RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 EFNB1P98172 346 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 OCLNQ16625 522 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 DECR1Q16698 335 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 FCRLBQ6BAA4 426 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 H3F3CQ6NXT2 135 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 FIGNL1Q6PIW4 674 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 C16orf47Q6ZP98 133 aaPredicted RBP13.65□□□□□ -0.22
CAPN3-207ENST00000397200 LINC00299Q6ZSB3 139 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 RPS19BP1Q86WX3 136 aaKnown RBP13.65□□□□□ -0.22
CAPN3-207ENST00000397200 SLC34A3Q8N130 599 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 SIRT6Q8N6T7 355 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 BCORP1Q8N888 145 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 OR8J1Q8NGP2 316 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 SLC22A8Q8TCC7 542 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 GNPDA2Q8TDQ7 276 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 ACOT11Q8WXI4 607 aaPredicted RBP13.65□□□□□ -0.22
CAPN3-207ENST00000397200 DTNBP1Q96EV8 351 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 Q96MT0 163 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 POLDIP3Q9BY77 421 aaKnown RBP13.65□□□□□ -0.22
CAPN3-207ENST00000397200 CDCP1Q9H5V8 836 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 EVA1AQ9H8M9 152 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 SELENONQ9NZV5 590 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 ZNF232Q9UNY5 417 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 FRYQ5TBA9 3013 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 MED13Q9UHV7 2174 aa13.65□□□□□ -0.22
CAPN3-207ENST00000397200 CENPVL1A0A0U1RR11 272 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 AP3D1O14617 1153 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 FRS3O43559 492 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 OR2J2O76002 312 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 THY1P04216 161 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 STSP08842 583 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 ADORA3P0DMS8 318 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 NID1P14543 1247 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 POU1F1P28069 291 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 IFNA8P32881 189 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 OMPP47874 163 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 PSMD4P55036 377 aaKnown RBP13.64□□□□□ -0.23
CAPN3-207ENST00000397200 TMPRSS3P57727 454 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 MLF1P58340 268 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 LSM11P83369 360 aaKnown RBP eCLIP13.64□□□□□ -0.23
CAPN3-207ENST00000397200 PLCXD2Q0VAA5 305 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 TSPAN31Q12999 210 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 MAPK14Q16539 360 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 CCNJQ5T5M9 372 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 MEDAGQ5VYS4 303 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 RNLSQ5VYX0 342 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 KIF18BQ86Y91 864 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 PRR22Q8IZ63 422 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 SLC15A4Q8N697 577 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 CRELD1Q96HD1 420 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 LMF1Q96S06 567 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 MCHR1Q99705 422 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 G6PC3Q9BUM1 346 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 CACYBPQ9HB71 228 aaKnown RBP13.64□□□□□ -0.23
CAPN3-207ENST00000397200 TEKT2Q9UIF3 430 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 YARS2Q9Y2Z4 477 aaKnown RBP13.64□□□□□ -0.23
CAPN3-207ENST00000397200 CPSF4LA6NMK7 179 aaKnown RBP13.64□□□□□ -0.23
CAPN3-207ENST00000397200 H3BN98 237 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 FMO6PO60774 539 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 ENTPD6O75354 484 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 ITGA10O75578 1167 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 REM1O75628 298 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 NADKO95544 446 aaPredicted RBP13.64□□□□□ -0.23
CAPN3-207ENST00000397200 FPR3P25089 353 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 ITPKBP27987 946 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 ABCD3P28288 659 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 IL12BP29460 328 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 SOX8P57073 446 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 ST3GAL4Q11206 333 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 CASP12Q6UXS9 341 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 RASSF6Q6ZTQ3 369 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 PLEKHM3Q6ZWE6 761 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 ZNF367Q7RTV3 350 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 GDF7Q7Z4P5 450 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 ARMC10Q8N2F6 343 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 STX19Q8N4C7 294 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 FAM26EQ8N5C1 309 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 POGLUT1Q8NBL1 392 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 PSMF1Q92530 271 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 OMA1Q96E52 524 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 RASL10BQ96S79 203 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 PRR14Q9BWN1 585 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 CPNE5Q9HCH3 593 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 AMBNQ9NP70 447 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 CTPS2Q9NRF8 586 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 KCNE5Q9UJ90 142 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 NPFFR2Q9Y5X5 522 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 CELSR3Q9NYQ7 3312 aa13.64□□□□□ -0.23
CAPN3-207ENST00000397200 CDHR4A6H8M9 788 aa13.63□□□□□ -0.23
CAPN3-207ENST00000397200 A6NL46 340 aa13.63□□□□□ -0.23
CAPN3-207ENST00000397200 K7ENP7 123 aa13.63□□□□□ -0.23
CAPN3-207ENST00000397200 TAF4O00268 1085 aa13.63□□□□□ -0.23
CAPN3-207ENST00000397200 CLPXO76031 633 aa13.63□□□□□ -0.23
CAPN3-207ENST00000397200 IL33O95760 270 aa13.63□□□□□ -0.23
CAPN3-207ENST00000397200 IGKV1D-16P01601 117 aa13.63□□□□□ -0.23
CAPN3-207ENST00000397200 ADRA2AP08913 450 aa13.63□□□□□ -0.23
CAPN3-207ENST00000397200 LIPAP38571 399 aa13.63□□□□□ -0.23
CAPN3-207ENST00000397200 PCYT1AP49585 367 aa13.63□□□□□ -0.23
CAPN3-207ENST00000397200 TMED10P49755 219 aaKnown RBP13.63□□□□□ -0.23
CAPN3-207ENST00000397200 SSR4P51571 173 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms