RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 SYNPOQ8N3V7 929 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 OR51S1Q8NGJ8 323 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 OR9Q1Q8NGQ5 310 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 SP7Q8TDD2 431 aaPredicted RBP4.86□□□□□ -1.63
HERC4-205ENST00000412272 TMEM234Q8WY98 164 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 ADIPOR1Q96A54 375 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 THOC3Q96J01 351 aaKnown RBP4.86□□□□□ -1.63
HERC4-205ENST00000412272 HRASLS5Q96KN8 279 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 NIPSNAP1Q9BPW8 284 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 SLC12A9Q9BXP2 914 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 GPR87Q9BY21 358 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 SLCO5A1Q9H2Y9 848 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 SMURF2Q9HAU4 748 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 WFDC1Q9HC57 220 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 MYNNQ9NPC7 610 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 CNOT2Q9NZN8 540 aaKnown RBP4.86□□□□□ -1.63
HERC4-205ENST00000412272 COMMD3Q9UBI1 195 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 PRODH2Q9UF12 536 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 EXO1Q9UQ84 846 aaKnown RBP4.86□□□□□ -1.63
HERC4-205ENST00000412272 STYXL1Q9Y6J8 313 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 CITO14578 2027 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 A0A087WUJ7 227 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 EDDM13A0A1B0GTR0 161 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 CLCA1A8K7I4 914 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 C5orf58C9J3I9 102 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 EMC8O43402 210 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 RP2O75695 350 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 ANXA9O76027 345 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 ALPIP09923 528 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 ZNF35P13682 527 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 TACR2P21452 398 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 EPHA1P21709 976 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 CCR8P51685 355 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 PNLIPRP2P54317 469 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 ENPP2Q13822 863 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 MELKQ14680 651 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 PYDC2Q56P42 97 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 SLC35E3Q7Z769 313 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 SLC34A3Q8N130 599 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 WDTC1Q8N5D0 677 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 CYB561A3Q8NBI2 242 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 RELL2Q8NC24 303 aaPredicted RBP4.86□□□□□ -1.63
HERC4-205ENST00000412272 OR10H4Q8NGA5 316 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 OR13C8Q8NGS7 320 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 GTPBP3Q969Y2 492 aaKnown RBP4.86□□□□□ -1.63
HERC4-205ENST00000412272 SLC25A46Q96AG3 418 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 TSPAN17Q96FV3 270 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 CPB2Q96IY4 423 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 ADGRG7Q96K78 797 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 MYOCQ99972 504 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 SEC11CQ9BY50 192 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 CSNK1G1Q9HCP0 422 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.86□□□□□ -1.63
HERC4-205ENST00000412272 NDOR1Q9UHB4 597 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 MTCH2Q9Y6C9 303 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 PRSS21Q9Y6M0 314 aa4.86□□□□□ -1.63
HERC4-205ENST00000412272 COL2A1P02458 1487 aaPredicted RBP4.85□□□□□ -1.63
HERC4-205ENST00000412272 PARP14Q460N5 1801 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 A0A0A6YYH2 397 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 A6NJ64 397 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 ZNF724A8MTY0 619 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 SEC14L6B5MCN3 397 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 MDM4O15151 490 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 FAM20BO75063 409 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 SLCO2B1O94956 709 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 WISP3O95389 354 aaPredicted RBP4.85□□□□□ -1.63
HERC4-205ENST00000412272 TRBC1P01850 177 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 VTNP04004 478 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 ALDOBP05062 364 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 INHAP05111 366 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 ANXA2P07355 339 aaKnown RBP4.85□□□□□ -1.63
HERC4-205ENST00000412272 PPP3CBP16298 524 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 UGT2B7P16662 529 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 GABRB1P18505 474 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 FGF7P21781 194 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 BTCP35070 178 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 ZNF616Q08AN1 781 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 ITPK1Q13572 414 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 SMN1Q16637 294 aaKnown RBP4.85□□□□□ -1.63
HERC4-205ENST00000412272 CMC1Q7Z7K0 106 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 HIST3H2BBQ8N257 126 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 FSTL5Q8N475 847 aaPredicted RBP4.85□□□□□ -1.63
HERC4-205ENST00000412272 MRPL43Q8N983 215 aaKnown RBP4.85□□□□□ -1.63
HERC4-205ENST00000412272 OR9Q2Q8NGE9 314 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 OR52B6Q8NGF0 335 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 OR5M8Q8NGP6 311 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 OR11L1Q8NGX0 322 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 GNPDA2Q8TDQ7 276 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 PTPN18Q99952 460 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 RHOJQ9H4E5 214 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 IPPKQ9H8X2 491 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 CBLN4Q9NTU7 201 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 ST3GAL5Q9UNP4 418 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 PSG11Q9UQ72 335 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 TBL2Q9Y4P3 447 aaKnown RBP4.85□□□□□ -1.63
HERC4-205ENST00000412272 SCN9AQ15858 1988 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 C20orf202A1L168 122 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 ZNF587BE7ETH6 402 aa4.85□□□□□ -1.63
HERC4-205ENST00000412272 GALR3O60755 368 aaPredicted RBP4.85□□□□□ -1.63
HERC4-205ENST00000412272 AQP8O94778 261 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms