RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 HNRNPCL4P0DMR1 293 aa16.84■□□□□ 0.29
TRIM56-202ENST00000412507 CD8BP10966 210 aa16.84■□□□□ 0.29
TRIM56-202ENST00000412507 BMP2P12643 396 aa16.84■□□□□ 0.29
TRIM56-202ENST00000412507 IDH2P48735 452 aaKnown RBP16.84■□□□□ 0.29
TRIM56-202ENST00000412507 GUCY1A3Q02108 690 aa16.84■□□□□ 0.29
TRIM56-202ENST00000412507 FAM27E3Q08E93 113 aa16.84■□□□□ 0.29
TRIM56-202ENST00000412507 C10orf111Q8N326 155 aa16.84■□□□□ 0.29
TRIM56-202ENST00000412507 ZNF610Q8N9Z0 462 aa16.84■□□□□ 0.29
TRIM56-202ENST00000412507 MAL2Q969L2 176 aa16.84■□□□□ 0.29
TRIM56-202ENST00000412507 REXO5Q96IC2 774 aaKnown RBP16.84■□□□□ 0.29
TRIM56-202ENST00000412507 CCDC106Q9BWC9 280 aa16.84■□□□□ 0.29
TRIM56-202ENST00000412507 RLIMQ9NVW2 624 aa16.84■□□□□ 0.29
TRIM56-202ENST00000412507 TROVE2P10155 538 aaKnown RBP eCLIP16.83■□□□□ 0.28
TRIM56-202ENST00000412507 APOBEC1P41238 236 aaKnown RBP16.83■□□□□ 0.28
TRIM56-202ENST00000412507 LIN52Q52LA3 116 aa16.83■□□□□ 0.28
TRIM56-202ENST00000412507 GTF2IRD2BQ6EKJ0 949 aa16.83■□□□□ 0.28
TRIM56-202ENST00000412507 CGB2Q6NT52 195 aa16.83■□□□□ 0.28
TRIM56-202ENST00000412507 FCRLAQ7L513 359 aa16.83■□□□□ 0.28
TRIM56-202ENST00000412507 GRINAQ7Z429 371 aa16.83■□□□□ 0.28
TRIM56-202ENST00000412507 GTF2IRD2Q86UP8 949 aa16.83■□□□□ 0.28
TRIM56-202ENST00000412507 LSRQ86X29 649 aaPredicted RBP16.83■□□□□ 0.28
TRIM56-202ENST00000412507 OR6K3Q8NGY3 331 aa16.83■□□□□ 0.28
TRIM56-202ENST00000412507 RNF128Q8TEB7 428 aa16.83■□□□□ 0.28
TRIM56-202ENST00000412507 ABHD3Q8WU67 409 aa16.83■□□□□ 0.28
TRIM56-202ENST00000412507 IKZF5Q9H5V7 419 aa16.83■□□□□ 0.28
TRIM56-202ENST00000412507 A4GALTQ9NPC4 353 aa16.83■□□□□ 0.28
TRIM56-202ENST00000412507 MED4Q9NPJ6 270 aa16.83■□□□□ 0.28
TRIM56-202ENST00000412507 GLRX2Q9NS18 164 aa16.83■□□□□ 0.28
TRIM56-202ENST00000412507 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.83■□□□□ 0.28
TRIM56-202ENST00000412507 LEF1Q9UJU2 399 aaPredicted RBP16.83■□□□□ 0.28
TRIM56-202ENST00000412507 ZNF443Q9Y2A4 671 aaPredicted RBP16.83■□□□□ 0.28
TRIM56-202ENST00000412507 IGHV3-15A0A0B4J1V0 119 aa16.82■□□□□ 0.28
TRIM56-202ENST00000412507 CDHR4A6H8M9 788 aa16.82■□□□□ 0.28
TRIM56-202ENST00000412507 CFAP73A6NFT4 308 aa16.82■□□□□ 0.28
TRIM56-202ENST00000412507 CTAG2O75638 210 aa16.82■□□□□ 0.28
TRIM56-202ENST00000412507 VIMP08670 466 aaKnown RBP16.82■□□□□ 0.28
TRIM56-202ENST00000412507 PABPC4LP0CB38 370 aaKnown RBP16.82■□□□□ 0.28
TRIM56-202ENST00000412507 GKN3PP0CG01 181 aa16.82■□□□□ 0.28
TRIM56-202ENST00000412507 EPXP11678 715 aa16.82■□□□□ 0.28
TRIM56-202ENST00000412507 CCNA2P20248 432 aa16.82■□□□□ 0.28
TRIM56-202ENST00000412507 ENPP1P22413 925 aa16.82■□□□□ 0.28
TRIM56-202ENST00000412507 PPIBP23284 216 aaKnown RBP16.82■□□□□ 0.28
TRIM56-202ENST00000412507 CD79BP40259 229 aa16.82■□□□□ 0.28
TRIM56-202ENST00000412507 KCNJ5P48544 419 aa16.82■□□□□ 0.28
TRIM56-202ENST00000412507 RAC3P60763 192 aa16.82■□□□□ 0.28
TRIM56-202ENST00000412507 EPS8Q12929 822 aa16.82■□□□□ 0.28
TRIM56-202ENST00000412507 LARS2Q15031 903 aaKnown RBP16.82■□□□□ 0.28
TRIM56-202ENST00000412507 SYT14P1Q58G82 188 aa16.82■□□□□ 0.28
TRIM56-202ENST00000412507 DLEU7Q6UYE1 221 aa16.82■□□□□ 0.28
TRIM56-202ENST00000412507 ADGRG3Q86Y34 549 aa16.82■□□□□ 0.28
TRIM56-202ENST00000412507 CLIP4Q8N3C7 705 aa16.82■□□□□ 0.28
TRIM56-202ENST00000412507 DNAJA3Q96EY1 480 aa16.82■□□□□ 0.28
TRIM56-202ENST00000412507 GPATCH1Q9BRR8 931 aaKnown RBP16.82■□□□□ 0.28
TRIM56-202ENST00000412507 PLSCR4Q9NRQ2 329 aa16.82■□□□□ 0.28
TRIM56-202ENST00000412507 CHRNA9Q9UGM1 479 aa16.82■□□□□ 0.28
TRIM56-202ENST00000412507 NDUFAF1Q9Y375 327 aa16.82■□□□□ 0.28
TRIM56-202ENST00000412507 SPIN1Q9Y657 262 aaPredicted RBP16.82■□□□□ 0.28
TRIM56-202ENST00000412507 A6NNC1 897 aa16.81■□□□□ 0.28
TRIM56-202ENST00000412507 C5orf58C9J3I9 102 aa16.81■□□□□ 0.28
TRIM56-202ENST00000412507 ANGPT2O15123 496 aa16.81■□□□□ 0.28
TRIM56-202ENST00000412507 ARAFP10398 606 aa16.81■□□□□ 0.28
TRIM56-202ENST00000412507 TFPIP10646 304 aa16.81■□□□□ 0.28
TRIM56-202ENST00000412507 POU2F1P14859 743 aa16.81■□□□□ 0.28
TRIM56-202ENST00000412507 AGTR1P30556 359 aa16.81■□□□□ 0.28
TRIM56-202ENST00000412507 ARFIP2P53365 341 aa16.81■□□□□ 0.28
TRIM56-202ENST00000412507 GCNT6Q5T4J0 391 aa16.81■□□□□ 0.28
TRIM56-202ENST00000412507 PRAMEF8Q5VWM4 474 aa16.81■□□□□ 0.28
TRIM56-202ENST00000412507 PRAMEF7Q5VXH5 474 aa16.81■□□□□ 0.28
TRIM56-202ENST00000412507 METTL21CQ5VZV1 264 aa16.81■□□□□ 0.28
TRIM56-202ENST00000412507 DHDDSQ86SQ9 333 aa16.81■□□□□ 0.28
TRIM56-202ENST00000412507 RETREG3Q86VR2 466 aa16.81■□□□□ 0.28
TRIM56-202ENST00000412507 ZNF440Q8IYI8 595 aa16.81■□□□□ 0.28
TRIM56-202ENST00000412507 NFKBIDQ8NI38 313 aa16.81■□□□□ 0.28
TRIM56-202ENST00000412507 BBS10Q8TAM1 723 aa16.81■□□□□ 0.28
TRIM56-202ENST00000412507 SLC25A43Q8WUT9 341 aaPredicted RBP16.81■□□□□ 0.28
TRIM56-202ENST00000412507 C12orf49Q9H741 205 aa16.81■□□□□ 0.28
TRIM56-202ENST00000412507 CACYBPQ9HB71 228 aaKnown RBP16.81■□□□□ 0.28
TRIM56-202ENST00000412507 BCL2L10Q9HD36 194 aa16.81■□□□□ 0.28
TRIM56-202ENST00000412507 ELOVL5Q9NYP7 299 aa16.81■□□□□ 0.28
TRIM56-202ENST00000412507 ZNF232Q9UNY5 417 aa16.81■□□□□ 0.28
TRIM56-202ENST00000412507 CHST2Q9Y4C5 530 aa16.81■□□□□ 0.28
TRIM56-202ENST00000412507 GMEB1Q9Y692 573 aa16.81■□□□□ 0.28
TRIM56-202ENST00000412507 TMED7-TICAM2A0A0A6YYA0 188 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 FAM221AA4D161 298 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 SH3D21A4FU49 640 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 EVPLLA8MZ36 301 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 SULT2B1O00204 365 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 FAAHO00519 579 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 PRKD3O94806 890 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 PGM3O95394 542 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 THBS1P07996 1170 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 UQCRBP14927 111 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 GPX2P18283 190 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 KLK2P20151 261 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 TACR3P29371 465 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 ACAA2P42765 397 aaKnown RBP16.8■□□□□ 0.28
TRIM56-202ENST00000412507 HTR3AP46098 478 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 DIO1P49895 249 aa16.8■□□□□ 0.28
TRIM56-202ENST00000412507 DAZAP2Q15038 168 aaPredicted RBP16.8■□□□□ 0.28
TRIM56-202ENST00000412507 RNPS1Q15287 305 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms