RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 RING1Q06587 406 aa11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 RPS26P11Q5JNZ5 115 aaPredicted RBP11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 CTSL3PQ5NE16 218 aa11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 DMRTA1Q5VZB9 504 aa11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 ABHD13Q7L211 337 aa11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 FAM26EQ8N5C1 309 aa11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 OR4K2Q8NGD2 314 aa11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 OR1J4Q8NGS1 313 aa11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 OR56A3Q8NH54 315 aa11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 ZNF671Q8TAW3 534 aa11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 GEMIN6Q8WXD5 167 aaKnown RBP11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 ROBO4Q8WZ75 1007 aa11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 NTAN1Q96AB6 310 aa11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 ECHDC3Q96DC8 303 aa11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 FCRL4Q96PJ5 515 aa11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 PCYT2Q99447 389 aa11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 WFDC6Q9BQY6 131 aa11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 ACBD6Q9BR61 282 aa11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 MED10Q9BTT4 135 aa11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 CHST8Q9H2A9 424 aa11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 SFXN1Q9H9B4 322 aa11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 DBNDD1Q9H9R9 158 aa11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 FN3KRPQ9HA64 309 aa11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 BCO1Q9HAY6 547 aa11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 GPATCH2Q9NW75 528 aa11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 CD84Q9UIB8 345 aa11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 FBXW2Q9UKT8 454 aa11.64□□□□□ -0.55
SLC28A1-203ENST00000394573 USP34Q70CQ2 3546 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 NFATC1O95644 943 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 OR8G3PP0DMU2 310 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 PKMP14618 531 aaKnown RBP11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 CD200P41217 278 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 RBM34P42696 430 aaKnown RBP11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 OR1G1P47890 313 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 CDX1P47902 265 aaPredicted RBP11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 EPHB3P54753 998 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 INSM1Q01101 510 aaPredicted RBP11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 TWF1Q12792 350 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 RAB40BQ12829 278 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 BIKQ13323 160 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 PCBP2Q15366 365 aaKnown RBP eCLIP11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 ARSIQ5FYB1 569 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 DCST1Q5T197 706 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 ZNF772Q68DY9 489 aaPredicted RBP11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 OR2A2Q6IF42 318 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 SBSNQ6UWP8 590 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 NDUFAF7Q7L592 441 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 TAF8Q7Z7C8 310 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 HMGN2P46Q86SG4 172 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 HJURPQ8NCD3 748 aaPredicted RBP11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 CPEB3Q8NE35 698 aaKnown RBP11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 OR4K1Q8NGD4 311 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 SP7Q8TDD2 431 aaPredicted RBP11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 SMAP2Q8WU79 429 aaPredicted RBP11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 MAFIPQ8WZ33 124 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 IMP4Q96G21 291 aaKnown RBP11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 POLR1EQ9GZS1 481 aaKnown RBP11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 CHST6Q9GZX3 395 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 BTG4Q9NY30 223 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 NUDT4Q9NZJ9 180 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 GDF2Q9UK05 429 aaPredicted RBP11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 ZMIZ1Q9ULJ6 1067 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 KCNIP3Q9Y2W7 256 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 LOC100509620A0A075B734 347 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 M0R036 132 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 CCSO14618 274 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 EPHX1P07099 455 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 ACVR1BP36896 505 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 SCAPQ12770 1279 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 FOXO1Q12778 655 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 FAM69AQ5T7M9 428 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 NPSR1Q6W5P4 371 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 FAM98AQ8NCA5 519 aaKnown RBP11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 BBS1Q8NFJ9 593 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 GPA33Q99795 319 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 SYT17Q9BSW7 474 aa11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 PRDM5Q9NQX1 630 aaPredicted RBP11.63□□□□□ -0.55
SLC28A1-203ENST00000394573 A0A1W2PPE2 198 aa11.62□□□□□ -0.55
SLC28A1-203ENST00000394573 BCL2L11O43521 198 aa11.62□□□□□ -0.55
SLC28A1-203ENST00000394573 RAB4AP20338 218 aa11.62□□□□□ -0.55
SLC28A1-203ENST00000394573 ELAVL4P26378 380 aaKnown RBP11.62□□□□□ -0.55
SLC28A1-203ENST00000394573 CD80P33681 288 aa11.62□□□□□ -0.55
SLC28A1-203ENST00000394573 DLSTP36957 453 aa11.62□□□□□ -0.55
SLC28A1-203ENST00000394573 SCNN1AP37088 669 aa11.62□□□□□ -0.55
SLC28A1-203ENST00000394573 GIPRP48546 466 aa11.62□□□□□ -0.55
SLC28A1-203ENST00000394573 LHX1P48742 406 aa11.62□□□□□ -0.55
SLC28A1-203ENST00000394573 ZNF750Q32MQ0 723 aa11.62□□□□□ -0.55
SLC28A1-203ENST00000394573 SLC35D3Q5M8T2 416 aa11.62□□□□□ -0.55
SLC28A1-203ENST00000394573 NSUN5P2Q63ZY6 315 aa11.62□□□□□ -0.55
SLC28A1-203ENST00000394573 NOXRED1Q6NXP6 359 aa11.62□□□□□ -0.55
SLC28A1-203ENST00000394573 RPTNQ6XPR3 784 aa11.62□□□□□ -0.55
SLC28A1-203ENST00000394573 BEST3Q8N1M1 668 aa11.62□□□□□ -0.55
SLC28A1-203ENST00000394573 LGALS14Q8TCE9 139 aa11.62□□□□□ -0.55
SLC28A1-203ENST00000394573 TCTN2Q96GX1 697 aa11.62□□□□□ -0.55
SLC28A1-203ENST00000394573 ZNF354BQ96LW1 612 aa11.62□□□□□ -0.55
SLC28A1-203ENST00000394573 MESP1Q9BRJ9 268 aa11.62□□□□□ -0.55
SLC28A1-203ENST00000394573 TMEM208Q9BTX3 173 aa11.62□□□□□ -0.55
SLC28A1-203ENST00000394573 RHOFQ9HBH0 211 aa11.62□□□□□ -0.55
SLC28A1-203ENST00000394573 TMEM248Q9NWD8 314 aa11.62□□□□□ -0.55
SLC28A1-203ENST00000394573 PARPBPQ9NWS1 579 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms