RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 TP53I3Q53FA7 332 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 WDR74Q6RFH5 385 aaPredicted RBP1.98□□□□□ -2.09
CD47-203ENST00000398258 TFAP2EQ6VUC0 442 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 DNM1P46Q6ZS02 220 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 ZNF584Q8IVC4 421 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 UBQLNLQ8IYU4 475 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 TMEM123Q8N131 208 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 EIF1ADQ8N9N8 165 aaKnown RBP1.98□□□□□ -2.09
CD47-203ENST00000398258 OR4D9Q8NGE8 314 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 OR51G2Q8NGK0 314 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 FGGYQ96C11 551 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 EFHD2Q96C19 240 aaPredicted RBP1.98□□□□□ -2.09
CD47-203ENST00000398258 SLC25A38Q96DW6 304 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 ZNF184Q99676 751 aaPredicted RBP1.98□□□□□ -2.09
CD47-203ENST00000398258 CCT7Q99832 543 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 EDEM2Q9BV94 578 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 CAPS2Q9BXY5 557 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 VCX2Q9H322 139 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 VCPKMTQ9H867 229 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 SLC17A5Q9NRA2 495 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 ZNF275Q9NSD4 429 aaPredicted RBP1.98□□□□□ -2.09
CD47-203ENST00000398258 IL36GQ9NZH8 169 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 KLHL21Q9UJP4 597 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 PPIAL4AQ9Y536 164 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 ASB3Q9Y575 518 aa1.98□□□□□ -2.09
CD47-203ENST00000398258 ATRXP46100 2492 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 KLF18A0A0U1RQI7 1052 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 A0A0U1RQS6 177 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 EPOPA6NHQ4 379 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 E7ESA3 106 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 NBR2O15453 112 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 FCMRO60667 390 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 HCN1O60741 890 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 GNA14O95837 355 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 IGKV3-15P01624 115 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 LGALS2P05162 132 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 RPS2P15880 293 aaKnown RBP1.97□□□□□ -2.09
CD47-203ENST00000398258 PRKAR2BP31323 418 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 YWHABP31946 246 aaKnown RBP1.97□□□□□ -2.09
CD47-203ENST00000398258 UGT1A3P35503 534 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 GCKP35557 465 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 BTDP43251 543 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 CEBPDP49716 269 aaPredicted RBP1.97□□□□□ -2.09
CD47-203ENST00000398258 DAP3P51398 398 aaKnown RBP1.97□□□□□ -2.09
CD47-203ENST00000398258 DUSP3P51452 185 aaPredicted RBP1.97□□□□□ -2.09
CD47-203ENST00000398258 P2RY4P51582 365 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 PLK1P53350 603 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 HSPA2P54652 639 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 IGLV3-21P80748 117 aaPredicted RBP1.97□□□□□ -2.09
CD47-203ENST00000398258 CHRNB3Q05901 458 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 NCBP1Q09161 790 aaKnown RBP1.97□□□□□ -2.09
CD47-203ENST00000398258 ISXQ2M1V0 245 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 KLF17Q5JT82 389 aaPredicted RBP1.97□□□□□ -2.09
CD47-203ENST00000398258 C9orf129Q5T035 196 aaKnown RBP1.97□□□□□ -2.09
CD47-203ENST00000398258 ZNF658Q5TYW1 1059 aaPredicted RBP1.97□□□□□ -2.09
CD47-203ENST00000398258 OR4F3Q6IEY1 312 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 CCDC137Q6PK04 289 aaKnown RBP1.97□□□□□ -2.09
CD47-203ENST00000398258 FRA10AC1Q70Z53 315 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 CCDC80Q76M96 950 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 TRPM8Q7Z2W7 1104 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 C11orf53Q8IXP5 236 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 OR2L13Q8N349 312 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 OR5D13Q8NGL4 314 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 PAQR8Q8TEZ7 354 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 TCTEX1D2Q8WW35 142 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 SHC3Q92529 594 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 NT5C3BQ969T7 300 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 NOL4LQ96MY1 436 aaPredicted RBP1.97□□□□□ -2.09
CD47-203ENST00000398258 MTMR9Q96QG7 549 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 IL4I1Q96RQ9 567 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 NPY6RQ99463 290 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 ZBTB18Q99592 522 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 MAGT1Q9H0U3 335 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 SLITRK2Q9H156 845 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 NXF5Q9H1B4 397 aaKnown RBP1.97□□□□□ -2.09
CD47-203ENST00000398258 EHD1Q9H4M9 534 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 FN3KRPQ9HA64 309 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 PHF11Q9UIL8 331 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 PTBP2Q9UKA9 531 aaKnown RBP1.97□□□□□ -2.09
CD47-203ENST00000398258 PRPF19Q9UMS4 504 aaKnown RBP1.97□□□□□ -2.09
CD47-203ENST00000398258 MEMO1Q9Y316 297 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 TIMM10BQ9Y5J6 103 aa1.97□□□□□ -2.09
CD47-203ENST00000398258 CFAP65Q6ZU64 1925 aaKnown RBP1.97□□□□□ -2.09
CD47-203ENST00000398258 COL4A4P53420 1690 aaPredicted RBP1.96□□□□□ -2.1
CD47-203ENST00000398258 SMIM28A0A1B0GU29 152 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 FAM240BA0A1B0GVZ2 78 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 A0A1W2PPE3 182 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 FCN1O00602 326 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 OR10H3O60404 316 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 N4BP1O75113 896 aaKnown RBP1.96□□□□□ -2.1
CD47-203ENST00000398258 SLITRK3O94933 977 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 IL1BP01584 269 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 HSPB1P04792 205 aaKnown RBP1.96□□□□□ -2.1
CD47-203ENST00000398258 KRTAP1-4P0C5Y4 121 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 CALB2P22676 271 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 LEPP41159 167 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 AIF1P55008 147 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 RPL23AP62750 156 aaKnown RBP1.96□□□□□ -2.1
CD47-203ENST00000398258 TNFRSF17Q02223 184 aa1.96□□□□□ -2.1
CD47-203ENST00000398258 RNF212Q495C1 297 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms