RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 SSX6Q7RTT6 188 aa10.53□□□□□ -0.72
RPGR-203ENST00000378505 LSM14AQ8ND56 463 aaKnown RBP10.53□□□□□ -0.72
RPGR-203ENST00000378505 OR5H2Q8NGV7 314 aa10.53□□□□□ -0.72
RPGR-203ENST00000378505 LINC01599Q8WXQ3 324 aa10.53□□□□□ -0.72
RPGR-203ENST00000378505 OBP2AQ9NY56 170 aa10.53□□□□□ -0.72
RPGR-203ENST00000378505 VDAC3Q9Y277 283 aa10.53□□□□□ -0.72
RPGR-203ENST00000378505 PCDHGA6Q9Y5G7 932 aa10.53□□□□□ -0.72
RPGR-203ENST00000378505 VSTM5A8MXK1 200 aa10.52□□□□□ -0.72
RPGR-203ENST00000378505 H3BUI4 141 aa10.52□□□□□ -0.72
RPGR-203ENST00000378505 ARPC1BO15143 372 aaKnown RBP10.52□□□□□ -0.72
RPGR-203ENST00000378505 SEC14L5O43304 696 aa10.52□□□□□ -0.72
RPGR-203ENST00000378505 FZD6O60353 706 aa10.52□□□□□ -0.72
RPGR-203ENST00000378505 RFPL3O75679 317 aa10.52□□□□□ -0.72
RPGR-203ENST00000378505 DIRAS3O95661 229 aa10.52□□□□□ -0.72
RPGR-203ENST00000378505 RAB40ALP0C0E4 278 aa10.52□□□□□ -0.72
RPGR-203ENST00000378505 TMEM225BP0DP42 221 aa10.52□□□□□ -0.72
RPGR-203ENST00000378505 FPR3P25089 353 aa10.52□□□□□ -0.72
RPGR-203ENST00000378505 GIFP27352 417 aa10.52□□□□□ -0.72
RPGR-203ENST00000378505 HTR3AP46098 478 aa10.52□□□□□ -0.72
RPGR-203ENST00000378505 LSSP48449 732 aa10.52□□□□□ -0.72
RPGR-203ENST00000378505 SNRPGP62308 76 aaKnown RBP10.52□□□□□ -0.72
RPGR-203ENST00000378505 CYCSP99999 105 aaKnown RBP10.52□□□□□ -0.72
RPGR-203ENST00000378505 ANKRD33Q7Z3H0 272 aa10.52□□□□□ -0.72
RPGR-203ENST00000378505 KIF18BQ86Y91 864 aa10.52□□□□□ -0.72
RPGR-203ENST00000378505 SPNS2Q8IVW8 549 aa10.52□□□□□ -0.72
RPGR-203ENST00000378505 GALNT6Q8NCL4 622 aa10.52□□□□□ -0.72
RPGR-203ENST00000378505 RLN3Q8WXF3 142 aa10.52□□□□□ -0.72
RPGR-203ENST00000378505 RAB40AQ8WXH6 277 aa10.52□□□□□ -0.72
RPGR-203ENST00000378505 BORCS8Q96FH0 119 aa10.52□□□□□ -0.72
RPGR-203ENST00000378505 TMEM121BQ9BXQ6 578 aaPredicted RBP10.52□□□□□ -0.72
RPGR-203ENST00000378505 ZDHHC5Q9C0B5 715 aa10.52□□□□□ -0.72
RPGR-203ENST00000378505 NDRG4Q9ULP0 352 aaKnown RBP10.52□□□□□ -0.72
RPGR-203ENST00000378505 SNX11Q9Y5W9 270 aa10.52□□□□□ -0.72
RPGR-203ENST00000378505 PEX11BO96011 259 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 APOC3P02656 99 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 ZNF77Q15935 545 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 AGAP7PQ5VUJ5 663 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 GARNL3Q5VVW2 1013 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 TMEM64Q6YI46 380 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 MFSD8Q8NHS3 518 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 SYNPRQ8TBG9 265 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 TCTN2Q96GX1 697 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 TSNAXQ99598 290 aaKnown RBP10.52□□□□□ -0.73
RPGR-203ENST00000378505 DUSP21Q9H596 190 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 RREB1Q92766 1687 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 METTL15A6NJ78 407 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 ZNF736B4DX44 427 aaPredicted RBP10.52□□□□□ -0.73
RPGR-203ENST00000378505 ZNF264O43296 627 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 TSPAN12O95859 305 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 MPIG6BO95866 241 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 OR2T7P0C7T2 308 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 ZNF16P17020 682 aaPredicted RBP10.52□□□□□ -0.73
RPGR-203ENST00000378505 ADH6P28332 368 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 SFTPDP35247 375 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 CAV3P56539 151 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 RPS25P62851 125 aaKnown RBP10.52□□□□□ -0.73
RPGR-203ENST00000378505 CCSAPQ6IQ19 270 aaPredicted RBP10.52□□□□□ -0.73
RPGR-203ENST00000378505 MFSD12Q6NUT3 480 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 LIMS2Q7Z4I7 341 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 LAX1Q8IWV1 398 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 TMEFF1Q8IYR6 380 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 OR2T27Q8NH04 317 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 HHIPQ96QV1 700 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 ZNF442Q9H7R0 627 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 SAGE1Q9NXZ1 904 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 ZNF281Q9Y2X9 895 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 GJE1A6NN92 205 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 CD6P30203 668 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 THBS2P35442 1172 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 PXNP49023 591 aaPredicted RBP10.52□□□□□ -0.73
RPGR-203ENST00000378505 CHRDL2Q6WN34 429 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 LRRC69Q6ZNQ3 347 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 NINJ1Q92982 152 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 TNFRSF13CQ96RJ3 184 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 RBM24Q9BX46 236 aaKnown RBP10.52□□□□□ -0.73
RPGR-203ENST00000378505 TM7SF3Q9NS93 570 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 RLIMQ9NVW2 624 aa10.52□□□□□ -0.73
RPGR-203ENST00000378505 ARPC5O15511 151 aa10.51□□□□□ -0.73
RPGR-203ENST00000378505 AKAIN1P0CW23 69 aa10.51□□□□□ -0.73
RPGR-203ENST00000378505 SLC2A5P22732 501 aa10.51□□□□□ -0.73
RPGR-203ENST00000378505 PKLRP30613 574 aa10.51□□□□□ -0.73
RPGR-203ENST00000378505 BCL6P41182 706 aa10.51□□□□□ -0.73
RPGR-203ENST00000378505 DLX5P56178 289 aa10.51□□□□□ -0.73
RPGR-203ENST00000378505 DPTQ07507 201 aa10.51□□□□□ -0.73
RPGR-203ENST00000378505 ERV3-1Q14264 604 aa10.51□□□□□ -0.73
RPGR-203ENST00000378505 GPR18Q14330 331 aa10.51□□□□□ -0.73
RPGR-203ENST00000378505 NKPD1Q17RQ9 610 aa10.51□□□□□ -0.73
RPGR-203ENST00000378505 HBMQ6B0K9 141 aa10.51□□□□□ -0.73
RPGR-203ENST00000378505 HAGHLQ6PII5 290 aaPredicted RBP10.51□□□□□ -0.73
RPGR-203ENST00000378505 TMPPEQ6ZT21 453 aa10.51□□□□□ -0.73
RPGR-203ENST00000378505 PXKQ7Z7A4 578 aa10.51□□□□□ -0.73
RPGR-203ENST00000378505 LAS2Q8IYD9 372 aa10.51□□□□□ -0.73
RPGR-203ENST00000378505 IL22RA1Q8N6P7 574 aa10.51□□□□□ -0.73
RPGR-203ENST00000378505 SLC16A11Q8NCK7 471 aa10.51□□□□□ -0.73
RPGR-203ENST00000378505 VN1R2Q8NFZ6 395 aa10.51□□□□□ -0.73
RPGR-203ENST00000378505 KATNB1Q9BVA0 655 aa10.51□□□□□ -0.73
RPGR-203ENST00000378505 IKZF5Q9H5V7 419 aa10.51□□□□□ -0.73
RPGR-203ENST00000378505 ACER3Q9NUN7 267 aa10.51□□□□□ -0.73
RPGR-203ENST00000378505 TCRBV5S2A0A599 114 aa10.51□□□□□ -0.73
RPGR-203ENST00000378505 PRKRAO75569 313 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms