RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 FAM120BQ96EK7 910 aaKnown RBP14.55□□□□□ -0.08
CHMP3-203ENST00000409225 STACQ99469 402 aa14.55□□□□□ -0.08
CHMP3-203ENST00000409225 PIGUQ9H490 435 aa14.55□□□□□ -0.08
CHMP3-203ENST00000409225 GSTO2Q9H4Y5 243 aa14.55□□□□□ -0.08
CHMP3-203ENST00000409225 DUSP22Q9NRW4 184 aa14.55□□□□□ -0.08
CHMP3-203ENST00000409225 SERINC1Q9NRX5 453 aa14.55□□□□□ -0.08
CHMP3-203ENST00000409225 ZCCHC3Q9NUD5 404 aaKnown RBP14.55□□□□□ -0.08
CHMP3-203ENST00000409225 DTNAQ9Y4J8 743 aa14.55□□□□□ -0.08
CHMP3-203ENST00000409225 ESPNB1AK53 854 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 PDLIM1O00151 329 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 GPR171O14626 319 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 ZNF264O43296 627 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 EIF4E2O60573 245 aaKnown RBP14.54□□□□□ -0.08
CHMP3-203ENST00000409225 LILRA1O75019 489 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 CRCPO75575 148 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 CYP7B1O75881 506 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 SNUPNO95149 360 aaKnown RBP14.54□□□□□ -0.08
CHMP3-203ENST00000409225 TACSTD2P09758 323 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 UBL4AP11441 157 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 FRKP42685 505 aaPredicted RBP14.54□□□□□ -0.08
CHMP3-203ENST00000409225 ATP12AP54707 1039 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 CDH15P55291 814 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 MERTKQ12866 999 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 SYT14P1Q58G82 188 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 DCST2Q5T1A1 773 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 CASP12Q6UXS9 341 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 TRIM46Q7Z4K8 759 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 SLC22A9Q8IVM8 553 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 C17orf78Q8N4C9 275 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 CCNYL1Q8N7R7 359 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 CLHC1Q8NHS4 586 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 DCAKDQ8WVC6 231 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 HPS1Q92902 700 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 ZHX1-C8orf76Q96EF9 292 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 L3HYPDHQ96EM0 354 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 THUMPD3Q9BV44 507 aaKnown RBP14.54□□□□□ -0.08
CHMP3-203ENST00000409225 REEP4Q9H6H4 257 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 RRAGDQ9NQL2 400 aaPredicted RBP14.54□□□□□ -0.08
CHMP3-203ENST00000409225 ACSS1Q9NUB1 689 aaPredicted RBP14.54□□□□□ -0.08
CHMP3-203ENST00000409225 UPB1Q9UBR1 384 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 DCTN4Q9UJW0 460 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 KCNE3Q9Y6H6 103 aa14.54□□□□□ -0.08
CHMP3-203ENST00000409225 B9A039 149 aa14.53□□□□□ -0.08
CHMP3-203ENST00000409225 CREB1P16220 341 aa14.53□□□□□ -0.08
CHMP3-203ENST00000409225 GIFP27352 417 aa14.53□□□□□ -0.08
CHMP3-203ENST00000409225 SESN3P58005 492 aa14.53□□□□□ -0.08
CHMP3-203ENST00000409225 LGALS3BPQ08380 585 aa14.53□□□□□ -0.08
CHMP3-203ENST00000409225 CCNIQ14094 377 aa14.53□□□□□ -0.08
CHMP3-203ENST00000409225 VHLLQ6RSH7 139 aa14.53□□□□□ -0.08
CHMP3-203ENST00000409225 CCDC103Q8IW40 242 aa14.53□□□□□ -0.08
CHMP3-203ENST00000409225 PIGXQ8TBF5 258 aa14.53□□□□□ -0.08
CHMP3-203ENST00000409225 ZNF764Q96H86 408 aaPredicted RBP14.53□□□□□ -0.08
CHMP3-203ENST00000409225 TSSK3Q96PN8 268 aa14.53□□□□□ -0.08
CHMP3-203ENST00000409225 KCNS3Q9BQ31 491 aa14.53□□□□□ -0.08
CHMP3-203ENST00000409225 RAB1BQ9H0U4 201 aa14.53□□□□□ -0.08
CHMP3-203ENST00000409225 KCNF1Q9H3M0 494 aa14.53□□□□□ -0.08
CHMP3-203ENST00000409225 SIRT3Q9NTG7 399 aaPredicted RBP14.53□□□□□ -0.08
CHMP3-203ENST00000409225 ZDHHC18Q9NUE0 388 aa14.53□□□□□ -0.08
CHMP3-203ENST00000409225 TMEM89A2RUT3 159 aa14.52□□□□□ -0.09
CHMP3-203ENST00000409225 NPIPB9F8W1W9 429 aa14.52□□□□□ -0.09
CHMP3-203ENST00000409225 KLF11O14901 512 aa14.52□□□□□ -0.09
CHMP3-203ENST00000409225 TBX19O60806 448 aa14.52□□□□□ -0.09
CHMP3-203ENST00000409225 WNT11O96014 354 aa14.52□□□□□ -0.09
CHMP3-203ENST00000409225 OR4A8P0C604 315 aa14.52□□□□□ -0.09
CHMP3-203ENST00000409225 DAOP14920 347 aa14.52□□□□□ -0.09
CHMP3-203ENST00000409225 PCMT1P22061 227 aa14.52□□□□□ -0.09
CHMP3-203ENST00000409225 PPOXP50336 477 aa14.52□□□□□ -0.09
CHMP3-203ENST00000409225 IDH3GP51553 393 aaPredicted RBP14.52□□□□□ -0.09
CHMP3-203ENST00000409225 DVL1P1P54792 670 aaPredicted RBP14.52□□□□□ -0.09
CHMP3-203ENST00000409225 PRPS1P60891 318 aa14.52□□□□□ -0.09
CHMP3-203ENST00000409225 SLC7A5Q01650 507 aa14.52□□□□□ -0.09
CHMP3-203ENST00000409225 KIAA0040Q15053 153 aa14.52□□□□□ -0.09
CHMP3-203ENST00000409225 TRIP10Q15642 601 aa14.52□□□□□ -0.09
CHMP3-203ENST00000409225 PDZK1Q5T2W1 519 aa14.52□□□□□ -0.09
CHMP3-203ENST00000409225 KLHL24Q6TFL4 600 aa14.52□□□□□ -0.09
CHMP3-203ENST00000409225 C1orf162Q8NEQ5 155 aaPredicted RBP14.52□□□□□ -0.09
CHMP3-203ENST00000409225 ADAMTS15Q8TE58 950 aa14.52□□□□□ -0.09
CHMP3-203ENST00000409225 ST8SIA1Q92185 356 aa14.52□□□□□ -0.09
CHMP3-203ENST00000409225 FUT8Q9BYC5 575 aa14.52□□□□□ -0.09
CHMP3-203ENST00000409225 CDC42EP4Q9H3Q1 356 aaKnown RBP14.52□□□□□ -0.09
CHMP3-203ENST00000409225 SLC7A10Q9NS82 523 aa14.52□□□□□ -0.09
CHMP3-203ENST00000409225 CA10Q9NS85 328 aa14.52□□□□□ -0.09
CHMP3-203ENST00000409225 BAIAP2L1Q9UHR4 511 aa14.52□□□□□ -0.09
CHMP3-203ENST00000409225 PTGDR2Q9Y5Y4 395 aa14.52□□□□□ -0.09
CHMP3-203ENST00000409225 IGHV1-18A0A0C4DH31 117 aa14.51□□□□□ -0.09
CHMP3-203ENST00000409225 FAM157AC9JC47 383 aa14.51□□□□□ -0.09
CHMP3-203ENST00000409225 NPIPB8E9PQR5 432 aa14.51□□□□□ -0.09
CHMP3-203ENST00000409225 SNRPAP09012 282 aaKnown RBP14.51□□□□□ -0.09
CHMP3-203ENST00000409225 SDC1P18827 310 aa14.51□□□□□ -0.09
CHMP3-203ENST00000409225 CDH2P19022 906 aaPredicted RBP14.51□□□□□ -0.09
CHMP3-203ENST00000409225 MAGEA8P43361 318 aa14.51□□□□□ -0.09
CHMP3-203ENST00000409225 SLC16A1P53985 500 aa14.51□□□□□ -0.09
CHMP3-203ENST00000409225 TGFBR3Q03167 851 aa14.51□□□□□ -0.09
CHMP3-203ENST00000409225 SKP2Q13309 424 aa14.51□□□□□ -0.09
CHMP3-203ENST00000409225 TP53BP2Q13625 1128 aa14.51□□□□□ -0.09
CHMP3-203ENST00000409225 PDE7AQ13946 482 aa14.51□□□□□ -0.09
CHMP3-203ENST00000409225 ADIPOQQ15848 244 aa14.51□□□□□ -0.09
CHMP3-203ENST00000409225 HIKESHIQ53FT3 197 aa14.51□□□□□ -0.09
CHMP3-203ENST00000409225 PDLIM3Q53GG5 364 aaPredicted RBP14.51□□□□□ -0.09
CHMP3-203ENST00000409225 TSPO2Q5TGU0 170 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms