RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 RASD2Q96D21 266 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 FKBP14Q9NWM8 211 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 SSX5O60225 188 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 ANXA7P20073 488 aaKnown RBP6.1□□□□□ -1.43
SMC1A-202ENST00000375340 C5AR1P21730 350 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 TGM1P22735 817 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 LTBQ06643 244 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 GPR176Q14439 515 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 ZNF765Q7L2R6 523 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 CALHM3Q86XJ0 350 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 GKN2Q86XP6 184 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 MFSD4AQ8N468 514 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 TMIEQ8NEW7 156 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 ACOT11Q8WXI4 607 aaPredicted RBP6.1□□□□□ -1.43
SMC1A-202ENST00000375340 ELF4Q99607 663 aaPredicted RBP6.1□□□□□ -1.43
SMC1A-202ENST00000375340 COPZ2Q9P299 210 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 A0A0A6YYC8 382 aaPredicted RBP6.1□□□□□ -1.43
SMC1A-202ENST00000375340 I3L1I5 382 aaPredicted RBP6.1□□□□□ -1.43
SMC1A-202ENST00000375340 MAGEB4O15481 346 aaPredicted RBP6.1□□□□□ -1.43
SMC1A-202ENST00000375340 TNFSF12O43508 249 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 SCGNO76038 276 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 SIX6O95475 246 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 F13BP05160 661 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 SPOCK1Q08629 439 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 SGCAQ16586 387 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 TNFRSF13CQ96RJ3 184 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 BTBD2Q9BX70 525 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 KLHL42Q9P2K6 505 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 ERVK-19Q9WJR5 959 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 TNS1Q9HBL0 1735 aaKnown RBP6.1□□□□□ -1.43
SMC1A-202ENST00000375340 DCNP07585 359 aaKnown RBP6.1□□□□□ -1.43
SMC1A-202ENST00000375340 AKAIN1P0CW23 69 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 ARRB1P49407 418 aaPredicted RBP6.1□□□□□ -1.43
SMC1A-202ENST00000375340 OC90Q02509 493 aaPredicted RBP6.1□□□□□ -1.43
SMC1A-202ENST00000375340 FAM78AQ5JUQ0 283 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 DNM1P34Q6PK57 102 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 ZNF683Q8IZ20 524 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 GHSRQ92847 366 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 NRTNQ99748 197 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 ATG4BQ9Y4P1 393 aa6.1□□□□□ -1.43
SMC1A-202ENST00000375340 TNFRSF10AO00220 468 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 ZNF208O43345 1280 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 SLC22A5O76082 557 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 AHSA1O95433 338 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 HTR1FP30939 366 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 GDNFP39905 211 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 CBX5P45973 191 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 BLKP51451 505 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 SELENBP1Q13228 472 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 C8orf82Q6P1X6 216 aaPredicted RBP6.09□□□□□ -1.43
SMC1A-202ENST00000375340 NKAIN4Q8IVV8 208 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 SEC22CQ9BRL7 303 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 SYT4Q9H2B2 425 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 POFUT1Q9H488 388 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 IL23AQ9NPF7 189 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 PAPPA2Q9BXP8 1791 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 ZAR1LA6NP61 321 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 ZSWIM8A7E2V4 1837 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 PEX12O00623 359 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 NDUFB2O95178 105 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 KCNJ5P48544 419 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 ERVFC1P60507 584 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 TNFRSF17Q02223 184 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 DBPQ10586 325 aaPredicted RBP6.09□□□□□ -1.43
SMC1A-202ENST00000375340 CDC20Q12834 499 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 FAPQ12884 760 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 CD163Q86VB7 1156 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 OR5T3Q8NGG3 340 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 GAL3ST3Q96A11 431 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 ATF6BQ99941 703 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 ZFYVE21Q9BQ24 234 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 SFXN1Q9H9B4 322 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 C17orf105B2RV13 164 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 SC5DO75845 299 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 ABLIM3O94929 683 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 NTN1O95631 604 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 FOXK2Q01167 660 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 FAM111BQ6SJ93 734 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 C12orf40Q86WS4 652 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 PAQR8Q8TEZ7 354 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 GFYI3L273 518 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 PPM1BO75688 479 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 TIMP1P01033 207 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 METAP1P53582 386 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 DGCR2P98153 550 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 ZNF322Q6U7Q0 402 aaPredicted RBP6.09□□□□□ -1.43
SMC1A-202ENST00000375340 C3P1Q6ZMU1 363 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 LIMS2Q7Z4I7 341 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 UCN3Q969E3 161 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 ELP4Q96EB1 424 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 RAD9AQ99638 391 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 DOK1Q99704 481 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 ATP13A2Q9NQ11 1180 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 CLEC3AO75596 197 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 OR8G3PP0DMU2 310 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 ZNF16P17020 682 aaPredicted RBP6.09□□□□□ -1.43
SMC1A-202ENST00000375340 M6PRP20645 277 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 VAMP2P63027 116 aa6.09□□□□□ -1.43
SMC1A-202ENST00000375340 RUNX3Q13761 415 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms