RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 SEC22BO75396 215 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 VENTXO95231 258 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 SNRPAP09012 282 aaKnown RBP13.07□□□□□ -0.32
SEC13-206ENST00000397102 TACSTD2P09758 323 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 UBL4AP11441 157 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 PRPH2P23942 346 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 NTF4P34130 210 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 COMPP49747 757 aaPredicted RBP13.07□□□□□ -0.32
SEC13-206ENST00000397102 CCR4P51679 360 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 CHN2P52757 468 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 SLC25A3Q00325 362 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 PDE7AQ13946 482 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 ZSWIM7Q19AV6 140 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 SYT14P1Q58G82 188 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 DCST2Q5T1A1 773 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 SLC46A3Q7Z3Q1 461 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 LCA5Q86VQ0 697 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 ZNF614Q8N883 585 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 LINC01356Q8N9X3 169 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 SEMA6DQ8NFY4 1073 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 PIGXQ8TBF5 258 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 SLC25A43Q8WUT9 341 aaPredicted RBP13.07□□□□□ -0.32
SEC13-206ENST00000397102 ST8SIA1Q92185 356 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 HPS1Q92902 700 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 ZHX1-C8orf76Q96EF9 292 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 CCT7Q99832 543 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 CDC42EP4Q9H3Q1 356 aaKnown RBP13.07□□□□□ -0.32
SEC13-206ENST00000397102 SIRT3Q9NTG7 399 aaPredicted RBP13.07□□□□□ -0.32
SEC13-206ENST00000397102 ZCCHC3Q9NUD5 404 aaKnown RBP13.07□□□□□ -0.32
SEC13-206ENST00000397102 METRNQ9UJH8 293 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 DCTN4Q9UJW0 460 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 MOKQ9UQ07 419 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 CCL27Q9Y4X3 112 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 TENM1Q9UKZ4 2725 aa13.07□□□□□ -0.32
SEC13-206ENST00000397102 MEGF8Q7Z7M0 2845 aa13.06□□□□□ -0.32
SEC13-206ENST00000397102 AKAP10O43572 662 aa13.06□□□□□ -0.32
SEC13-206ENST00000397102 DNAJA2O60884 412 aa13.06□□□□□ -0.32
SEC13-206ENST00000397102 STAMBPO95630 424 aa13.06□□□□□ -0.32
SEC13-206ENST00000397102 GIFP27352 417 aa13.06□□□□□ -0.32
SEC13-206ENST00000397102 SLC16A1P53985 500 aa13.06□□□□□ -0.32
SEC13-206ENST00000397102 DEF8Q6ZN54 512 aa13.06□□□□□ -0.32
SEC13-206ENST00000397102 C3orf56Q8N813 242 aa13.06□□□□□ -0.32
SEC13-206ENST00000397102 OR52E4Q8NGH9 312 aa13.06□□□□□ -0.32
SEC13-206ENST00000397102 OCEL1Q9H607 264 aa13.06□□□□□ -0.32
SEC13-206ENST00000397102 B9A039 149 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 DNPH1O43598 174 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 LILRA1O75019 489 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 CRCPO75575 148 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 PDE5AO76074 875 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 PMS2P2O95744 297 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 WNT11O96014 354 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 SDC1P18827 310 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 PCMT1P22061 227 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 APEX1P27695 318 aaKnown RBP13.05□□□□□ -0.32
SEC13-206ENST00000397102 IL2RGP31785 369 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 SERPINF1P36955 418 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 SESN3P58005 492 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 PRPS1P60891 318 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 ACTG1P63261 375 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 TGFBR3Q03167 851 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 MERTKQ12866 999 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 C9orf135Q5VTT2 229 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 UGT2A3Q6UWM9 527 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 TIFABQ6ZNK6 161 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 CCNYL1Q8N7R7 359 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 ADAMTS15Q8TE58 950 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 TMEM234Q8WY98 164 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 FCRL1Q96LA6 429 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 TSSK3Q96PN8 268 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 THUMPD3Q9BV44 507 aaKnown RBP13.05□□□□□ -0.32
SEC13-206ENST00000397102 ACTRT3Q9BYD9 372 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 LAT2Q9GZY6 243 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 C1orf109Q9NX04 203 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 UPB1Q9UBR1 384 aa13.05□□□□□ -0.32
SEC13-206ENST00000397102 MGAM2Q2M2H8 2515 aa13.04□□□□□ -0.32
SEC13-206ENST00000397102 SNUPNO95149 360 aaKnown RBP13.04□□□□□ -0.32
SEC13-206ENST00000397102 KRT16P08779 473 aa13.04□□□□□ -0.32
SEC13-206ENST00000397102 EFNA1P20827 205 aaPredicted RBP13.04□□□□□ -0.32
SEC13-206ENST00000397102 PPOXP50336 477 aa13.04□□□□□ -0.32
SEC13-206ENST00000397102 DVL1P1P54792 670 aaPredicted RBP13.04□□□□□ -0.32
SEC13-206ENST00000397102 CDH15P55291 814 aa13.04□□□□□ -0.32
SEC13-206ENST00000397102 NAA20P61599 178 aa13.04□□□□□ -0.32
SEC13-206ENST00000397102 SLC7A5Q01650 507 aa13.04□□□□□ -0.32
SEC13-206ENST00000397102 SKP2Q13309 424 aa13.04□□□□□ -0.32
SEC13-206ENST00000397102 EFNB3Q15768 340 aa13.04□□□□□ -0.32
SEC13-206ENST00000397102 KLHL24Q6TFL4 600 aa13.04□□□□□ -0.32
SEC13-206ENST00000397102 CASP12Q6UXS9 341 aa13.04□□□□□ -0.32
SEC13-206ENST00000397102 RINLQ6ZS11 566 aa13.04□□□□□ -0.32
SEC13-206ENST00000397102 MTERF3Q96E29 417 aa13.04□□□□□ -0.32
SEC13-206ENST00000397102 RAB1BQ9H0U4 201 aa13.04□□□□□ -0.32
SEC13-206ENST00000397102 PLK3Q9H4B4 646 aa13.04□□□□□ -0.32
SEC13-206ENST00000397102 SLC7A10Q9NS82 523 aa13.04□□□□□ -0.32
SEC13-206ENST00000397102 CA10Q9NS85 328 aa13.04□□□□□ -0.32
SEC13-206ENST00000397102 ACER3Q9NUN7 267 aa13.04□□□□□ -0.32
SEC13-206ENST00000397102 FBXO9Q9UK97 447 aaPredicted RBP13.04□□□□□ -0.32
SEC13-206ENST00000397102 FAF1Q9UNN5 650 aaPredicted RBP13.04□□□□□ -0.32
SEC13-206ENST00000397102 SPIN1Q9Y657 262 aaPredicted RBP13.04□□□□□ -0.32
SEC13-206ENST00000397102 KCNE3Q9Y6H6 103 aa13.04□□□□□ -0.32
SEC13-206ENST00000397102 TMEM89A2RUT3 159 aa13.03□□□□□ -0.32
SEC13-206ENST00000397102 SERINC4A6NH21 518 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms