RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 TPSD1Q9BZJ3 242 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 PLA2G12AQ9BZM1 189 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 C6orf62Q9GZU0 229 aaPredicted RBP8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 ANKRA2Q9H9E1 313 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 TBC1D17Q9HA65 648 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 LANCL2Q9NS86 450 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 TXNL4BQ9NX01 149 aaKnown RBP8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 AASSQ9UDR5 926 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 C19orf25Q9UFG5 118 aaPredicted RBP8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 DAPK2Q9UIK4 370 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 KCNE5Q9UJ90 142 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 ZNF229Q9UJW7 825 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 NXT1Q9UKK6 140 aaKnown RBP8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 ERVK-19Q9WJR5 959 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 HIF3AQ9Y2N7 669 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 CLDN16Q9Y5I7 305 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 NPFFR2Q9Y5X5 522 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 SPIN1Q9Y657 262 aaPredicted RBP8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 TMEM14AQ9Y6G1 99 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 RNF215Q9Y6U7 377 aa8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 MKI67P46013 3256 aaKnown RBP8.02□□□□□ -1.13
SNRNP40-202ENST00000373720 A0A1W2PS29 197 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 DAPL1A0PJW8 107 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 OR6C70A6NIJ9 312 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 NPIPB13A6NJU9 1138 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 ELOA3DA6NLF2 546 aaPredicted RBP8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 ALG1L2C9J202 215 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 NPIPB4C9JG80 1138 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 K7ESF4 209 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 GTPBP1O00178 669 aaKnown RBP8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 CDC42EP2O14613 210 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 GPX5O75715 221 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 SBK2P0C263 348 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 BMP4P12644 408 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 TGM1P22735 817 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 MSX1P28360 303 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 IDUAP35475 653 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 ETV5P41161 510 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 GPR4P46093 362 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 TMED10P49755 219 aaKnown RBP8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 ETV1P50549 477 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 BCAP31P51572 246 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 PSMD7P51665 324 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 DLX5P56178 289 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 LSM3P62310 102 aaKnown RBP8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 SCN1BQ07699 218 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 IL11RAQ14626 422 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 NR0B2Q15466 257 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 ELOA3BQ3SY89 546 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 SNAP47Q5SQN1 464 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 CCNJQ5T5M9 372 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 FNDC7Q5VTL7 733 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 AGAP7PQ5VUJ5 663 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 PEAR1Q5VY43 1037 aaPredicted RBP8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 LYSMD4Q5XG99 296 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 BAIAP2L2Q6UXY1 529 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 CPOQ8IVL8 374 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 SIX5Q8N196 739 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 IQCF1Q8N6M8 205 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 SLC37A3Q8NCC5 494 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 SIMC1Q8NDZ2 872 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 ELOA3Q8NG57 546 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 OR4Q3Q8NH05 313 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 NUBPLQ8TB37 319 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 PTPMT1Q8WUK0 201 aaPredicted RBP8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 RLN3Q8WXF3 142 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 TMEM234Q8WY98 164 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 CNOT9Q92600 299 aaKnown RBP8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 TTC9Q92623 222 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 OTULINQ96BN8 352 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 ARSGQ96EG1 525 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 CNPPD1Q9BV87 410 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 SEMA4CQ9C0C4 833 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 ADAM19Q9H013 955 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 KLHL25Q9H0H3 589 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 MIR1-1HGQ9H1L0 117 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 SLC26A1Q9H2B4 701 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 FKRPQ9H9S5 495 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 EXOSC4Q9NPD3 245 aaKnown RBP8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 NRIP3Q9NQ35 241 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 HCN3Q9P1Z3 774 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 SF3B6Q9Y3B4 125 aaKnown RBP8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 GRIP1Q9Y3R0 1128 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 PCDHGB2Q9Y5G2 931 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 PMF1-BGLAPU3KQ54 211 aa8.01□□□□□ -1.13
SNRNP40-202ENST00000373720 ARHGEF17Q96PE2 2063 aaPredicted RBP8□□□□□ -1.13
SNRNP40-202ENST00000373720 TRAV1-2A0A0B4J238 106 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 FUOMA2VDF0 154 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 FRS3O43559 492 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 HCRTR1O43613 425 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 ITGA10O75578 1167 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 OR7A10O76100 309 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 ZNF432O94892 652 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 HIST1H2ABP04908 130 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 ZGLP1P0C6A0 271 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 FUT1P19526 365 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 MAKP20794 623 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 SLC2A5P22732 501 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 IL12BP29460 328 aa8□□□□□ -1.13
SNRNP40-202ENST00000373720 RPS19P39019 145 aaKnown RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms