RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 FOXJ2Q9P0K8 574 aa23.4■■□□□ 1.34
CPNE1-205ENST00000401607 SOCS6O14544 535 aa23.4■■□□□ 1.34
CPNE1-205ENST00000401607 GMFGO60234 142 aa23.4■■□□□ 1.34
CPNE1-205ENST00000401607 CH25HO95992 272 aa23.4■■□□□ 1.34
CPNE1-205ENST00000401607 STSP08842 583 aa23.4■■□□□ 1.34
CPNE1-205ENST00000401607 MLLT10P55197 1068 aa23.4■■□□□ 1.34
CPNE1-205ENST00000401607 EIF3IQ13347 325 aaKnown RBP23.4■■□□□ 1.34
CPNE1-205ENST00000401607 GLRX5Q86SX6 157 aa23.4■■□□□ 1.34
CPNE1-205ENST00000401607 LRR1Q96L50 414 aa23.4■■□□□ 1.34
CPNE1-205ENST00000401607 PRRG3Q9BZD7 231 aa23.4■■□□□ 1.34
CPNE1-205ENST00000401607 RSL24D1Q9UHA3 163 aaKnown RBP23.4■■□□□ 1.34
CPNE1-205ENST00000401607 WDFY3Q8IZQ1 3526 aa23.39■■□□□ 1.34
CPNE1-205ENST00000401607 TRAV27A0A087WT01 109 aa23.39■■□□□ 1.33
CPNE1-205ENST00000401607 A0A1W2PQ72 361 aa23.39■■□□□ 1.33
CPNE1-205ENST00000401607 EFCAB10A6NFE3 127 aa23.39■■□□□ 1.33
CPNE1-205ENST00000401607 SURF4O15260 269 aa23.39■■□□□ 1.33
CPNE1-205ENST00000401607 OR2J2O76002 312 aa23.39■■□□□ 1.33
CPNE1-205ENST00000401607 ADRA2AP08913 450 aa23.39■■□□□ 1.33
CPNE1-205ENST00000401607 CD63P08962 238 aa23.39■■□□□ 1.33
CPNE1-205ENST00000401607 PNMTP11086 282 aa23.39■■□□□ 1.33
CPNE1-205ENST00000401607 GP2P55259 537 aaKnown RBP23.39■■□□□ 1.33
CPNE1-205ENST00000401607 RPS18P62269 152 aaKnown RBP23.39■■□□□ 1.33
CPNE1-205ENST00000401607 ST3GAL4Q11206 333 aa23.39■■□□□ 1.33
CPNE1-205ENST00000401607 FHL1Q13642 323 aa23.39■■□□□ 1.33
CPNE1-205ENST00000401607 TOMM34Q15785 309 aaPredicted RBP23.39■■□□□ 1.33
CPNE1-205ENST00000401607 RPL13AP3Q6NVV1 102 aa23.39■■□□□ 1.33
CPNE1-205ENST00000401607 THSD4Q6ZMP0 1018 aa23.39■■□□□ 1.33
CPNE1-205ENST00000401607 CCDC81Q6ZN84 652 aa23.39■■□□□ 1.33
CPNE1-205ENST00000401607 OR11G2Q8NGC1 345 aa23.39■■□□□ 1.33
CPNE1-205ENST00000401607 OR5W2Q8NH69 310 aa23.39■■□□□ 1.33
CPNE1-205ENST00000401607 ZNF563Q8TA94 476 aa23.39■■□□□ 1.33
CPNE1-205ENST00000401607 RNF138Q8WVD3 245 aa23.39■■□□□ 1.33
CPNE1-205ENST00000401607 ADAM19Q9H013 955 aa23.39■■□□□ 1.33
CPNE1-205ENST00000401607 GPR52Q9Y2T5 361 aa23.39■■□□□ 1.33
CPNE1-205ENST00000401607 ELOA3DA6NLF2 546 aaPredicted RBP23.38■■□□□ 1.33
CPNE1-205ENST00000401607 ZNF99A8MXY4 864 aaPredicted RBP23.38■■□□□ 1.33
CPNE1-205ENST00000401607 BHLHE40O14503 412 aa23.38■■□□□ 1.33
CPNE1-205ENST00000401607 RCBTB2O95199 551 aa23.38■■□□□ 1.33
CPNE1-205ENST00000401607 PIPP12273 146 aaPredicted RBP23.38■■□□□ 1.33
CPNE1-205ENST00000401607 TCN2P20062 427 aa23.38■■□□□ 1.33
CPNE1-205ENST00000401607 SLC1A3P43003 542 aa23.38■■□□□ 1.33
CPNE1-205ENST00000401607 TUBA3CQ13748 450 aa23.38■■□□□ 1.33
CPNE1-205ENST00000401607 EXT1Q16394 746 aa23.38■■□□□ 1.33
CPNE1-205ENST00000401607 ELOA3BQ3SY89 546 aa23.38■■□□□ 1.33
CPNE1-205ENST00000401607 MEDAGQ5VYS4 303 aa23.38■■□□□ 1.33
CPNE1-205ENST00000401607 PLAG1Q6DJT9 500 aa23.38■■□□□ 1.33
CPNE1-205ENST00000401607 SMARCD3Q6STE5 483 aa23.38■■□□□ 1.33
CPNE1-205ENST00000401607 ELOA3Q8NG57 546 aa23.38■■□□□ 1.33
CPNE1-205ENST00000401607 NMD3Q96D46 503 aaKnown RBP23.38■■□□□ 1.33
CPNE1-205ENST00000401607 SGTBQ96EQ0 304 aa23.38■■□□□ 1.33
CPNE1-205ENST00000401607 ZNF582Q96NG8 517 aaPredicted RBP23.38■■□□□ 1.33
CPNE1-205ENST00000401607 SLC19A3Q9BZV2 496 aa23.38■■□□□ 1.33
CPNE1-205ENST00000401607 FAM86C1Q9NVL1 165 aa23.38■■□□□ 1.33
CPNE1-205ENST00000401607 TCFL5Q9UL49 500 aa23.38■■□□□ 1.33
CPNE1-205ENST00000401607 HCN1O60741 890 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 DKK1O94907 266 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 IGHEP01854 428 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 RAB40ALP0C0E4 278 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 ITPKBP27987 946 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 P2RX1P51575 399 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 ZNF91Q05481 1191 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 C3orf38Q5JPI3 329 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 STPG1Q5TH74 334 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 GPR107Q5VW38 600 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 NUP54Q7Z3B4 507 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 STX19Q8N4C7 294 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 OR52L1Q8NGH7 329 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 OR51A7Q8NH64 312 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 TMCO6Q96DC7 493 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 C12orf10Q9HB07 376 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 MMP25Q9NPA2 562 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 LRRN3E7EW58 273 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 MAN1A2O60476 641 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 DBTP11182 482 aaKnown RBP23.37■■□□□ 1.33
CPNE1-205ENST00000401607 BMP7P18075 431 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 ACVR2AP27037 513 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 DCKP27707 260 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 TACR3P29371 465 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 SLC46A3Q7Z3Q1 461 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 OAFQ86UD1 273 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 M1APQ8TC57 530 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 SLC22A8Q8TCC7 542 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 DUSP19Q8WTR2 217 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 TTC9Q92623 222 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 RORBQ92753 470 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 TNFRSF13CQ96RJ3 184 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 RASL10BQ96S79 203 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 TMEM43Q9BTV4 400 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 MCCC2Q9HCC0 563 aa23.37■■□□□ 1.33
CPNE1-205ENST00000401607 FBXO45P0C2W1 286 aa23.36■■□□□ 1.33
CPNE1-205ENST00000401607 PGCP20142 388 aa23.36■■□□□ 1.33
CPNE1-205ENST00000401607 CBFBQ13951 182 aa23.36■■□□□ 1.33
CPNE1-205ENST00000401607 IRF3Q14653 427 aa23.36■■□□□ 1.33
CPNE1-205ENST00000401607 PPP1R32Q7Z5V6 425 aa23.36■■□□□ 1.33
CPNE1-205ENST00000401607 MISPQ8IVT2 679 aa23.36■■□□□ 1.33
CPNE1-205ENST00000401607 ISOC1Q96CN7 298 aa23.36■■□□□ 1.33
CPNE1-205ENST00000401607 TEX12Q9BXU0 123 aa23.36■■□□□ 1.33
CPNE1-205ENST00000401607 MED17Q9NVC6 651 aa23.36■■□□□ 1.33
CPNE1-205ENST00000401607 RPL36Q9Y3U8 105 aaKnown RBP23.36■■□□□ 1.33
CPNE1-205ENST00000401607 KDM4EB2RXH2 506 aaPredicted RBP23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms