RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 CD96P40200 585 aa18.57■□□□□ 0.56
VCPKMT-202ENST00000395860 GSSP48637 474 aa18.57■□□□□ 0.56
VCPKMT-202ENST00000395860 MASP1P48740 699 aa18.57■□□□□ 0.56
VCPKMT-202ENST00000395860 TSPAN31Q12999 210 aa18.57■□□□□ 0.56
VCPKMT-202ENST00000395860 CD300LDQ6UXZ3 194 aa18.57■□□□□ 0.56
VCPKMT-202ENST00000395860 MARVELD2Q8N4S9 558 aa18.57■□□□□ 0.56
VCPKMT-202ENST00000395860 WDSUB1Q8N9V3 476 aa18.57■□□□□ 0.56
VCPKMT-202ENST00000395860 PSD4Q8NDX1 1056 aa18.57■□□□□ 0.56
VCPKMT-202ENST00000395860 OR2M3Q8NG83 312 aa18.57■□□□□ 0.56
VCPKMT-202ENST00000395860 OR4K17Q8NGC6 315 aa18.57■□□□□ 0.56
VCPKMT-202ENST00000395860 PROK2Q9HC23 129 aa18.57■□□□□ 0.56
VCPKMT-202ENST00000395860 C20orf141Q9NUB4 165 aa18.57■□□□□ 0.56
VCPKMT-202ENST00000395860 REV1Q9UBZ9 1251 aa18.57■□□□□ 0.56
VCPKMT-202ENST00000395860 TMEM5Q9Y2B1 443 aa18.57■□□□□ 0.56
VCPKMT-202ENST00000395860 HRH3Q9Y5N1 445 aa18.57■□□□□ 0.56
VCPKMT-202ENST00000395860 G3V3Y1 287 aa18.56■□□□□ 0.56
VCPKMT-202ENST00000395860 BCKDKO14874 412 aa18.56■□□□□ 0.56
VCPKMT-202ENST00000395860 CXCR1P25024 350 aa18.56■□□□□ 0.56
VCPKMT-202ENST00000395860 FPR3P25089 353 aa18.56■□□□□ 0.56
VCPKMT-202ENST00000395860 EPHA2P29317 976 aa18.56■□□□□ 0.56
VCPKMT-202ENST00000395860 ZNF41P51814 821 aaPredicted RBP18.56■□□□□ 0.56
VCPKMT-202ENST00000395860 TPD52P55327 224 aaPredicted RBP18.56■□□□□ 0.56
VCPKMT-202ENST00000395860 ESRRGP62508 458 aa18.56■□□□□ 0.56
VCPKMT-202ENST00000395860 TUBA3CQ13748 450 aa18.56■□□□□ 0.56
VCPKMT-202ENST00000395860 PDK3Q15120 406 aa18.56■□□□□ 0.56
VCPKMT-202ENST00000395860 TUBA3EQ6PEY2 450 aa18.56■□□□□ 0.56
VCPKMT-202ENST00000395860 POMZP3Q6PJE2 187 aa18.56■□□□□ 0.56
VCPKMT-202ENST00000395860 ISLR2Q6UXK2 745 aa18.56■□□□□ 0.56
VCPKMT-202ENST00000395860 GRINAQ7Z429 371 aa18.56■□□□□ 0.56
VCPKMT-202ENST00000395860 ZNF227Q86WZ6 799 aa18.56■□□□□ 0.56
VCPKMT-202ENST00000395860 P3H2Q8IVL5 708 aa18.56■□□□□ 0.56
VCPKMT-202ENST00000395860 SNIP1Q8TAD8 396 aaKnown RBP18.56■□□□□ 0.56
VCPKMT-202ENST00000395860 ST8SIA1Q92185 356 aa18.56■□□□□ 0.56
VCPKMT-202ENST00000395860 BPIFA2Q96DR5 249 aa18.56■□□□□ 0.56
VCPKMT-202ENST00000395860 PTGES2Q9H7Z7 377 aa18.56■□□□□ 0.56
VCPKMT-202ENST00000395860 TIMMDC1Q9NPL8 285 aa18.56■□□□□ 0.56
VCPKMT-202ENST00000395860 MEPEQ9NQ76 525 aaPredicted RBP18.56■□□□□ 0.56
VCPKMT-202ENST00000395860 OSGIN1Q9UJX0 560 aa18.56■□□□□ 0.56
VCPKMT-202ENST00000395860 VDAC3Q9Y277 283 aa18.56■□□□□ 0.56
VCPKMT-202ENST00000395860 H3BN98 237 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 SNX4O95219 450 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 SOX14O95416 240 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 WDPCPO95876 746 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 MYF6P23409 242 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 POLR2HP52434 150 aaKnown RBP18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 CRISP1P54107 249 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 CTBP2P56545 445 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 CRYZQ08257 329 aaKnown RBP18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 DEFB109BQ30KR1 87 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 KRT80Q6KB66 452 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 ARSKQ6UWY0 536 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 USP51Q70EK9 711 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 PLCZ1Q86YW0 608 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 FADS6Q8N9I5 356 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 JSRP1Q96MG2 331 aaPredicted RBP18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 MUS81Q96NY9 551 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 FBXL2Q9UKC9 423 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 GMPPBQ9Y5P6 360 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 FAM47E-STBD1D6RA91 191 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 EFSO43281 561 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 PRKCAP17252 672 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 POU1F1P28069 291 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 HTR3AP46098 478 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 CCL11P51671 97 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 KEAP1Q14145 624 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 SPINK14Q6IE38 97 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 OR1J4Q8NGS1 313 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 NTNG2Q96CW9 530 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 TMEM41AQ96HV5 264 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 TMEM43Q9BTV4 400 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 SLC19A3Q9BZV2 496 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 MED17Q9NVC6 651 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 UBAP1Q9NZ09 502 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 PLA2G3Q9NZ20 509 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 MPDZO75970 2070 aa18.55■□□□□ 0.56
VCPKMT-202ENST00000395860 DCHS1Q96JQ0 3298 aa18.54■□□□□ 0.56
VCPKMT-202ENST00000395860 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.54■□□□□ 0.56
VCPKMT-202ENST00000395860 TMED7-TICAM2A0A0A6YYA0 188 aa18.54■□□□□ 0.56
VCPKMT-202ENST00000395860 SNPHO15079 494 aa18.54■□□□□ 0.56
VCPKMT-202ENST00000395860 KLF4O43474 513 aa18.54■□□□□ 0.56
VCPKMT-202ENST00000395860 RPSAP08865 295 aaKnown RBP18.54■□□□□ 0.56
VCPKMT-202ENST00000395860 CCNA2P20248 432 aa18.54■□□□□ 0.56
VCPKMT-202ENST00000395860 MAKP20794 623 aa18.54■□□□□ 0.56
VCPKMT-202ENST00000395860 CHMP24386 653 aa18.54■□□□□ 0.56
VCPKMT-202ENST00000395860 IL18R1Q13478 541 aa18.54■□□□□ 0.56
VCPKMT-202ENST00000395860 OR1C1Q15619 314 aa18.54■□□□□ 0.56
VCPKMT-202ENST00000395860 Q6ZPB1 254 aaPredicted RBP18.54■□□□□ 0.56
VCPKMT-202ENST00000395860 TMPRSS11FQ6ZWK6 438 aa18.54■□□□□ 0.56
VCPKMT-202ENST00000395860 C8orf59Q8N0T1 100 aaPredicted RBP18.54■□□□□ 0.56
VCPKMT-202ENST00000395860 HRASLS5Q96KN8 279 aa18.54■□□□□ 0.56
VCPKMT-202ENST00000395860 SIGLEC12Q96PQ1 595 aa18.54■□□□□ 0.56
VCPKMT-202ENST00000395860 TMED7Q9Y3B3 224 aa18.54■□□□□ 0.56
VCPKMT-202ENST00000395860 ENO4A6NNW6 628 aa18.53■□□□□ 0.56
VCPKMT-202ENST00000395860 CDK2AP1O14519 115 aa18.53■□□□□ 0.56
VCPKMT-202ENST00000395860 CDC42EP2O14613 210 aa18.53■□□□□ 0.56
VCPKMT-202ENST00000395860 NEURL1O76050 574 aa18.53■□□□□ 0.56
VCPKMT-202ENST00000395860 SAGP10523 405 aaPredicted RBP18.53■□□□□ 0.56
VCPKMT-202ENST00000395860 DNASE1L1P49184 302 aa18.53■□□□□ 0.56
VCPKMT-202ENST00000395860 PTGES3Q15185 160 aaKnown RBP18.53■□□□□ 0.56
VCPKMT-202ENST00000395860 RASSF6Q6ZTQ3 369 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms