RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 IDUAP35475 653 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 FOXL2P58012 376 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 SKP2Q13309 424 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 FCRLBQ6BAA4 426 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 WBP2NLQ6ICG8 309 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 NIPAL3Q6P499 406 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 APOOLQ6UXV4 268 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 PHC2Q8IXK0 858 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 WWTR1Q9GZV5 400 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 MMP27Q9H306 513 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 MCCC2Q9HCC0 563 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 PALMDQ9NP74 551 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 CCDC59Q9P031 241 aaKnown RBP18.98■□□□□ 0.63
USP39-203ENST00000409470 STUB1Q9UNE7 303 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 BAIAP2Q9UQB8 552 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 HEATR5AQ86XA9 2040 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 METTL15A6NJ78 407 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 PRR23D1E9PI22 279 aaPredicted RBP18.98■□□□□ 0.63
USP39-203ENST00000409470 OIP5O43482 229 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 ICOSLGO75144 302 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 TIAF1O95411 115 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 PRR23D2P0DMB1 279 aaPredicted RBP18.98■□□□□ 0.63
USP39-203ENST00000409470 SLC1A3P43003 542 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 KLHL12Q53G59 568 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 MEPCEQ7L2J0 689 aaKnown RBP18.98■□□□□ 0.63
USP39-203ENST00000409470 SLC38A9Q8NBW4 561 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 OR51G2Q8NGK0 314 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 TGIF2Q9GZN2 237 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 TNFRSF10DQ9UBN6 386 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 ICAM5Q9UMF0 924 aa18.98■□□□□ 0.63
USP39-203ENST00000409470 ELOA3DA6NLF2 546 aaPredicted RBP18.97■□□□□ 0.63
USP39-203ENST00000409470 PATE3B3GLJ2 98 aa18.97■□□□□ 0.63
USP39-203ENST00000409470 PPM1BO75688 479 aa18.97■□□□□ 0.63
USP39-203ENST00000409470 CPEP16870 476 aa18.97■□□□□ 0.63
USP39-203ENST00000409470 PLCXD2Q0VAA5 305 aa18.97■□□□□ 0.63
USP39-203ENST00000409470 ELOA3BQ3SY89 546 aa18.97■□□□□ 0.63
USP39-203ENST00000409470 NKAIN1Q4KMZ8 207 aa18.97■□□□□ 0.63
USP39-203ENST00000409470 DESI1Q6ICB0 168 aa18.97■□□□□ 0.63
USP39-203ENST00000409470 CBLN3Q6UW01 205 aa18.97■□□□□ 0.63
USP39-203ENST00000409470 GDPGP1Q6ZNW5 385 aa18.97■□□□□ 0.63
USP39-203ENST00000409470 PSD4Q8NDX1 1056 aa18.97■□□□□ 0.63
USP39-203ENST00000409470 ELOA3Q8NG57 546 aa18.97■□□□□ 0.63
USP39-203ENST00000409470 SECISBP2Q96T21 854 aaKnown RBP18.97■□□□□ 0.63
USP39-203ENST00000409470 C6orf62Q9GZU0 229 aaPredicted RBP18.97■□□□□ 0.63
USP39-203ENST00000409470 EXOSC3Q9NQT5 275 aaKnown RBP18.97■□□□□ 0.63
USP39-203ENST00000409470 ADAMTS9Q9P2N4 1935 aa18.97■□□□□ 0.63
USP39-203ENST00000409470 PNMA8CA0A1B0GUJ8 204 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 OR6C76A6NM76 312 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 ZNF3P17036 446 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 HK1P19367 917 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 CRYBB2P43320 205 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 SLC9A3P48764 834 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 RPS7P62081 194 aaKnown RBP18.96■□□□□ 0.63
USP39-203ENST00000409470 DAB2P98082 770 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 INAQ16352 499 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 PWWP2BQ6NUJ5 590 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 B3GLCTQ6Y288 498 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 PRR23CQ6ZRP0 262 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 IGFN1Q86VF2 1251 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 SLC43A2Q8N370 569 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 IFI44Q8TCB0 444 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 SSR3Q9UNL2 185 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 COL5A1P20908 1838 aaPredicted RBP18.96■□□□□ 0.63
USP39-203ENST00000409470 ZC3H12DA2A288 527 aaKnown RBP18.96■□□□□ 0.63
USP39-203ENST00000409470 NDUFB2O95178 105 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 HEXBP07686 556 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 PNMTP11086 282 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 BMP4P12644 408 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 PEPDP12955 493 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 LCN1P31025 176 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 SOX6P35712 828 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 SLC16A1P53985 500 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 ITGADQ13349 1161 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 PEAR1Q5VY43 1037 aaPredicted RBP18.96■□□□□ 0.63
USP39-203ENST00000409470 KLHL36Q8N4N3 616 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 SIRT6Q8N6T7 355 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 SLC37A3Q8NCC5 494 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 FNDC8Q8TC99 324 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 HCAR1Q9BXC0 346 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 OR51V1Q9H2C8 321 aa18.96■□□□□ 0.63
USP39-203ENST00000409470 IGHV3-20A0A0C4DH32 117 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 LRRN3E7EW58 273 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 TO15178 435 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 IFNGP01579 166 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 IGHA1P01876 353 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 CALRP27797 417 aaKnown RBP18.95■□□□□ 0.62
USP39-203ENST00000409470 CD79BP40259 229 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 FHL1Q13642 323 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 PHF19Q5T6S3 580 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 ARHGAP11AQ6P4F7 1023 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 LRRC17Q8N6Y2 441 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 ZNF563Q8TA94 476 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 TM9SF4Q92544 642 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 UFD1Q92890 307 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 OMA1Q96E52 524 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 ERMAPQ96PL5 475 aaPredicted RBP18.95■□□□□ 0.62
USP39-203ENST00000409470 ARHGAP9Q9BRR9 750 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 CDADC1Q9BWV3 514 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 ASPNQ9BXN1 380 aa18.95■□□□□ 0.62
USP39-203ENST00000409470 ISYNA1Q9NPH2 558 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms