RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 PCSK6P29122 969 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 ETV5P41161 510 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 ZNF91Q05481 1191 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 NCF4Q15080 339 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 CLEC12AQ5QGZ9 265 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 PAPD4Q6PIY7 484 aaKnown RBP12.9□□□□□ -0.34
LIMS2-206ENST00000409754 HSDL2Q6YN16 418 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 CPEB2Q7Z5Q1 589 aaKnown RBP12.9□□□□□ -0.34
LIMS2-206ENST00000409754 GATSQ8NAP1 163 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 NUBPLQ8TB37 319 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 FANK1Q8TC84 345 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 C3orf49Q96BT1 292 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 YIPF6Q96EC8 236 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 VMP1Q96GC9 406 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 CRELD1Q96HD1 420 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 LRR1Q96L50 414 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 SAMD8Q96LT4 415 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 ZNF582Q96NG8 517 aaPredicted RBP12.9□□□□□ -0.34
LIMS2-206ENST00000409754 LPAR4Q99677 370 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 WDR77Q9BQA1 342 aaPredicted RBP12.9□□□□□ -0.34
LIMS2-206ENST00000409754 BCL7BQ9BQE9 202 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 FUNDC2Q9BWH2 189 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 LAT2Q9GZY6 243 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 OR52D1Q9H346 318 aa12.9□□□□□ -0.34
LIMS2-206ENST00000409754 A0A087WUJ7 227 aa12.89□□□□□ -0.35
LIMS2-206ENST00000409754 SNTNA6NMZ2 147 aa12.89□□□□□ -0.35
LIMS2-206ENST00000409754 EFCAB9A8MZ26 197 aa12.89□□□□□ -0.35
LIMS2-206ENST00000409754 ALG1L2C9J202 215 aa12.89□□□□□ -0.35
LIMS2-206ENST00000409754 SURF4O15260 269 aa12.89□□□□□ -0.35
LIMS2-206ENST00000409754 LCKP06239 509 aa12.89□□□□□ -0.35
LIMS2-206ENST00000409754 KLK3P07288 261 aaPredicted RBP12.89□□□□□ -0.35
LIMS2-206ENST00000409754 DBTP11182 482 aaKnown RBP12.89□□□□□ -0.35
LIMS2-206ENST00000409754 ZNF28P17035 718 aa12.89□□□□□ -0.35
LIMS2-206ENST00000409754 SLC6A8P48029 635 aa12.89□□□□□ -0.35
LIMS2-206ENST00000409754 NRG3P56975 720 aa12.89□□□□□ -0.35
LIMS2-206ENST00000409754 TMEM44Q2T9K0 475 aa12.89□□□□□ -0.35
LIMS2-206ENST00000409754 WBP2NLQ6ICG8 309 aa12.89□□□□□ -0.35
LIMS2-206ENST00000409754 SLC30A6Q6NXT4 461 aa12.89□□□□□ -0.35
LIMS2-206ENST00000409754 SLC43A2Q8N370 569 aa12.89□□□□□ -0.35
LIMS2-206ENST00000409754 GALNT15Q8N3T1 639 aa12.89□□□□□ -0.35
LIMS2-206ENST00000409754 OR52L1Q8NGH7 329 aa12.89□□□□□ -0.35
LIMS2-206ENST00000409754 OR8K3Q8NH51 312 aa12.89□□□□□ -0.35
LIMS2-206ENST00000409754 DEPDC7Q96QD5 511 aa12.89□□□□□ -0.35
LIMS2-206ENST00000409754 UBQLN3Q9H347 655 aa12.89□□□□□ -0.35
LIMS2-206ENST00000409754 GPN2Q9H9Y4 310 aaPredicted RBP12.89□□□□□ -0.35
LIMS2-206ENST00000409754 LIN28AQ9H9Z2 209 aaKnown RBP12.89□□□□□ -0.35
LIMS2-206ENST00000409754 AKAP7Q9P0M2 348 aaPredicted RBP12.89□□□□□ -0.35
LIMS2-206ENST00000409754 GPN3Q9UHW5 284 aaPredicted RBP12.89□□□□□ -0.35
LIMS2-206ENST00000409754 ENPP5Q9UJA9 477 aa12.89□□□□□ -0.35
LIMS2-206ENST00000409754 ICAM5Q9UMF0 924 aa12.89□□□□□ -0.35
LIMS2-206ENST00000409754 CARD8Q9Y2G2 431 aa12.89□□□□□ -0.35
LIMS2-206ENST00000409754 ACACBO00763 2458 aa12.89□□□□□ -0.35
LIMS2-206ENST00000409754 HTR3EA5X5Y0 456 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 OR6C70A6NIJ9 312 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 KDM4EB2RXH2 506 aaPredicted RBP12.88□□□□□ -0.35
LIMS2-206ENST00000409754 PRODHO43272 600 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 OIP5O43482 229 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 MAN1A2O60476 641 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 EIF4E2O60573 245 aaKnown RBP12.88□□□□□ -0.35
LIMS2-206ENST00000409754 HCN1O60741 890 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 PTP4A3O75365 173 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 ATE1O95260 518 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 ADORA3P0DMS8 318 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 SAGP10523 405 aaPredicted RBP12.88□□□□□ -0.35
LIMS2-206ENST00000409754 PNMTP11086 282 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 BMP7P18075 431 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 GRK5P34947 590 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 FXYD6P3P58550 94 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 RNLSQ5VYX0 342 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 BCDIN3DQ7Z5W3 292 aaKnown RBP12.88□□□□□ -0.35
LIMS2-206ENST00000409754 LIN37Q96GY3 246 aaPredicted RBP12.88□□□□□ -0.35
LIMS2-206ENST00000409754 TMEM80Q96HE8 168 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 CMKLR1Q99788 373 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 SLC19A3Q9BZV2 496 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 HHATLQ9HCP6 504 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 MRPS18AQ9NVS2 196 aaKnown RBP12.88□□□□□ -0.35
LIMS2-206ENST00000409754 SLC39A1Q9NY26 324 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 SIGLEC7Q9Y286 467 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 SDK2Q58EX2 2172 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 IRGMA1A4Y4 181 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 ENO4A6NNW6 628 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 PPM1BO75688 479 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 IGF2P01344 180 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 FUT1P19526 365 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 CCNA2P20248 432 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 CRYZQ08257 329 aaKnown RBP12.88□□□□□ -0.35
LIMS2-206ENST00000409754 EFR3AQ14156 821 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 DESI1Q6ICB0 168 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 SMARCD3Q6STE5 483 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 CBLN3Q6UW01 205 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 FAM198BQ6UWH4 519 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 SLC16A12Q6ZSM3 486 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 ZNF367Q7RTV3 350 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 LNX2Q8N448 690 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 ANKK1Q8NFD2 765 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 OR5L2Q8NGL0 311 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 OR13C2Q8NGS9 318 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 SGTBQ96EQ0 304 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 PLEKHA8Q96JA3 519 aa12.88□□□□□ -0.35
LIMS2-206ENST00000409754 MESP1Q9BRJ9 268 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms