RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 REM1O75628 298 aa16.49■□□□□ 0.23
HLA-DQB1-201ENST00000374943 IGHA1P01876 353 aa16.49■□□□□ 0.23
HLA-DQB1-201ENST00000374943 CYC1P08574 325 aa16.49■□□□□ 0.23
HLA-DQB1-201ENST00000374943 SLC6A6P31641 620 aa16.49■□□□□ 0.23
HLA-DQB1-201ENST00000374943 SLC6A8P48029 635 aa16.49■□□□□ 0.23
HLA-DQB1-201ENST00000374943 NR0B1P51843 470 aaKnown RBP16.49■□□□□ 0.23
HLA-DQB1-201ENST00000374943 FOXK2Q01167 660 aa16.49■□□□□ 0.23
HLA-DQB1-201ENST00000374943 PLCXD2Q0VAA5 305 aa16.49■□□□□ 0.23
HLA-DQB1-201ENST00000374943 TMED1Q13445 227 aa16.49■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ARMC4Q5T2S8 1044 aa16.49■□□□□ 0.23
HLA-DQB1-201ENST00000374943 NIPAL3Q6P499 406 aa16.49■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ATG4DQ86TL0 474 aaPredicted RBP16.49■□□□□ 0.23
HLA-DQB1-201ENST00000374943 CROCCP3Q8IVE0 287 aa16.49■□□□□ 0.23
HLA-DQB1-201ENST00000374943 CPOQ8IVL8 374 aa16.49■□□□□ 0.23
HLA-DQB1-201ENST00000374943 TP53INP1Q96A56 240 aa16.49■□□□□ 0.23
HLA-DQB1-201ENST00000374943 IFT27Q9BW83 186 aa16.49■□□□□ 0.23
HLA-DQB1-201ENST00000374943 OR51E2Q9H255 320 aa16.49■□□□□ 0.23
HLA-DQB1-201ENST00000374943 SLC26A1Q9H2B4 701 aa16.49■□□□□ 0.23
HLA-DQB1-201ENST00000374943 C12orf10Q9HB07 376 aa16.49■□□□□ 0.23
HLA-DQB1-201ENST00000374943 CHCHD3Q9NX63 227 aaKnown RBP16.49■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ALG1L2C9J202 215 aa16.48■□□□□ 0.23
HLA-DQB1-201ENST00000374943 GTPBP1O00178 669 aaKnown RBP16.48■□□□□ 0.23
HLA-DQB1-201ENST00000374943 NADKO95544 446 aaPredicted RBP16.48■□□□□ 0.23
HLA-DQB1-201ENST00000374943 HEXBP07686 556 aa16.48■□□□□ 0.23
HLA-DQB1-201ENST00000374943 WNT4P56705 351 aa16.48■□□□□ 0.23
HLA-DQB1-201ENST00000374943 IL11RAQ14626 422 aa16.48■□□□□ 0.23
HLA-DQB1-201ENST00000374943 PAQR6Q6TCH4 344 aa16.48■□□□□ 0.23
HLA-DQB1-201ENST00000374943 GDPGP1Q6ZNW5 385 aa16.48■□□□□ 0.23
HLA-DQB1-201ENST00000374943 PRR22Q8IZ63 422 aa16.48■□□□□ 0.23
HLA-DQB1-201ENST00000374943 GATSQ8NAP1 163 aa16.48■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ZBTB44Q8NCP5 570 aa16.48■□□□□ 0.23
HLA-DQB1-201ENST00000374943 NFAM1Q8NET5 270 aaPredicted RBP16.48■□□□□ 0.23
HLA-DQB1-201ENST00000374943 BBS1Q8NFJ9 593 aa16.48■□□□□ 0.23
HLA-DQB1-201ENST00000374943 BORCS5Q969J3 196 aa16.48■□□□□ 0.23
HLA-DQB1-201ENST00000374943 OMA1Q96E52 524 aa16.48■□□□□ 0.23
HLA-DQB1-201ENST00000374943 DTNBP1Q96EV8 351 aa16.48■□□□□ 0.23
HLA-DQB1-201ENST00000374943 LRFN5Q96NI6 719 aa16.48■□□□□ 0.23
HLA-DQB1-201ENST00000374943 TMEM43Q9BTV4 400 aa16.48■□□□□ 0.23
HLA-DQB1-201ENST00000374943 NRSN2Q9GZP1 204 aa16.48■□□□□ 0.23
HLA-DQB1-201ENST00000374943 SLIRPQ9GZT3 109 aaKnown RBP16.48■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ZBTB20Q9HC78 741 aaPredicted RBP16.48■□□□□ 0.23
HLA-DQB1-201ENST00000374943 NDUFB11Q9NX14 153 aa16.48■□□□□ 0.23
HLA-DQB1-201ENST00000374943 H2AFY2Q9P0M6 372 aaPredicted RBP16.48■□□□□ 0.23
HLA-DQB1-201ENST00000374943 PMF1-BGLAPU3KQ54 211 aa16.48■□□□□ 0.23
HLA-DQB1-201ENST00000374943 EIF4E2O60573 245 aaKnown RBP16.47■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ALOX12BO75342 701 aa16.47■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ABCD3P28288 659 aa16.47■□□□□ 0.23
HLA-DQB1-201ENST00000374943 TGFBR1P36897 503 aa16.47■□□□□ 0.23
HLA-DQB1-201ENST00000374943 PHF19Q5T6S3 580 aa16.47■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ARHGAP11AQ6P4F7 1023 aa16.47■□□□□ 0.23
HLA-DQB1-201ENST00000374943 CBLN3Q6UW01 205 aa16.47■□□□□ 0.23
HLA-DQB1-201ENST00000374943 SHISA6Q6ZSJ9 500 aa16.47■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ADCK1Q86TW2 530 aa16.47■□□□□ 0.23
HLA-DQB1-201ENST00000374943 OR51A7Q8NH64 312 aa16.47■□□□□ 0.23
HLA-DQB1-201ENST00000374943 TNFRSF13CQ96RJ3 184 aa16.47■□□□□ 0.23
HLA-DQB1-201ENST00000374943 PHOX2BQ99453 314 aa16.47■□□□□ 0.23
HLA-DQB1-201ENST00000374943 CARD8Q9Y2G2 431 aa16.47■□□□□ 0.23
HLA-DQB1-201ENST00000374943 PIEZO1Q92508 2521 aa16.47■□□□□ 0.23
HLA-DQB1-201ENST00000374943 IGKV1D-42A0A075B6H8 117 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 J3QRE1 110 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 NDUFB2O95178 105 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 LIMS3P0CW19 117 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 LIMS4P0CW20 117 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 PEPDP12955 493 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 BMXP51813 675 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 RNF4P78317 190 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 PLBD1Q6P4A8 553 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 MEPCEQ7L2J0 689 aaKnown RBP16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 LSRQ86X29 649 aaPredicted RBP16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ZNF485Q8NCK3 441 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 PSD4Q8NDX1 1056 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 LIPHQ8WWY8 451 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 SH3GL3Q99963 347 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 CHCHD6Q9BRQ6 235 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 PALMDQ9NP74 551 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 FBXO8Q9NRD0 319 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 OCIAD1Q9NX40 245 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 CCDC59Q9P031 241 aaKnown RBP16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 SEC14L4Q9UDX3 406 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 A3GALT2U3KPV4 340 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 PCNX3Q9H6A9 2034 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 LOC100506127A0A0U1RQW1 187 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 CDC14CA4D256 554 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 OR6C70A6NIJ9 312 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ELOA3DA6NLF2 546 aaPredicted RBP16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 RIIAD1A6NNX1 92 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 SOCS6O14544 535 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 OR7A10O76100 309 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ZNF883P0CG24 379 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 CPEP16870 476 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 HK1P19367 917 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 MST1P26927 711 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 SOX3P41225 446 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 SLC1A3P43003 542 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 RPS4XP62701 263 aaKnown RBP16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ZNF117Q03924 483 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ZFP36L1Q07352 338 aaKnown RBP16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ELOA3BQ3SY89 546 aa16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 ZNF362Q5T0B9 420 aaPredicted RBP16.46■□□□□ 0.23
HLA-DQB1-201ENST00000374943 FAAH2Q6GMR7 532 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms