RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 CLLU1OSQ5K130 101 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 KCTD20Q7Z5Y7 419 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 MFSD6LQ8IWD5 586 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 DCUN1D4Q92564 292 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 BPIFA2Q96DR5 249 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 ALG8Q9BVK2 526 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 XYLT2Q9H1B5 865 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 ACKR4Q9NPB9 350 aa6.74□□□□□ -1.33
UPF2-203ENST00000397053 DHCR7Q9UBM7 475 aaKnown RBP6.74□□□□□ -1.33
UPF2-203ENST00000397053 H0YGG7 62 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 EFSO43281 561 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 RETP07949 1114 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 OSMP13725 252 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 PRKACBP22694 351 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 SLC35A1P78382 337 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 EDDM3AQ14507 147 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 LTB4RQ15722 352 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 SFT2D3Q587I9 215 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 ZMAT1Q5H9K5 638 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 ZNF468Q5VIY5 522 aaPredicted RBP6.73□□□□□ -1.33
UPF2-203ENST00000397053 CST9LP1Q5W188 147 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 VASNQ6EMK4 673 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 DPY19L2P1Q6NXN4 242 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 HSD11B1LQ7Z5J1 315 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 RPS19BP1Q86WX3 136 aaKnown RBP6.73□□□□□ -1.33
UPF2-203ENST00000397053 PDZD9Q8IXQ8 264 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 ZNF595Q8IYB9 648 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 APIPQ96GX9 242 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 TPPP3Q9BW30 176 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 C14orf119Q9NWQ9 140 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 STUB1Q9UNE7 303 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 AK6Q9Y3D8 172 aaKnown RBP6.73□□□□□ -1.33
UPF2-203ENST00000397053 CEP152O94986 1710 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 DIP2CQ9Y2E4 1556 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 FIGNL2A6NMB9 653 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 H3BNC9 293 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 LCMT2O60294 686 aaKnown RBP6.73□□□□□ -1.33
UPF2-203ENST00000397053 ENPP1P22413 925 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 HIST1H1TP22492 207 aaPredicted RBP6.73□□□□□ -1.33
UPF2-203ENST00000397053 FDXRP22570 491 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 ETV4P43268 484 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 MAP2K4P45985 399 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 HOXA1P49639 335 aaPredicted RBP6.73□□□□□ -1.33
UPF2-203ENST00000397053 CDKN2DP55273 166 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 UBE2G2P60604 165 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 RACK1P63244 317 aaKnown RBP6.73□□□□□ -1.33
UPF2-203ENST00000397053 FAM78AQ5JUQ0 283 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 CLVS2Q5SYC1 327 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 ZNF322Q6U7Q0 402 aaPredicted RBP6.73□□□□□ -1.33
UPF2-203ENST00000397053 HPSE2Q8WWQ2 592 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 FOXN4Q96NZ1 517 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 PIGQQ9BRB3 760 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 SAMD10Q9BYL1 202 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 FOXQ1Q9C009 403 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 ANKRD10Q9NXR5 420 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 B3GAT1Q9P2W7 334 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 BTNL2Q9UIR0 455 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 SERTM1A2A2V5 107 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 H0YAE9 185 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 FANCGO15287 622 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 ZNF264O43296 627 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 PRAMEF4O60810 478 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 BIDP55957 195 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 KCNJ10P78508 379 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 MAP4K2Q12851 820 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 RPS26P11Q5JNZ5 115 aaPredicted RBP6.73□□□□□ -1.33
UPF2-203ENST00000397053 ELP2Q6IA86 826 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 NAGSQ8N159 534 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 OR4A16Q8NH70 328 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 FNDC8Q8TC99 324 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 ZFAND1Q8TCF1 268 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 TMEM40Q8WWA1 233 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 CORO2AQ92828 525 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 CDS1Q92903 461 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 NEIL2Q969S2 332 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 FOXRED1Q96CU9 486 aaPredicted RBP6.73□□□□□ -1.33
UPF2-203ENST00000397053 MBOAT4Q96T53 435 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 OCSTAMPQ9BR26 566 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 SLC25A31Q9H0C2 315 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 C12orf49Q9H741 205 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 ZDHHC18Q9NUE0 388 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 TEX10Q9NXF1 929 aaPredicted RBP6.73□□□□□ -1.33
UPF2-203ENST00000397053 QPCTLQ9NXS2 382 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 INTS6Q9UL03 887 aaKnown RBP6.73□□□□□ -1.33
UPF2-203ENST00000397053 ATG4BQ9Y4P1 393 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 PTGDR2Q9Y5Y4 395 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 ATP23Q9Y6H3 246 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 CEP250Q9BV73 2442 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 A0A1W2PS29 197 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 FAM166BA8MTA8 275 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 UGDHO60701 494 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 EIF1BO60739 113 aaKnown RBP6.73□□□□□ -1.33
UPF2-203ENST00000397053 DPM1O60762 260 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 ADH4P08319 380 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 ELK4P28324 431 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 HTR6P50406 440 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 SPOCK1Q08629 439 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 MGAT3Q09327 533 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 PODNL1Q6PEZ8 512 aa6.73□□□□□ -1.33
UPF2-203ENST00000397053 COX15Q7KZN9 410 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms