RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 MAPK14Q16539 360 aa13.18□□□□□ -0.3
CLCN6-204ENST00000376491 PGS1Q32NB8 556 aa13.18□□□□□ -0.3
CLCN6-204ENST00000376491 ARHGAP11BQ3KRB8 267 aa13.18□□□□□ -0.3
CLCN6-204ENST00000376491 SYT14P1Q58G82 188 aa13.18□□□□□ -0.3
CLCN6-204ENST00000376491 ABLIM2Q6H8Q1 611 aa13.18□□□□□ -0.3
CLCN6-204ENST00000376491 GALNT5Q7Z7M9 940 aa13.18□□□□□ -0.3
CLCN6-204ENST00000376491 ZNF100Q8IYN0 542 aa13.18□□□□□ -0.3
CLCN6-204ENST00000376491 ZNF433Q8N7K0 673 aaPredicted RBP13.18□□□□□ -0.3
CLCN6-204ENST00000376491 SLC35G5Q96KT7 338 aa13.18□□□□□ -0.3
CLCN6-204ENST00000376491 ACER3Q9NUN7 267 aa13.18□□□□□ -0.3
CLCN6-204ENST00000376491 IGKV3D-15A0A087WSY6 115 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 OR5H1A6NKK0 313 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 DUXAA6NLW8 204 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 ZNF716A6NP11 495 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 SULT2B1O00204 365 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 TLX2O43763 284 aaPredicted RBP13.17□□□□□ -0.3
CLCN6-204ENST00000376491 SCN2BO60939 215 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 AK1P00568 194 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 BPGMP07738 259 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 PGM1P36871 562 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 SERPINB5P36952 375 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 CDH11P55287 796 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 PHC1P78364 1004 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 PLAURQ03405 335 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 EMX2Q04743 252 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 FUT5Q11128 374 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 TYW3Q6IPR3 259 aaKnown RBP13.17□□□□□ -0.3
CLCN6-204ENST00000376491 BHLHB9Q6PI77 547 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 MTDHQ86UE4 582 aaKnown RBP13.17□□□□□ -0.3
CLCN6-204ENST00000376491 RIBC1Q8N443 379 aaPredicted RBP13.17□□□□□ -0.3
CLCN6-204ENST00000376491 FAM71CQ8NEG0 241 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 TMEM234Q8WY98 164 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 ARL8AQ96BM9 186 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 MUCL1Q96DR8 90 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 DNAJA3Q96EY1 480 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 ARL5BQ96KC2 179 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 HS6ST2Q96MM7 605 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 CCDC106Q9BWC9 280 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 OR51I1Q9H343 314 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 ALG2Q9H553 416 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 CTPS2Q9NRF8 586 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 YAE1D1Q9NRH1 226 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 SERINC1Q9NRX5 453 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 LGALS13Q9UHV8 139 aa13.17□□□□□ -0.3
CLCN6-204ENST00000376491 IGHV4-30-2A0A087WSY4 118 aa13.16□□□□□ -0.3
CLCN6-204ENST00000376491 A0A096LNT2 108 aa13.16□□□□□ -0.3
CLCN6-204ENST00000376491 RNF103-CHMP3A0A140T963 221 aa13.16□□□□□ -0.3
CLCN6-204ENST00000376491 A0A1W2PR80 420 aa13.16□□□□□ -0.3
CLCN6-204ENST00000376491 E7EQL1 145 aa13.16□□□□□ -0.3
CLCN6-204ENST00000376491 RNASET2O00584 256 aaKnown RBP13.16□□□□□ -0.3
CLCN6-204ENST00000376491 ITM2AO43736 263 aa13.16□□□□□ -0.3
CLCN6-204ENST00000376491 SSX4O60224 188 aa13.16□□□□□ -0.3
CLCN6-204ENST00000376491 GPRIN2O60269 458 aa13.16□□□□□ -0.3
CLCN6-204ENST00000376491 RAD51DO75771 328 aa13.16□□□□□ -0.3
CLCN6-204ENST00000376491 TP53P04637 393 aaPredicted RBP13.16□□□□□ -0.3
CLCN6-204ENST00000376491 NUDT17P0C025 328 aa13.16□□□□□ -0.3
CLCN6-204ENST00000376491 OR12D1P0DN82 309 aa13.16□□□□□ -0.3
CLCN6-204ENST00000376491 PGCP20142 388 aa13.16□□□□□ -0.3
CLCN6-204ENST00000376491 ETV4P43268 484 aa13.16□□□□□ -0.3
CLCN6-204ENST00000376491 FOXG1P55316 489 aaPredicted RBP13.16□□□□□ -0.3
CLCN6-204ENST00000376491 CSNK2A1P68400 391 aaPredicted RBP13.16□□□□□ -0.3
CLCN6-204ENST00000376491 IRX1P78414 480 aaPredicted RBP13.16□□□□□ -0.3
CLCN6-204ENST00000376491 SPOCK1Q08629 439 aa13.16□□□□□ -0.3
CLCN6-204ENST00000376491 PDK3Q15120 406 aa13.16□□□□□ -0.3
CLCN6-204ENST00000376491 FBXW9Q5XUX1 488 aa13.16□□□□□ -0.3
CLCN6-204ENST00000376491 C11orf71Q6IPW1 123 aa13.16□□□□□ -0.3
CLCN6-204ENST00000376491 HMBOX1Q6NT76 420 aa13.16□□□□□ -0.3
CLCN6-204ENST00000376491 HMGN2P46Q86SG4 172 aa13.16□□□□□ -0.3
CLCN6-204ENST00000376491 P2RY8Q86VZ1 359 aa13.16□□□□□ -0.3
CLCN6-204ENST00000376491 HIPK1Q86Z02 1210 aa13.16□□□□□ -0.3
CLCN6-204ENST00000376491 OR52N5Q8NH56 324 aa13.16□□□□□ -0.3
CLCN6-204ENST00000376491 MIPOL1Q8TD10 442 aa13.16□□□□□ -0.3
CLCN6-204ENST00000376491 ZG16BQ96DA0 208 aa13.16□□□□□ -0.3
CLCN6-204ENST00000376491 ASIC5Q9NY37 505 aa13.16□□□□□ -0.3
CLCN6-204ENST00000376491 SLC25A15Q9Y619 301 aa13.16□□□□□ -0.3
CLCN6-204ENST00000376491 CUBNO60494 3623 aa13.15□□□□□ -0.3
CLCN6-204ENST00000376491 PRAMEF27A3QJZ7 478 aa13.15□□□□□ -0.3
CLCN6-204ENST00000376491 KIAA0513O60268 411 aa13.15□□□□□ -0.3
CLCN6-204ENST00000376491 C1QCP02747 245 aa13.15□□□□□ -0.3
CLCN6-204ENST00000376491 TFPIP10646 304 aa13.15□□□□□ -0.3
CLCN6-204ENST00000376491 TTKP33981 857 aa13.15□□□□□ -0.3
CLCN6-204ENST00000376491 NRF1Q16656 503 aa13.15□□□□□ -0.3
CLCN6-204ENST00000376491 AGAP6Q5VW22 663 aa13.15□□□□□ -0.3
CLCN6-204ENST00000376491 AP1ARQ63HQ0 302 aa13.15□□□□□ -0.3
CLCN6-204ENST00000376491 B3GLCTQ6Y288 498 aa13.15□□□□□ -0.3
CLCN6-204ENST00000376491 FRRS1Q6ZNA5 592 aa13.15□□□□□ -0.3
CLCN6-204ENST00000376491 EIF3MQ7L2H7 374 aaKnown RBP13.15□□□□□ -0.3
CLCN6-204ENST00000376491 SSX8Q7RTT4 187 aa13.15□□□□□ -0.3
CLCN6-204ENST00000376491 C16orf62Q7Z3J2 963 aa13.15□□□□□ -0.3
CLCN6-204ENST00000376491 ADGRG3Q86Y34 549 aa13.15□□□□□ -0.3
CLCN6-204ENST00000376491 CCDC103Q8IW40 242 aa13.15□□□□□ -0.3
CLCN6-204ENST00000376491 PIAS4Q8N2W9 510 aaPredicted RBP13.15□□□□□ -0.3
CLCN6-204ENST00000376491 OR10H5Q8NGA6 315 aa13.15□□□□□ -0.3
CLCN6-204ENST00000376491 OR8J2Q8NGG1 315 aa13.15□□□□□ -0.3
CLCN6-204ENST00000376491 OR4A15Q8NGL6 344 aa13.15□□□□□ -0.3
CLCN6-204ENST00000376491 SLC25A43Q8WUT9 341 aaPredicted RBP13.15□□□□□ -0.3
CLCN6-204ENST00000376491 XAGE5Q8WWM1 108 aa13.15□□□□□ -0.3
CLCN6-204ENST00000376491 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.15□□□□□ -0.3
CLCN6-204ENST00000376491 RAB8BQ92930 207 aa13.15□□□□□ -0.3
CLCN6-204ENST00000376491 PPP1R36Q96LQ0 422 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms