RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 ZNF763Q0D2J5 394 aa0.89□□□□□ -2.27
RNU6-1040P-201ENST00000383974 PPP2R5CQ13362 524 aa0.89□□□□□ -2.27
RNU6-1040P-201ENST00000383974 SNTB2Q13425 540 aaKnown RBP0.89□□□□□ -2.27
RNU6-1040P-201ENST00000383974 SCARB2Q14108 478 aa0.89□□□□□ -2.27
RNU6-1040P-201ENST00000383974 NDUFA9Q16795 377 aa0.89□□□□□ -2.27
RNU6-1040P-201ENST00000383974 TMEM184AQ6ZMB5 413 aa0.89□□□□□ -2.27
RNU6-1040P-201ENST00000383974 TOM1L2Q6ZVM7 507 aa0.89□□□□□ -2.27
RNU6-1040P-201ENST00000383974 LINC01561Q8N1V8 128 aa0.89□□□□□ -2.27
RNU6-1040P-201ENST00000383974 LEMD2Q8NC56 503 aa0.89□□□□□ -2.27
RNU6-1040P-201ENST00000383974 M1APQ8TC57 530 aa0.89□□□□□ -2.27
RNU6-1040P-201ENST00000383974 DTX3LQ8TDB6 740 aa0.89□□□□□ -2.27
RNU6-1040P-201ENST00000383974 UPRTQ96BW1 309 aa0.89□□□□□ -2.27
RNU6-1040P-201ENST00000383974 OR5B2Q96R09 309 aa0.89□□□□□ -2.27
RNU6-1040P-201ENST00000383974 FOXC2Q99958 501 aa0.89□□□□□ -2.27
RNU6-1040P-201ENST00000383974 GAL3ST1Q99999 423 aa0.89□□□□□ -2.27
RNU6-1040P-201ENST00000383974 WRAP53Q9BUR4 548 aaKnown RBP0.89□□□□□ -2.27
RNU6-1040P-201ENST00000383974 SIRPDQ9H106 197 aa0.89□□□□□ -2.27
RNU6-1040P-201ENST00000383974 TRPV5Q9NQA5 729 aa0.89□□□□□ -2.27
RNU6-1040P-201ENST00000383974 CCL28Q9NRJ3 127 aa0.89□□□□□ -2.27
RNU6-1040P-201ENST00000383974 HOMER3Q9NSC5 361 aa0.89□□□□□ -2.27
RNU6-1040P-201ENST00000383974 C1orf123Q9NWV4 160 aa0.89□□□□□ -2.27
RNU6-1040P-201ENST00000383974 WRAP73Q9P2S5 460 aaPredicted RBP0.89□□□□□ -2.27
RNU6-1040P-201ENST00000383974 YEATS2Q9ULM3 1422 aa0.89□□□□□ -2.27
RNU6-1040P-201ENST00000383974 A0A0U1RQG5 324 aaPredicted RBP0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 IDSB3KWA1 339 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 RRP8O43159 456 aaKnown RBP0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 SUPT3HO75486 399 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 MPZL1O95297 269 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 GSTT2P0CG29 244 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 GSTT2BP0CG30 244 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 ZCCHC18P0CG32 403 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 PPIAL4GP0DN37 164 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 PDHBP11177 359 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 KIR3DL2P43630 455 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 HNRNPFP52597 415 aaKnown RBP0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 BIDP55957 195 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 KIAA1024LP59773 190 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 TAF9Q16594 264 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 TMEM183BQ1AE95 376 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 TIGITQ495A1 244 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 SPIN3Q5JUX0 258 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 NCR3LG1Q68D85 454 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 FRMPD2BQ6IN97 320 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 TMEM183AQ8IXX5 376 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 UBALD2Q8IYN6 164 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 OR6C4Q8NGE1 309 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 BRSK1Q8TDC3 778 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 ST7LQ8TDW4 575 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 EXOSC8Q96B26 276 aaKnown RBP0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 ASB9Q96DX5 294 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 RBMXL1Q96E39 390 aaKnown RBP0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 BMFQ96LC9 184 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 FTHL17Q9BXU8 183 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 CRNKL1Q9BZJ0 848 aaKnown RBP0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 NGBQ9NPG2 151 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 ZNF226Q9NYT6 803 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 OR12D3Q9UGF7 316 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 CYTH4Q9UIA0 394 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 SHROOM3Q8TF72 1996 aa0.88□□□□□ -2.27
RNU6-1040P-201ENST00000383974 PIKFYVEQ9Y2I7 2098 aa0.87□□□□□ -2.27
RNU6-1040P-201ENST00000383974 E9PMD0 336 aa0.87□□□□□ -2.27
RNU6-1040P-201ENST00000383974 SGK494L7N484 410 aa0.87□□□□□ -2.27
RNU6-1040P-201ENST00000383974 KIF2AO00139 706 aaPredicted RBP0.87□□□□□ -2.27
RNU6-1040P-201ENST00000383974 ADAM12O43184 909 aa0.87□□□□□ -2.27
RNU6-1040P-201ENST00000383974 HBQ1P09105 142 aa0.87□□□□□ -2.27
RNU6-1040P-201ENST00000383974 RBMY1CP0DJD4 496 aa0.87□□□□□ -2.27
RNU6-1040P-201ENST00000383974 TDGF1P13385 188 aa0.87□□□□□ -2.27
RNU6-1040P-201ENST00000383974 PGAM1P18669 254 aa0.87□□□□□ -2.27
RNU6-1040P-201ENST00000383974 TDGF1P3P51864 188 aa0.87□□□□□ -2.27
RNU6-1040P-201ENST00000383974 SPIBQ01892 262 aa0.87□□□□□ -2.27
RNU6-1040P-201ENST00000383974 LAGE3Q14657 143 aa0.87□□□□□ -2.27
RNU6-1040P-201ENST00000383974 KLF17Q5JT82 389 aaPredicted RBP0.87□□□□□ -2.27
RNU6-1040P-201ENST00000383974 FAM159AQ6UWV7 190 aa0.87□□□□□ -2.27
RNU6-1040P-201ENST00000383974 ACOT7LQ6ZUV0 252 aa0.87□□□□□ -2.27
RNU6-1040P-201ENST00000383974 PGAM4Q8N0Y7 254 aa0.87□□□□□ -2.27
RNU6-1040P-201ENST00000383974 CNIH3Q8TBE1 160 aa0.87□□□□□ -2.27
RNU6-1040P-201ENST00000383974 ZFP90Q8TF47 636 aa0.87□□□□□ -2.27
RNU6-1040P-201ENST00000383974 ESR2Q92731 530 aa0.87□□□□□ -2.27
RNU6-1040P-201ENST00000383974 GRPEL1Q9HAV7 217 aa0.87□□□□□ -2.27
RNU6-1040P-201ENST00000383974 SMPD3Q9NY59 655 aaPredicted RBP0.87□□□□□ -2.27
RNU6-1040P-201ENST00000383974 ZNF222Q9UK12 451 aa0.87□□□□□ -2.27
RNU6-1040P-201ENST00000383974 PCNX2A6NKB5 2137 aa0.86□□□□□ -2.27
RNU6-1040P-201ENST00000383974 SDK2Q58EX2 2172 aa0.86□□□□□ -2.27
RNU6-1040P-201ENST00000383974 SHANK1Q9Y566 2161 aa0.86□□□□□ -2.27
RNU6-1040P-201ENST00000383974 IGLV3-12A0A075B6K2 115 aa0.86□□□□□ -2.27
RNU6-1040P-201ENST00000383974 A6NIZ1 184 aa0.86□□□□□ -2.27
RNU6-1040P-201ENST00000383974 FAM74A7A6NL05 159 aa0.86□□□□□ -2.27
RNU6-1040P-201ENST00000383974 LRRC30A6NM36 301 aa0.86□□□□□ -2.27
RNU6-1040P-201ENST00000383974 WASHC1A8K0Z3 465 aa0.86□□□□□ -2.27
RNU6-1040P-201ENST00000383974 TPST2O60704 377 aa0.86□□□□□ -2.27
RNU6-1040P-201ENST00000383974 LGI1O95970 557 aa0.86□□□□□ -2.27
RNU6-1040P-201ENST00000383974 IGLV2-23P01705 113 aa0.86□□□□□ -2.27
RNU6-1040P-201ENST00000383974 TLX1NBP0CAT3 122 aa0.86□□□□□ -2.27
RNU6-1040P-201ENST00000383974 ATP6V1B2P21281 511 aa0.86□□□□□ -2.27
RNU6-1040P-201ENST00000383974 PRDX2P32119 198 aa0.86□□□□□ -2.27
RNU6-1040P-201ENST00000383974 UBE2AP49459 152 aa0.86□□□□□ -2.27
RNU6-1040P-201ENST00000383974 NUMBP49757 651 aa0.86□□□□□ -2.27
RNU6-1040P-201ENST00000383974 KPNA2P52292 529 aaKnown RBP0.86□□□□□ -2.27
RNU6-1040P-201ENST00000383974 SRP54P61011 504 aaKnown RBP0.86□□□□□ -2.27
RNU6-1040P-201ENST00000383974 RAP1BP61224 184 aa0.86□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms