RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 CCDC159P0C7I6 412 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 TACR3P29371 465 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 CASP3P42574 277 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 ST13P50502 369 aaKnown RBP17.88■□□□□ 0.45
CCM2-202ENST00000381112 CDH15P55291 814 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 CXCR4P61073 352 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 TOP3AQ13472 1001 aaPredicted RBP17.88■□□□□ 0.45
CCM2-202ENST00000381112 QPRTQ15274 297 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 TGIF1Q15583 401 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 ELOA3BQ3SY89 546 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 OR5M10Q6IEU7 315 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 IL20RBQ6UXL0 311 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 ELOA3Q8NG57 546 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 TEX47Q8TBZ9 253 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 OSTF1Q92882 214 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 IP6K3Q96PC2 410 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 TMEM43Q9BTV4 400 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 SLC25A19Q9HC21 320 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 CDV3Q9UKY7 258 aaKnown RBP17.88■□□□□ 0.45
CCM2-202ENST00000381112 CDH10Q9Y6N8 788 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 IGLV3-32A0A0A0MS00 114 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 ENO4A6NNW6 628 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 M0R129 80 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 FUT1P19526 365 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 FMO3P31513 532 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 HLCSP50747 726 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 SUMO3P55854 103 aaPredicted RBP17.88■□□□□ 0.45
CCM2-202ENST00000381112 CRYZQ08257 329 aaKnown RBP17.88■□□□□ 0.45
CCM2-202ENST00000381112 TMEM81Q6P7N7 255 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 CCDC103Q8IW40 242 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 PSMF1Q92530 271 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 KIAA1143Q96AT1 154 aaPredicted RBP17.88■□□□□ 0.45
CCM2-202ENST00000381112 SECISBP2Q96T21 854 aaKnown RBP17.88■□□□□ 0.45
CCM2-202ENST00000381112 SH2D2AQ9NP31 389 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 HRH3Q9Y5N1 445 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 WIF1Q9Y5W5 379 aa17.88■□□□□ 0.45
CCM2-202ENST00000381112 ANKUB1A6NFN9 424 aa17.87■□□□□ 0.45
CCM2-202ENST00000381112 EFCAB9A8MZ26 197 aa17.87■□□□□ 0.45
CCM2-202ENST00000381112 CDC40O60508 579 aaKnown RBP eCLIP17.87■□□□□ 0.45
CCM2-202ENST00000381112 GP1BBP13224 206 aa17.87■□□□□ 0.45
CCM2-202ENST00000381112 ATP6V1B1P15313 513 aa17.87■□□□□ 0.45
CCM2-202ENST00000381112 SMSP52788 366 aa17.87■□□□□ 0.45
CCM2-202ENST00000381112 TEKQ02763 1124 aa17.87■□□□□ 0.45
CCM2-202ENST00000381112 SNTA1Q13424 505 aa17.87■□□□□ 0.45
CCM2-202ENST00000381112 SMN1Q16637 294 aaKnown RBP17.87■□□□□ 0.45
CCM2-202ENST00000381112 ACSM5Q6NUN0 579 aa17.87■□□□□ 0.45
CCM2-202ENST00000381112 BPIFB6Q8NFQ5 453 aa17.87■□□□□ 0.45
CCM2-202ENST00000381112 BRIX1Q8TDN6 353 aaKnown RBP17.87■□□□□ 0.45
CCM2-202ENST00000381112 SDHAF3Q9NRP4 125 aa17.87■□□□□ 0.45
CCM2-202ENST00000381112 TAS2R10Q9NYW0 307 aa17.87■□□□□ 0.45
CCM2-202ENST00000381112 OSGIN1Q9UJX0 560 aa17.87■□□□□ 0.45
CCM2-202ENST00000381112 EXPH5Q8NEV8 1989 aa17.87■□□□□ 0.45
CCM2-202ENST00000381112 TRIM64CA6NLI5 447 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 CLPTM1O96005 669 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 IGF2P01344 180 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 SAGP10523 405 aaPredicted RBP17.86■□□□□ 0.45
CCM2-202ENST00000381112 FXYD6P3P58550 94 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 CAMK2BQ13554 666 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 B3GNTL1Q67FW5 361 aaPredicted RBP17.86■□□□□ 0.45
CCM2-202ENST00000381112 JMJD6Q6NYC1 403 aaPredicted RBP17.86■□□□□ 0.45
CCM2-202ENST00000381112 SLC27A4Q6P1M0 643 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 PTCHD4Q6ZW05 846 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 TMEM156Q8N614 296 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 SIRT6Q8N6T7 355 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 OR13C2Q8NGS9 318 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 CPNE5Q9HCH3 593 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 MED11Q9P086 117 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 PPP4R1LQ9P1A2 415 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 BLOC1S6Q9UL45 172 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 SIGLEC7Q9Y286 467 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 HEATR5AQ86XA9 2040 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 HTR3EA5X5Y0 456 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 XPNPEP2O43895 674 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 MPZL2O60487 215 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 WISP1O95388 367 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 LIPCP11150 499 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 LIFP15018 202 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 MSX1P28360 303 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 SNRPGP62308 76 aaKnown RBP17.86■□□□□ 0.45
CCM2-202ENST00000381112 ACER2Q5QJU3 275 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 DCAF10Q5QP82 559 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 CASP12Q6UXS9 341 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 TRUB1Q8WWH5 349 aaKnown RBP17.86■□□□□ 0.45
CCM2-202ENST00000381112 NTNG2Q96CW9 530 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 SGTBQ96EQ0 304 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 SAMD8Q96LT4 415 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 FRMD6Q96NE9 622 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 TSSK6Q9BXA6 273 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 TBC1D23Q9NUY8 699 aa17.86■□□□□ 0.45
CCM2-202ENST00000381112 TUBA8Q9NY65 449 aaPredicted RBP17.86■□□□□ 0.45
CCM2-202ENST00000381112 A0A087WXM4 84 aa17.85■□□□□ 0.45
CCM2-202ENST00000381112 PTP4A3O75365 173 aa17.85■□□□□ 0.45
CCM2-202ENST00000381112 TFAP2AP05549 437 aa17.85■□□□□ 0.45
CCM2-202ENST00000381112 GABARAPL2P60520 117 aa17.85■□□□□ 0.45
CCM2-202ENST00000381112 TUBA4AP68366 448 aa17.85■□□□□ 0.45
CCM2-202ENST00000381112 RTP5Q14D33 572 aa17.85■□□□□ 0.45
CCM2-202ENST00000381112 CLEC12AQ5QGZ9 265 aa17.85■□□□□ 0.45
CCM2-202ENST00000381112 ZNF468Q5VIY5 522 aaPredicted RBP17.85■□□□□ 0.45
CCM2-202ENST00000381112 GRINAQ7Z429 371 aa17.85■□□□□ 0.45
CCM2-202ENST00000381112 OR4Q3Q8NH05 313 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms