RNA–Protein interactions for RNA: ENST00000394892.2

ATG4A-205, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-205ENST00000394892 WDR45Q9Y484 360 aa7.86□□□□□ -1.15
ATG4A-205ENST00000394892 FLNAP21333 2647 aaKnown RBP7.86□□□□□ -1.15
ATG4A-205ENST00000394892 ROS1P08922 2347 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 AGAP5A6NIR3 686 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 ZNF716A6NP11 495 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 H3BNH8 94 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 CYTIPO60759 359 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 PRKD3O94806 890 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 LY6G6DO95868 133 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 PLGP00747 810 aaPredicted RBP7.85□□□□□ -1.15
ATG4A-205ENST00000394892 YES1P07947 543 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 IMPDH2P12268 514 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 PCSK6P29122 969 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 RYKP34925 604 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 FOXG1P55316 489 aaPredicted RBP7.85□□□□□ -1.15
ATG4A-205ENST00000394892 CTBP2P56545 445 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 KCNJ10P78508 379 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 MERTKQ12866 999 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 CBFBQ13951 182 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 ACKR1Q16570 336 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 DPY19L1Q2PZI1 675 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 PDCD4Q53EL6 469 aaKnown RBP7.85□□□□□ -1.15
ATG4A-205ENST00000394892 TTMPQ5BVD1 217 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 Q5PR19 223 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 ZNF621Q6ZSS3 439 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 TMPPEQ6ZT21 453 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 EIF3MQ7L2H7 374 aaKnown RBP7.85□□□□□ -1.15
ATG4A-205ENST00000394892 C16orf62Q7Z3J2 963 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 FUNDC1Q8IVP5 155 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 MSRB3Q8IXL7 192 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 SPATA3Q8NHX4 192 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 ST8SIA1Q92185 356 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 NEUROG1Q92886 237 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 CPNE4Q96A23 557 aaPredicted RBP7.85□□□□□ -1.15
ATG4A-205ENST00000394892 S100PBPQ96BU1 408 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 TRNT1Q96Q11 434 aaKnown RBP7.85□□□□□ -1.15
ATG4A-205ENST00000394892 OR5B2Q96R09 309 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 OR52E6Q96RD3 313 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 SLCO1B3Q9NPD5 702 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 POLE3Q9NRF9 147 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 SDR39U1Q9NRG7 319 aaPredicted RBP7.85□□□□□ -1.15
ATG4A-205ENST00000394892 GLRX2Q9NS18 164 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 EXD2Q9NVH0 621 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 RLIMQ9NVW2 624 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 PCDHGB4Q9UN71 923 aa7.85□□□□□ -1.15
ATG4A-205ENST00000394892 ANK3Q12955 4377 aaKnown RBP7.85□□□□□ -1.15
ATG4A-205ENST00000394892 NUP214P35658 2090 aaPredicted RBP7.85□□□□□ -1.15
ATG4A-205ENST00000394892 DSPPQ9NZW4 1301 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 TMEM72A0PK05 275 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 ZC3H12DA2A288 527 aaKnown RBP7.84□□□□□ -1.15
ATG4A-205ENST00000394892 KLF11O14901 512 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 ADAP00813 363 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 FESP07332 822 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 NUDT7P0C024 238 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 TFPTP0C1Z6 253 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 PRG2P13727 222 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 ETFAP13804 333 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 FPR1P21462 350 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 CHI3L1P36222 383 aaPredicted RBP7.84□□□□□ -1.15
ATG4A-205ENST00000394892 ACAA2P42765 397 aaKnown RBP7.84□□□□□ -1.15
ATG4A-205ENST00000394892 OR3A2P47893 321 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 DIO1P49895 249 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 KHKP50053 298 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 CAPRIN1Q14444 709 aaKnown RBP7.84□□□□□ -1.15
ATG4A-205ENST00000394892 TAB1Q15750 504 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 SYT14P1Q58G82 188 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 RPS26P11Q5JNZ5 115 aaPredicted RBP7.84□□□□□ -1.15
ATG4A-205ENST00000394892 PDSS1Q5T2R2 415 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 SFRP5Q5T4F7 317 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 ABLIM2Q6H8Q1 611 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 EPGNQ6UW88 154 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 DNAJC14Q6Y2X3 702 aaPredicted RBP7.84□□□□□ -1.15
ATG4A-205ENST00000394892 LRRC74BQ6ZQY2 392 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 CROCCP2Q86T23 111 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 COMTD1Q86VU5 262 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 VRK2Q86Y07 508 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 WFDC8Q8IUA0 241 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 CCDC103Q8IW40 242 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 LRRC75A-AS1Q8N1F1 130 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 CLIP4Q8N3C7 705 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 GTF2H4Q92759 462 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 PLPPR2Q96GM1 343 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 PANX1Q96RD7 426 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 PIP5K1AQ99755 562 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 EBF4Q9BQW3 602 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 PAIP1Q9H074 479 aaKnown RBP7.84□□□□□ -1.15
ATG4A-205ENST00000394892 UBTD1Q9HAC8 227 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 GP6Q9HCN6 339 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 EXOSC3Q9NQT5 275 aaKnown RBP7.84□□□□□ -1.15
ATG4A-205ENST00000394892 ZNF226Q9NYT6 803 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 SLAMF8Q9P0V8 285 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 STOML1Q9UBI4 398 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 OSGIN1Q9UJX0 560 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 GPR52Q9Y2T5 361 aa7.84□□□□□ -1.15
ATG4A-205ENST00000394892 FBN3Q75N90 2809 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 IGKV3D-15A0A087WSY6 115 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 DPRXA6NFQ7 191 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 TRPC5OSA6NMA1 111 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 ZNF724A8MTY0 619 aa7.83□□□□□ -1.16
ATG4A-205ENST00000394892 H7C1Q1 480 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms