RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 EEF1A1P68104 462 aaKnown RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 DCDP81605 110 aaKnown RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 ZFP36L1Q07352 338 aaKnown RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 NPRL3Q12980 569 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 TIMM50Q3ZCQ8 353 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 YIF1BQ5BJH7 314 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 SPANXN2Q5MJ10 180 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 DCST1Q5T197 706 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 ATAD3CQ5T2N8 411 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 PDZK1Q5T2W1 519 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 MRPL2Q5T653 305 aaKnown RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 LCE3BQ5TA77 95 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 FAM69BQ5VUD6 431 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 ZNF770Q6IQ21 691 aaPredicted RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 PODNL1Q6PEZ8 512 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 DBX2Q6ZNG2 339 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 IDO2Q6ZQW0 420 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 MEX3DQ86XN8 651 aaKnown RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 NLGN4XQ8N0W4 816 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 AGBL5Q8NDL9 886 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 OR4C3Q8NH37 302 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 SLC2A12Q8TD20 617 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 HTRA1Q92743 480 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 HOXB13Q92826 284 aaPredicted RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 PMEPA1Q969W9 287 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 ZNF578Q96N58 590 aaPredicted RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 DEPDC7Q96QD5 511 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 ARHGDIGQ99819 225 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 PELOQ9BRX2 385 aaKnown RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 NUDT9Q9BW91 350 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 NRSN2Q9GZP1 204 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 SAP130Q9H0E3 1048 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 TRIM45Q9H8W5 580 aaPredicted RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 ZNF556Q9HAH1 456 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 Q9N2J8 555 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 ABCB10Q9NRK6 738 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 MAN2C1Q9NTJ4 1040 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 SEMA4GQ9NTN9 838 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 ACAD8Q9UKU7 415 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 NDRG4Q9ULP0 352 aaKnown RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 CFL2Q9Y281 166 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 CAB39Q9Y376 341 aaPredicted RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 PCDHGB6Q9Y5F9 930 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 LOC105371267A0A1B0GV96 52 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 A0A1W2PRQ8 180 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 IDSB3KWA1 339 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 SHOXO15266 292 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 FLRT2O43155 660 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 TBX1O43435 398 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 AK1P00568 194 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 IGKV3-11P04433 115 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 DBIP07108 87 aaKnown RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 IGFBP1P08833 259 aaPredicted RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 ZNF883P0CG24 379 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 ANXA8P13928 327 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 CD59P13987 128 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 FSTP19883 344 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 AGXTP21549 392 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 ACP1P24666 158 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 GALNSP34059 522 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 SOX6P35712 828 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 MASP1P48740 699 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 CLK1P49759 484 aaKnown RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 SMIM11AP58511 58 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 RPP38P78345 283 aaKnown RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 MRPS15P82914 257 aaKnown RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 IL5RAQ01344 420 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 PLAURQ03405 335 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 TARDBPQ13148 414 aaKnown RBP eCLIP6.39□□□□□ -1.392e-10■■■■■ 60.1
RTN4-205ENST00000394609 BIKQ13323 160 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 GPR50Q13585 617 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 DGCR6Q14129 220 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 ELAVL1Q15717 326 aaKnown RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 CCDC58Q4VC31 144 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 ENTPD8Q5MY95 495 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 FAM199XQ6PEV8 388 aaPredicted RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 MED25Q71SY5 747 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 GDPD3Q7L5L3 318 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 CCDC190Q86UF4 302 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 ZBTB46Q86UZ6 589 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 CCDC28AQ8IWP9 274 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 PARP16Q8N5Y8 322 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 BCORP1Q8N888 145 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 BMPERQ8N8U9 685 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 ZNF721Q8TF20 911 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 CNOT9Q92600 299 aaKnown RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 RPL3LQ92901 407 aaKnown RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 ST6GAL2Q96JF0 529 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 PRRC1Q96M27 445 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 GAL3ST4Q96RP7 486 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 MCHR1Q99705 422 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 CCDC90BQ9GZT6 254 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 NUAK2Q9H093 628 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 RACGAP1Q9H0H5 632 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 NXF5Q9H1B4 397 aaKnown RBP6.39□□□□□ -1.39
RTN4-205ENST00000394609 RASSF1Q9NS23 344 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 PRODH2Q9UF12 536 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 CBLCQ9ULV8 474 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 GMPPBQ9Y5P6 360 aa6.39□□□□□ -1.39
RTN4-205ENST00000394609 NINQ8N4C6 2090 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms