RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 FAM111BQ6SJ93 734 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 ZNF836Q6ZNA1 936 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 ZNF595Q8IYB9 648 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 NLGN4XQ8N0W4 816 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 MFSD4AQ8N468 514 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 PSD4Q8NDX1 1056 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 ANKK1Q8NFD2 765 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 OR2T33Q8NG76 320 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 OR52I1Q8NGK6 324 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 GPR151Q8TDV0 419 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 PMEPA1Q969W9 287 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 OPALINQ96PE5 141 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 FCRL4Q96PJ5 515 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 OR6C1Q96RD1 312 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 C6orf62Q9GZU0 229 aaPredicted RBP11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 CHRNA10Q9GZZ6 450 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 OR51E2Q9H255 320 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 FN3KQ9H479 309 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 ADAP2Q9NPF8 381 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 NDUFB11Q9NX14 153 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 SLC39A1Q9NY26 324 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 LSM2Q9Y333 95 aaKnown RBP11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 CORINQ9Y5Q5 1042 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 CDH10Q9Y6N8 788 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 SDK2Q58EX2 2172 aa11.89□□□□□ -0.51
SMARCB1-203ENST00000407082 NBPF19A0A087WUL8 3843 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 LOC105369274A0A096LPK9 316 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 LOC102723532A0A0G2JNH3 316 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 UNC119BA6NIH7 251 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 B4E171 279 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 CYR61O00622 381 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 PRKYO43930 277 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 NKX2-2O95096 273 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 APOA1P02647 267 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 CPEP16870 476 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 GNLYP22749 145 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 COL8A1P27658 744 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 GALNSP34059 522 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 ETV6P41212 452 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 TSPAN7P41732 249 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 VSX2P58304 361 aaPredicted RBP11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 MC2RQ01718 297 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 ATP1A4Q13733 1029 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 OXA1LQ15070 435 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 GPR68Q15743 365 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 PRICKLE4Q2TBC4 344 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 TCTE1Q5JU00 501 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 ZNF787Q6DD87 383 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 ACSM5Q6NUN0 579 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 ZNF613Q6PF04 617 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 ZNF550Q7Z398 422 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 GRAMD2AQ8IUY3 354 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 MCATQ8IVS2 390 aaKnown RBP11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 OR4N4Q8N0Y3 316 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 BMPERQ8N8U9 685 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 BRIX1Q8TDN6 353 aaKnown RBP11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 SSC4DQ8WTU2 575 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 UFD1Q92890 307 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 KIAA1143Q96AT1 154 aaPredicted RBP11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 ITPKCQ96DU7 683 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 RNFT2Q96EX2 444 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 OR5M11Q96RB7 305 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 RSPO3Q9BXY4 272 aaPredicted RBP11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 TRIM2Q9C040 744 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 EXOSC4Q9NPD3 245 aaKnown RBP11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 FGF21Q9NSA1 209 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 SIDT1Q9NXL6 827 aaKnown RBP11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 PLCL2Q9UPR0 1127 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 TP53TG5Q9Y2B4 290 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 B3GALT1Q9Y5Z6 326 aa11.88□□□□□ -0.51
SMARCB1-203ENST00000407082 SCN3AQ9NY46 2000 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 FUOMA2VDF0 154 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 TMEM150CB9EJG8 249 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 ZNF670-ZNF695F2Z2N8 137 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 M0R129 80 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 POLR1CO15160 346 aaPredicted RBP11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 HCRTR1O43613 425 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 FCMRO60667 390 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 RAD1O60671 282 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 CTNSO60931 367 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 UPK1BO75841 260 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 IL1AP01583 271 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 MSL3P1P0C860 447 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 RBM34P42696 430 aaKnown RBP11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 CD97P48960 835 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 CDH11P55287 796 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 CDC20Q12834 499 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 ZNF155Q12901 538 aaPredicted RBP11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 FAM53BQ14153 422 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 IL11RAQ14626 422 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 DEFB110Q30KQ9 67 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 PGGHGQ32M88 737 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 NXNL2Q5VZ03 156 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 CMIPQ8IY22 773 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 VWA5B2Q8N398 1253 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 CLIP4Q8N3C7 705 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 AP3S1Q92572 193 aa11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 HOXB13Q92826 284 aaPredicted RBP11.87□□□□□ -0.51
SMARCB1-203ENST00000407082 CTHRC1Q96CG8 243 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms