RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 ERVMER34-1Q9H9K5 563 aa13.78□□□□□ -0.2
SCFD2-201ENST00000388940 RBFOX1Q9NWB1 397 aaKnown RBP13.78□□□□□ -0.2
SCFD2-201ENST00000388940 ZMIZ1Q9ULJ6 1067 aa13.78□□□□□ -0.2
SCFD2-201ENST00000388940 MRPS33Q9Y291 106 aaKnown RBP13.78□□□□□ -0.2
SCFD2-201ENST00000388940 SHISA7A6NL88 538 aa13.77□□□□□ -0.21
SCFD2-201ENST00000388940 DVL2O14641 736 aa13.77□□□□□ -0.21
SCFD2-201ENST00000388940 TFECO14948 347 aaPredicted RBP13.77□□□□□ -0.21
SCFD2-201ENST00000388940 TPPPO94811 219 aa13.77□□□□□ -0.21
SCFD2-201ENST00000388940 HLA-DMAP28067 261 aa13.77□□□□□ -0.21
SCFD2-201ENST00000388940 QPRTQ15274 297 aa13.77□□□□□ -0.21
SCFD2-201ENST00000388940 COL13A1Q5TAT6 717 aaPredicted RBP13.77□□□□□ -0.21
SCFD2-201ENST00000388940 PXKQ7Z7A4 578 aa13.77□□□□□ -0.21
SCFD2-201ENST00000388940 NR2C2APQ86WQ0 139 aa13.77□□□□□ -0.21
SCFD2-201ENST00000388940 GATAD2AQ86YP4 633 aa13.77□□□□□ -0.21
SCFD2-201ENST00000388940 SLC44A3Q8N4M1 653 aa13.77□□□□□ -0.21
SCFD2-201ENST00000388940 ZNF614Q8N883 585 aa13.77□□□□□ -0.21
SCFD2-201ENST00000388940 TEX19Q8NA77 164 aa13.77□□□□□ -0.21
SCFD2-201ENST00000388940 OR4N2Q8NGD1 307 aa13.77□□□□□ -0.21
SCFD2-201ENST00000388940 ENKURQ8TC29 256 aa13.77□□□□□ -0.21
SCFD2-201ENST00000388940 ZNF578Q96N58 590 aaPredicted RBP13.77□□□□□ -0.21
SCFD2-201ENST00000388940 A0A0A6YYC8 382 aaPredicted RBP13.76□□□□□ -0.21
SCFD2-201ENST00000388940 E9PI62 339 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 TGFBR3LH3BV60 316 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 I3L1I5 382 aaPredicted RBP13.76□□□□□ -0.21
SCFD2-201ENST00000388940 FOXS1O43638 330 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 PRKAR1AP10644 381 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 RFX3P48380 749 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 ATP12AP54707 1039 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 STX4Q12846 297 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 DEFB110Q30KQ9 67 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 DMKNQ6E0U4 476 aaPredicted RBP13.76□□□□□ -0.21
SCFD2-201ENST00000388940 FAAH2Q6GMR7 532 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 LRRC28Q86X40 367 aaPredicted RBP13.76□□□□□ -0.21
SCFD2-201ENST00000388940 ABHD4Q8TB40 342 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 FAM174AQ8TBP5 190 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 SLC7A6Q92536 515 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 TOE1Q96GM8 510 aaKnown RBP13.76□□□□□ -0.21
SCFD2-201ENST00000388940 GAS2L1Q99501 681 aaPredicted RBP13.76□□□□□ -0.21
SCFD2-201ENST00000388940 CAPN10Q9HC96 672 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 B3GAT2Q9NPZ5 323 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 CYSLTR2Q9NS75 346 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 CHRNA9Q9UGM1 479 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 KLHL21Q9UJP4 597 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 ICAM5Q9UMF0 924 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 PRELID1Q9Y255 219 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 EFCAB7A8K855 629 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 HRO43593 1189 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 PRAMEF2O60811 474 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 FAM157BP0CG42 384 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 CHRNB1P11230 501 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 ELK1P19419 428 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 MLLT3P42568 568 aaPredicted RBP13.76□□□□□ -0.21
SCFD2-201ENST00000388940 GPR143P51810 404 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 SLC16A1P53985 500 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 CRYZQ08257 329 aaKnown RBP13.76□□□□□ -0.21
SCFD2-201ENST00000388940 SF3A2Q15428 464 aaKnown RBP13.76□□□□□ -0.21
SCFD2-201ENST00000388940 TBRG1Q3YBR2 411 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 FAM209AQ5JX71 171 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 FCRLBQ6BAA4 426 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 ARL9Q6T311 187 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 PLET1Q6UQ28 207 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 NPSR1Q6W5P4 371 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 MS4A15Q8N5U1 240 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 FRMD1Q8N878 549 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 SMRP1Q8NCR6 262 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 RCBTB1Q8NDN9 531 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 OR5M3Q8NGP4 307 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 TP53INP1Q96A56 240 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 C4orf36Q96KX1 117 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 TTYH2Q9BSA4 534 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 Q9N2J8 555 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 CLDN16Q9Y5I7 305 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 TDRD6O60522 2096 aaKnown RBP13.76□□□□□ -0.21
SCFD2-201ENST00000388940 CACNA1IQ9P0X4 2223 aa13.76□□□□□ -0.21
SCFD2-201ENST00000388940 SLC9B1P1A6NJY1 282 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 IDH3BO43837 385 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 NDUFB2O95178 105 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 MRPL3P09001 348 aaKnown RBP13.75□□□□□ -0.21
SCFD2-201ENST00000388940 CLUP10909 449 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 SHC1P29353 583 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 THBS2P35442 1172 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 GPR3P46089 330 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 NRG3P56975 720 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 C1orf61Q13536 156 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 FAM53BQ14153 422 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 GGTLC2Q14390 218 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 SF3B4Q15427 424 aaKnown RBP eCLIP13.75□□□□□ -0.21
SCFD2-201ENST00000388940 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.75□□□□□ -0.21
SCFD2-201ENST00000388940 IDNKQ5T6J7 187 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 LSRQ86X29 649 aaPredicted RBP13.75□□□□□ -0.21
SCFD2-201ENST00000388940 AVL9Q8NBF6 648 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 CYB561A3Q8NBI2 242 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 NLGN4YQ8NFZ3 816 aaPredicted RBP13.75□□□□□ -0.21
SCFD2-201ENST00000388940 OR6C4Q8NGE1 309 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 CAPSLQ8WWF8 208 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 ARSGQ96EG1 525 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 TCTN2Q96GX1 697 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 PGLYRP3Q96LB9 341 aa13.75□□□□□ -0.21
SCFD2-201ENST00000388940 PPIL3Q9H2H8 161 aaKnown RBP13.75□□□□□ -0.21
SCFD2-201ENST00000388940 TP63Q9H3D4 680 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms