RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 ZNF607Q96SK3 696 aa17.46■□□□□ 0.39
GTF3A-201ENST00000381140 SPATA5L1Q9BVQ7 753 aa17.46■□□□□ 0.39
GTF3A-201ENST00000381140 SPATA9Q9BWV2 254 aa17.46■□□□□ 0.39
GTF3A-201ENST00000381140 PINK1Q9BXM7 581 aa17.46■□□□□ 0.39
GTF3A-201ENST00000381140 ARMC7Q9H6L4 198 aa17.46■□□□□ 0.39
GTF3A-201ENST00000381140 Q9UFV3 132 aa17.46■□□□□ 0.39
GTF3A-201ENST00000381140 PACSIN3Q9UKS6 424 aa17.46■□□□□ 0.39
GTF3A-201ENST00000381140 POMPQ9Y244 141 aa17.46■□□□□ 0.39
GTF3A-201ENST00000381140 USP9YO00507 2555 aaPredicted RBP17.45■□□□□ 0.38
GTF3A-201ENST00000381140 FAM90A27PA6NNH2 459 aa17.45■□□□□ 0.38
GTF3A-201ENST00000381140 TNFSF11O14788 317 aa17.45■□□□□ 0.38
GTF3A-201ENST00000381140 FRS3O43559 492 aa17.45■□□□□ 0.38
GTF3A-201ENST00000381140 EFNA2O43921 213 aa17.45■□□□□ 0.38
GTF3A-201ENST00000381140 SHC1P29353 583 aa17.45■□□□□ 0.38
GTF3A-201ENST00000381140 EIF1AXP47813 144 aaKnown RBP17.45■□□□□ 0.38
GTF3A-201ENST00000381140 RPS3AP61247 264 aaKnown RBP17.45■□□□□ 0.38
GTF3A-201ENST00000381140 RAC1P63000 192 aa17.45■□□□□ 0.38
GTF3A-201ENST00000381140 LIPEQ05469 1076 aa17.45■□□□□ 0.38
GTF3A-201ENST00000381140 RBBP4Q09028 425 aa17.45■□□□□ 0.38
GTF3A-201ENST00000381140 BNIP2Q12982 314 aa17.45■□□□□ 0.38
GTF3A-201ENST00000381140 CDSNQ15517 529 aa17.45■□□□□ 0.38
GTF3A-201ENST00000381140 RNF220Q5VTB9 566 aa17.45■□□□□ 0.38
GTF3A-201ENST00000381140 SERPINA11Q86U17 422 aa17.45■□□□□ 0.38
GTF3A-201ENST00000381140 GGNQ86UU5 652 aa17.45■□□□□ 0.38
GTF3A-201ENST00000381140 LSRQ86X29 649 aaPredicted RBP17.45■□□□□ 0.38
GTF3A-201ENST00000381140 RNF148Q8N7C7 305 aa17.45■□□□□ 0.38
GTF3A-201ENST00000381140 C9orf106Q8NAJ2 232 aa17.45■□□□□ 0.38
GTF3A-201ENST00000381140 CA5BP1Q8WTZ4 195 aa17.45■□□□□ 0.38
GTF3A-201ENST00000381140 CCDC124Q96CT7 223 aaKnown RBP17.45■□□□□ 0.38
GTF3A-201ENST00000381140 ASB9Q96DX5 294 aa17.45■□□□□ 0.38
GTF3A-201ENST00000381140 ZNF845Q96IR2 970 aaPredicted RBP17.45■□□□□ 0.38
GTF3A-201ENST00000381140 PSMG3-AS1Q96PY0 264 aa17.45■□□□□ 0.38
GTF3A-201ENST00000381140 ALG2Q9H553 416 aa17.45■□□□□ 0.38
GTF3A-201ENST00000381140 DENND2DQ9H6A0 471 aaPredicted RBP17.45■□□□□ 0.38
GTF3A-201ENST00000381140 CALHM2Q9HA72 323 aa17.45■□□□□ 0.38
GTF3A-201ENST00000381140 ACER3Q9NUN7 267 aa17.45■□□□□ 0.38
GTF3A-201ENST00000381140 USP22Q9UPT9 525 aa17.45■□□□□ 0.38
GTF3A-201ENST00000381140 UTP20O75691 2785 aaKnown RBP17.45■□□□□ 0.38
GTF3A-201ENST00000381140 CD8B2A6NJW9 211 aa17.44■□□□□ 0.38
GTF3A-201ENST00000381140 TOXO94900 526 aa17.44■□□□□ 0.38
GTF3A-201ENST00000381140 CLDN1O95832 211 aa17.44■□□□□ 0.38
GTF3A-201ENST00000381140 IL2RAP01589 272 aa17.44■□□□□ 0.38
GTF3A-201ENST00000381140 OPN1SWP03999 348 aa17.44■□□□□ 0.38
GTF3A-201ENST00000381140 UQCRBP14927 111 aa17.44■□□□□ 0.38
GTF3A-201ENST00000381140 CCNA2P20248 432 aa17.44■□□□□ 0.38
GTF3A-201ENST00000381140 ELK4P28324 431 aa17.44■□□□□ 0.38
GTF3A-201ENST00000381140 ADH6P28332 368 aa17.44■□□□□ 0.38
GTF3A-201ENST00000381140 CHRNB4P30926 498 aa17.44■□□□□ 0.38
GTF3A-201ENST00000381140 PCGF2P35227 344 aa17.44■□□□□ 0.38
GTF3A-201ENST00000381140 GSK3BP49841 420 aa17.44■□□□□ 0.38
GTF3A-201ENST00000381140 EPS8Q12929 822 aa17.44■□□□□ 0.38
GTF3A-201ENST00000381140 TRIM25Q14258 630 aaKnown RBP17.44■□□□□ 0.38
GTF3A-201ENST00000381140 FXNQ16595 210 aa17.44■□□□□ 0.38
GTF3A-201ENST00000381140 SLC25A53Q5H9E4 307 aa17.44■□□□□ 0.38
GTF3A-201ENST00000381140 RIPPLY2Q5TAB7 128 aa17.44■□□□□ 0.38
GTF3A-201ENST00000381140 C1orf146Q5VVC0 180 aa17.44■□□□□ 0.38
GTF3A-201ENST00000381140 PLEKHM3Q6ZWE6 761 aa17.44■□□□□ 0.38
GTF3A-201ENST00000381140 ARMC8Q8IUR7 673 aa17.44■□□□□ 0.38
GTF3A-201ENST00000381140 ZNF440Q8IYI8 595 aa17.44■□□□□ 0.38
GTF3A-201ENST00000381140 CADM2Q8N3J6 435 aa17.44■□□□□ 0.38
GTF3A-201ENST00000381140 ASB5Q8WWX0 329 aa17.44■□□□□ 0.38
GTF3A-201ENST00000381140 MUC13Q9H3R2 512 aa17.44■□□□□ 0.38
GTF3A-201ENST00000381140 CHST2Q9Y4C5 530 aa17.44■□□□□ 0.38
GTF3A-201ENST00000381140 A0A0J9YW62 118 aa17.43■□□□□ 0.38
GTF3A-201ENST00000381140 SLC22A20A6NK97 555 aa17.43■□□□□ 0.38
GTF3A-201ENST00000381140 CXCL13O43927 109 aa17.43■□□□□ 0.38
GTF3A-201ENST00000381140 TPST1O60507 370 aa17.43■□□□□ 0.38
GTF3A-201ENST00000381140 SERPINB7O75635 380 aa17.43■□□□□ 0.38
GTF3A-201ENST00000381140 NTN1O95631 604 aa17.43■□□□□ 0.38
GTF3A-201ENST00000381140 PRG2P13727 222 aa17.43■□□□□ 0.38
GTF3A-201ENST00000381140 HTR1EP28566 365 aa17.43■□□□□ 0.38
GTF3A-201ENST00000381140 GZMMP51124 257 aa17.43■□□□□ 0.38
GTF3A-201ENST00000381140 ACTR3P61158 418 aa17.43■□□□□ 0.38
GTF3A-201ENST00000381140 TRAP1Q12931 704 aaKnown RBP17.43■□□□□ 0.38
GTF3A-201ENST00000381140 SELENBP1Q13228 472 aa17.43■□□□□ 0.38
GTF3A-201ENST00000381140 VMACQ2NL98 169 aa17.43■□□□□ 0.38
GTF3A-201ENST00000381140 TMEM176BQ3YBM2 270 aaPredicted RBP17.43■□□□□ 0.38
GTF3A-201ENST00000381140 HBMQ6B0K9 141 aa17.43■□□□□ 0.38
GTF3A-201ENST00000381140 MAMDC2Q7Z304 686 aaPredicted RBP17.43■□□□□ 0.38
GTF3A-201ENST00000381140 ZNF550Q7Z398 422 aa17.43■□□□□ 0.38
GTF3A-201ENST00000381140 CALHM3Q86XJ0 350 aa17.43■□□□□ 0.38
GTF3A-201ENST00000381140 SMYD1Q8NB12 490 aa17.43■□□□□ 0.38
GTF3A-201ENST00000381140 NAXEQ8NCW5 288 aa17.43■□□□□ 0.38
GTF3A-201ENST00000381140 OR10D3Q8NH80 312 aa17.43■□□□□ 0.38
GTF3A-201ENST00000381140 OR2V1Q8NHB1 315 aa17.43■□□□□ 0.38
GTF3A-201ENST00000381140 FIG4Q92562 907 aa17.43■□□□□ 0.38
GTF3A-201ENST00000381140 KLHL15Q96M94 604 aa17.43■□□□□ 0.38
GTF3A-201ENST00000381140 CTPS2Q9NRF8 586 aa17.43■□□□□ 0.38
GTF3A-201ENST00000381140 CLCF1Q9UBD9 225 aa17.43■□□□□ 0.38
GTF3A-201ENST00000381140 PLEKHB1Q9UF11 243 aaPredicted RBP17.43■□□□□ 0.38
GTF3A-201ENST00000381140 SLC13A4Q9UKG4 626 aa17.43■□□□□ 0.38
GTF3A-201ENST00000381140 HCFC1P51610 2035 aa17.43■□□□□ 0.38
GTF3A-201ENST00000381140 FAM220BPB1ANY3 271 aa17.42■□□□□ 0.38
GTF3A-201ENST00000381140 ACOT8O14734 319 aa17.42■□□□□ 0.38
GTF3A-201ENST00000381140 CLDN14O95500 239 aa17.42■□□□□ 0.38
GTF3A-201ENST00000381140 TGM6O95932 706 aa17.42■□□□□ 0.38
GTF3A-201ENST00000381140 TFPIP10646 304 aa17.42■□□□□ 0.38
GTF3A-201ENST00000381140 SLC7A1P30825 629 aa17.42■□□□□ 0.38
GTF3A-201ENST00000381140 PRKAR1BP31321 381 aa17.42■□□□□ 0.38
GTF3A-201ENST00000381140 AGFG1P52594 562 aaKnown RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms