RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 C19orf57Q0VDD7 668 aa21.35■■□□□ 1.01
TSPAN4-203ENST00000397397 IQCCQ4KMZ1 466 aa21.35■■□□□ 1.01
TSPAN4-203ENST00000397397 ALG10BQ5I7T1 473 aa21.35■■□□□ 1.01
TSPAN4-203ENST00000397397 ULK3Q6PHR2 472 aa21.35■■□□□ 1.01
TSPAN4-203ENST00000397397 C10orf67Q8IYJ2 551 aa21.35■■□□□ 1.01
TSPAN4-203ENST00000397397 PAPD5Q8NDF8 572 aaKnown RBP21.35■■□□□ 1.01
TSPAN4-203ENST00000397397 FAR1Q8WVX9 515 aa21.35■■□□□ 1.01
TSPAN4-203ENST00000397397 DNAJA4Q8WW22 397 aaPredicted RBP21.35■■□□□ 1.01
TSPAN4-203ENST00000397397 NR4A3Q92570 626 aa21.35■■□□□ 1.01
TSPAN4-203ENST00000397397 DUS3LQ96G46 650 aaKnown RBP21.35■■□□□ 1.01
TSPAN4-203ENST00000397397 SLC41A3Q96GZ6 507 aa21.35■■□□□ 1.01
TSPAN4-203ENST00000397397 FNDC11Q9BVV2 318 aa21.35■■□□□ 1.01
TSPAN4-203ENST00000397397 RHCGQ9UBD6 479 aa21.35■■□□□ 1.01
TSPAN4-203ENST00000397397 RIMS3Q9UJD0 308 aa21.35■■□□□ 1.01
TSPAN4-203ENST00000397397 TLN1Q9Y490 2541 aaKnown RBP21.34■■□□□ 1.01
TSPAN4-203ENST00000397397 TRGV5A0A0B4J1U4 118 aa21.34■■□□□ 1.01
TSPAN4-203ENST00000397397 FFAR1O14842 300 aa21.34■■□□□ 1.01
TSPAN4-203ENST00000397397 ENTPD5O75356 428 aa21.34■■□□□ 1.01
TSPAN4-203ENST00000397397 WISP2O76076 250 aa21.34■■□□□ 1.01
TSPAN4-203ENST00000397397 GCKP35557 465 aa21.34■■□□□ 1.01
TSPAN4-203ENST00000397397 APOBEC1P41238 236 aaKnown RBP21.34■■□□□ 1.01
TSPAN4-203ENST00000397397 CDH12P55289 794 aa21.34■■□□□ 1.01
TSPAN4-203ENST00000397397 FOXD4Q12950 439 aaPredicted RBP21.34■■□□□ 1.01
TSPAN4-203ENST00000397397 ZNF324BQ6AW86 544 aaPredicted RBP21.34■■□□□ 1.01
TSPAN4-203ENST00000397397 TRILQ7L0X0 811 aa21.34■■□□□ 1.01
TSPAN4-203ENST00000397397 GDF7Q7Z4P5 450 aa21.34■■□□□ 1.01
TSPAN4-203ENST00000397397 ZNF347Q96SE7 839 aa21.34■■□□□ 1.01
TSPAN4-203ENST00000397397 PIP5K1AQ99755 562 aa21.34■■□□□ 1.01
TSPAN4-203ENST00000397397 YY1AP1Q9H869 796 aa21.34■■□□□ 1.01
TSPAN4-203ENST00000397397 OSGIN1Q9UJX0 560 aa21.34■■□□□ 1.01
TSPAN4-203ENST00000397397 SLC7A7Q9UM01 511 aa21.34■■□□□ 1.01
TSPAN4-203ENST00000397397 TMED7-TICAM2A0A0A6YYA0 188 aa21.33■■□□□ 1.01
TSPAN4-203ENST00000397397 HCN1O60741 890 aa21.33■■□□□ 1.01
TSPAN4-203ENST00000397397 IGHG3P01860 377 aa21.33■■□□□ 1.01
TSPAN4-203ENST00000397397 THY1P04216 161 aa21.33■■□□□ 1.01
TSPAN4-203ENST00000397397 CCNA2P20248 432 aa21.33■■□□□ 1.01
TSPAN4-203ENST00000397397 CXCR1P25024 350 aa21.33■■□□□ 1.01
TSPAN4-203ENST00000397397 ATG4DQ86TL0 474 aaPredicted RBP21.33■■□□□ 1.01
TSPAN4-203ENST00000397397 NEIL3Q8TAT5 605 aa21.33■■□□□ 1.01
TSPAN4-203ENST00000397397 PYDC1Q8WXC3 89 aa21.33■■□□□ 1.01
TSPAN4-203ENST00000397397 SERINC1Q9NRX5 453 aa21.33■■□□□ 1.01
TSPAN4-203ENST00000397397 AGPAT4Q9NRZ5 378 aa21.33■■□□□ 1.01
TSPAN4-203ENST00000397397 ASF1BQ9NVP2 202 aa21.33■■□□□ 1.01
TSPAN4-203ENST00000397397 ACAD8Q9UKU7 415 aa21.33■■□□□ 1.01
TSPAN4-203ENST00000397397 TMED7Q9Y3B3 224 aa21.33■■□□□ 1.01
TSPAN4-203ENST00000397397 ZNF337Q9Y3M9 751 aa21.33■■□□□ 1.01
TSPAN4-203ENST00000397397 AP4S1Q9Y587 144 aa21.33■■□□□ 1.01
TSPAN4-203ENST00000397397 ELOA3DA6NLF2 546 aaPredicted RBP21.32■■□□□ 1
TSPAN4-203ENST00000397397 CHP2O43745 196 aa21.32■■□□□ 1
TSPAN4-203ENST00000397397 IL11P20809 199 aa21.32■■□□□ 1
TSPAN4-203ENST00000397397 CHMP24386 653 aa21.32■■□□□ 1
TSPAN4-203ENST00000397397 GFRA1P56159 465 aa21.32■■□□□ 1
TSPAN4-203ENST00000397397 ST3GAL3Q11203 375 aa21.32■■□□□ 1
TSPAN4-203ENST00000397397 ELOA3BQ3SY89 546 aa21.32■■□□□ 1
TSPAN4-203ENST00000397397 SWT1Q5T5J6 900 aaKnown RBP21.32■■□□□ 1
TSPAN4-203ENST00000397397 AAGABQ6PD74 315 aa21.32■■□□□ 1
TSPAN4-203ENST00000397397 ADGRG3Q86Y34 549 aa21.32■■□□□ 1
TSPAN4-203ENST00000397397 OFCC1Q8IZS5 231 aa21.32■■□□□ 1
TSPAN4-203ENST00000397397 ATP6V1C2Q8NEY4 427 aa21.32■■□□□ 1
TSPAN4-203ENST00000397397 ELOA3Q8NG57 546 aa21.32■■□□□ 1
TSPAN4-203ENST00000397397 GPR137Q96N19 417 aa21.32■■□□□ 1
TSPAN4-203ENST00000397397 C12orf10Q9HB07 376 aa21.32■■□□□ 1
TSPAN4-203ENST00000397397 TESMINQ9Y4I5 508 aa21.32■■□□□ 1
TSPAN4-203ENST00000397397 KALRNO60229 2985 aa21.32■■□□□ 1
TSPAN4-203ENST00000397397 H3BML4 177 aa21.31■■□□□ 1
TSPAN4-203ENST00000397397 EFNA2O43921 213 aa21.31■■□□□ 1
TSPAN4-203ENST00000397397 SUSD5O60279 629 aa21.31■■□□□ 1
TSPAN4-203ENST00000397397 TIPRLO75663 272 aa21.31■■□□□ 1
TSPAN4-203ENST00000397397 PRSS23O95084 383 aa21.31■■□□□ 1
TSPAN4-203ENST00000397397 LYPD3O95274 346 aa21.31■■□□□ 1
TSPAN4-203ENST00000397397 THRBP10828 461 aa21.31■■□□□ 1
TSPAN4-203ENST00000397397 PNMTP11086 282 aa21.31■■□□□ 1
TSPAN4-203ENST00000397397 ELK4P28324 431 aa21.31■■□□□ 1
TSPAN4-203ENST00000397397 SPIBQ01892 262 aa21.31■■□□□ 1
TSPAN4-203ENST00000397397 ZNF800Q2TB10 664 aaPredicted RBP eCLIP21.31■■□□□ 1
TSPAN4-203ENST00000397397 LSRQ86X29 649 aaPredicted RBP21.31■■□□□ 1
TSPAN4-203ENST00000397397 PIK3C3Q8NEB9 887 aa21.31■■□□□ 1
TSPAN4-203ENST00000397397 SLC38A4Q969I6 547 aa21.31■■□□□ 1
TSPAN4-203ENST00000397397 ARMC1Q9NVT9 282 aa21.31■■□□□ 1
TSPAN4-203ENST00000397397 TMEM72A0PK05 275 aa21.3■■□□□ 1
TSPAN4-203ENST00000397397 LINC01387J3KSC0 135 aa21.3■■□□□ 1
TSPAN4-203ENST00000397397 H1F0P07305 194 aaKnown RBP21.3■■□□□ 1
TSPAN4-203ENST00000397397 PEPDP12955 493 aa21.3■■□□□ 1
TSPAN4-203ENST00000397397 BMP7P18075 431 aa21.3■■□□□ 1
TSPAN4-203ENST00000397397 MLLT10P55197 1068 aa21.3■■□□□ 1
TSPAN4-203ENST00000397397 SELENBP1Q13228 472 aa21.3■■□□□ 1
TSPAN4-203ENST00000397397 TRAM2Q15035 370 aa21.3■■□□□ 1
TSPAN4-203ENST00000397397 KRTCAP3Q53RY4 240 aa21.3■■□□□ 1
TSPAN4-203ENST00000397397 ZFP1Q6P2D0 407 aa21.3■■□□□ 1
TSPAN4-203ENST00000397397 ZNF605Q86T29 641 aa21.3■■□□□ 1
TSPAN4-203ENST00000397397 SMPDL3BQ92485 455 aa21.3■■□□□ 1
TSPAN4-203ENST00000397397 STMN2Q93045 179 aa21.3■■□□□ 1
TSPAN4-203ENST00000397397 ABTB1Q969K4 478 aaPredicted RBP21.3■■□□□ 1
TSPAN4-203ENST00000397397 TMEM185BQ9H7F4 350 aa21.3■■□□□ 1
TSPAN4-203ENST00000397397 NMNAT1Q9HAN9 279 aaPredicted RBP21.3■■□□□ 1
TSPAN4-203ENST00000397397 PLSCR2Q9NRY7 297 aa21.3■■□□□ 1
TSPAN4-203ENST00000397397 SPRR3Q9UBC9 169 aa21.3■■□□□ 1
TSPAN4-203ENST00000397397 CHRNA9Q9UGM1 479 aa21.3■■□□□ 1
TSPAN4-203ENST00000397397 SPIN1Q9Y657 262 aaPredicted RBP21.3■■□□□ 1
TSPAN4-203ENST00000397397 BOD1L1Q8NFC6 3051 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms