VAM2 473 aa10□□□□□ -0.81
RFFL-204ENST00000414419 RPS26P11Q5JNZ5 115 aaPredicted RBP10□□□□□ -0.81
RFFL-204ENST00000414419 LRIF1Q5T3J3 769 aa10□□□□□ -0.81
RFFL-204ENST00000414419 TMPPEQ6ZT21 453 aa10□□□□□ -0.81
RFFL-204ENST00000414419 VRK2Q86Y07 508 aa10□□□□□ -0.81
RFFL-204ENST00000414419 CDC20BQ86Y33 519 aa10□□□□□ -0.81
RFFL-204ENST00000414419 NRGNQ92686 78 aa10□□□□□ -0.81
RFFL-204ENST00000414419 DDIT4LQ96D03 193 aa10□□□□□ -0.81
RFFL-204ENST00000414419 WFIKKN1Q96NZ8 548 aa10□□□□□ -0.81
RFFL-204ENST00000414419 CCDC106Q9BWC9 280 aa10□□□□□ -0.81
RFFL-204ENST00000414419 KLHL13Q9P2N7 655 aa10□□□□□ -0.81
RFFL-204ENST00000414419 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10□□□□□ -0.81
RFFL-204ENST00000414419 PRDM4Q9UKN5 801 aa10□□□□□ -0.81
RFFL-204ENST00000414419 HDGFL3Q9Y3E1 203 aa10□□□□□ -0.81
RFFL-204ENST00000414419 TESMINQ9Y4I5 508 aa10□□□□□ -0.81
RFFL-204ENST00000414419 TMED7-TICAM2A0A0A6YYA0 188 aa9.99□□□□□ -0.81
RFFL-204ENST00000414419 CDHR4A6H8M9 788 aa9.99□□□□□ -0.81
RFFL-204ENST00000414419 FAAHO00519 579 aa9.99□□□□□ -0.81
RFFL-204ENST00000414419 AP3D1O14617 1153 aa9.99□□□□□ -0.81
RFFL-204ENST00000414419 ANGPT2O15123 496 aa9.99□□□□□ -0.81
RFFL-204ENST00000414419 THBS1P07996 1170 aa9.99□□□□□ -0.81
RFFL-204ENST00000414419 NUDT7P0C024 238 aa9.99□□□□□ -0.81
RFFL-204ENST00000414419 TROVE2P10155 538 aaKnown RBP eCLIP9.99□□□□□ -0.81
RFFL-204ENST00000414419 PPP3CBP16298 524 aa9.99□□□□□ -0.81
RFFL-204ENST00000414419 DNASE1P24855 282 aa9.99□□□□□ -0.81
RFFL-204ENST00000414419 CXCR1P25024 350 aa9.99□□□□□ -0.81
RFFL-204ENST00000414419 TACR3P29371 465 aa9.99□□□□□ -0.81
RFFL-204ENST00000414419 DNAJA1P31689 397 aaKnown RBP9.99□□□□□ -0.81
RFFL-204ENST00000414419 SLC1A3P43003 542 aa9.99□□□□□ -0.81
RFFL-204ENST00000414419 MAP2K6P52564 334 aa9.99□□□□□ -0.81
RFFL-204ENST00000414419 EPS8Q12929 822 aa9.99□□□□□ -0.81
RFFL-204ENST00000414419 POU4F3Q15319 338 aa9.99□□□□□ -0.81
RFFL-204ENST00000414419 MAPK11Q15759 364 aa9.99□□□□□ -0.81
RFFL-204ENST00000414419 ZNF311Q5JNZ3 666 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms