RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 CCR8P51685 355 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 RPS27AP62979 156 aaKnown RBP5.08□□□□□ -1.6
PTPRD-205ENST00000397611 UBA52P62987 128 aaKnown RBP5.08□□□□□ -1.6
PTPRD-205ENST00000397611 HOXC5Q00444 222 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 CDNFQ49AH0 187 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 EIPR1Q53HC9 387 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 FCRLBQ6BAA4 426 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 TMEM220Q6QAJ8 160 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 OR10H5Q8NGA6 315 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 RLIMQ9NVW2 624 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 RNF186Q9NXI6 227 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 SLC23A1Q9UHI7 598 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 FBXL2Q9UKC9 423 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 DOCK6Q96HP0 2047 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 SDC3O75056 442 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 UBL3O95164 117 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 RCBTB2O95199 551 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 LALBAP00709 142 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 IFNA21P01568 189 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 LIPCP11150 499 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 NT5EP21589 574 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 RBMS1P29558 406 aaKnown RBP5.08□□□□□ -1.6
PTPRD-205ENST00000397611 SLC6A1P30531 599 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 CAMLGP49069 296 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 FNDC3BQ53EP0 1204 aaKnown RBP5.08□□□□□ -1.6
PTPRD-205ENST00000397611 ZNF385BQ569K4 471 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 PLBD1Q6P4A8 553 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 ANKK1Q8NFD2 765 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 PXT1Q8NFP0 134 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 DNTTIP1Q9H147 329 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 MVB12BQ9H7P6 319 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 MRPS30Q9NP92 439 aaKnown RBP5.08□□□□□ -1.6
PTPRD-205ENST00000397611 ACOXLQ9NUZ1 547 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 CASP8AP2Q9UKL3 1982 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 TBC1D3EA0A087X179 549 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 TO15178 435 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 AMY2AP04746 511 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 C8AP07357 584 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 TACSTD2P09758 323 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 RPS2P15880 293 aaKnown RBP5.08□□□□□ -1.6
PTPRD-205ENST00000397611 LSSP48449 732 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 PRKXP51817 358 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 TLE2Q04725 743 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 PON3Q15166 354 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 FAM180BQ6P0A1 224 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 HSD11B1LQ7Z5J1 315 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 CELF5Q8N6W0 485 aaKnown RBP5.08□□□□□ -1.6
PTPRD-205ENST00000397611 ZNF527Q8NB42 609 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 KREMEN2Q8NCW0 462 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 AUTS2Q8WXX7 1259 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 WBP2Q969T9 261 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 SCMH1Q96GD3 660 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 INSM2Q96T92 566 aaPredicted RBP5.08□□□□□ -1.6
PTPRD-205ENST00000397611 TMEM43Q9BTV4 400 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 ATG5Q9H1Y0 275 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 CYB5R1Q9UHQ9 305 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 SEC16AO15027 2179 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 ZNF749O43361 778 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 IGF2P01344 180 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 TCRBP04435 133 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 GCGRP47871 477 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 TNK1Q13470 666 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 CAMK2BQ13554 666 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 SF1Q15637 639 aaKnown RBP5.08□□□□□ -1.6
PTPRD-205ENST00000397611 BAK1Q16611 211 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 LEXMQ3ZCV2 418 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 Q6ZVU0 165 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 AMZ2Q86W34 360 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 OR2T33Q8NG76 320 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 OR5D16Q8NGK9 328 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 ZCCHC10Q8TBK6 192 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 SCARB1Q8WTV0 552 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 FAM46AQ96IP4 442 aaKnown RBP5.08□□□□□ -1.6
PTPRD-205ENST00000397611 MRGPRX3Q96LB0 322 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 HS6ST2Q96MM7 605 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 VN1R3Q9BXE9 311 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 HRH4Q9H3N8 390 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 MYO7AQ13402 2215 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 A0A0A6YYJ9 748 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 C1QTNF3-AMACRE9PGA6 284 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 SULT1B1O43704 296 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 FADS1O60427 444 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 UCHL1P09936 223 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 BMPR1AP36894 532 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 CBX5P45973 191 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 GATMP50440 423 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 AKR1C2P52895 323 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 ART1P52961 327 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 PER3P56645 1201 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 AKR1C1Q04828 323 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 HTR4Q13639 388 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 DECR1Q16698 335 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.08□□□□□ -1.6
PTPRD-205ENST00000397611 ERN2Q76MJ5 926 aaKnown RBP5.08□□□□□ -1.6
PTPRD-205ENST00000397611 VRK3Q8IV63 474 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 SPNS2Q8IVW8 549 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 CMIPQ8IY22 773 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 ARL14Q8N4G2 192 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 OR5T3Q8NGG3 340 aa5.08□□□□□ -1.6
PTPRD-205ENST00000397611 AHCYL2Q96HN2 611 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms