RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 C4orf47A7E2U8 309 aa21.93■■□□□ 1.1
CDK9-201ENST00000373264 SBK2P0C263 348 aa21.93■■□□□ 1.1
CDK9-201ENST00000373264 RAB30Q15771 203 aa21.93■■□□□ 1.1
CDK9-201ENST00000373264 TBRG1Q3YBR2 411 aa21.93■■□□□ 1.1
CDK9-201ENST00000373264 SYT9Q86SS6 491 aa21.93■■□□□ 1.1
CDK9-201ENST00000373264 SMRP1Q8NCR6 262 aa21.93■■□□□ 1.1
CDK9-201ENST00000373264 OR5M3Q8NGP4 307 aa21.93■■□□□ 1.1
CDK9-201ENST00000373264 SMPDL3BQ92485 455 aa21.93■■□□□ 1.1
CDK9-201ENST00000373264 RBM18Q96H35 190 aaKnown RBP21.93■■□□□ 1.1
CDK9-201ENST00000373264 CTRCQ99895 268 aa21.93■■□□□ 1.1
CDK9-201ENST00000373264 MPDZO75970 2070 aa21.93■■□□□ 1.1
CDK9-201ENST00000373264 A6NL46 340 aa21.92■■□□□ 1.1
CDK9-201ENST00000373264 C10orf142B7Z368 130 aa21.92■■□□□ 1.1
CDK9-201ENST00000373264 FAAH2Q6GMR7 532 aa21.92■■□□□ 1.1
CDK9-201ENST00000373264 TMEM53Q6P2H8 277 aa21.92■■□□□ 1.1
CDK9-201ENST00000373264 GALNT6Q8NCL4 622 aa21.92■■□□□ 1.1
CDK9-201ENST00000373264 OR52E2Q8NGJ4 325 aa21.92■■□□□ 1.1
CDK9-201ENST00000373264 SLC35A3Q9Y2D2 325 aa21.92■■□□□ 1.1
CDK9-201ENST00000373264 SEC16AO15027 2179 aa21.92■■□□□ 1.1
CDK9-201ENST00000373264 RIIAD1A6NNX1 92 aa21.92■■□□□ 1.1
CDK9-201ENST00000373264 MAOBP27338 520 aa21.92■■□□□ 1.1
CDK9-201ENST00000373264 HOXD12P35452 270 aa21.92■■□□□ 1.1
CDK9-201ENST00000373264 PPM1FP49593 454 aaPredicted RBP21.92■■□□□ 1.1
CDK9-201ENST00000373264 MANEAQ5SRI9 462 aa21.92■■□□□ 1.1
CDK9-201ENST00000373264 LYPD4Q6UWN0 246 aa21.92■■□□□ 1.1
CDK9-201ENST00000373264 HOXB13Q92826 284 aaPredicted RBP21.92■■□□□ 1.1
CDK9-201ENST00000373264 ERMAPQ96PL5 475 aaPredicted RBP21.92■■□□□ 1.1
CDK9-201ENST00000373264 DDX28Q9NUL7 540 aaKnown RBP21.92■■□□□ 1.1
CDK9-201ENST00000373264 ERVK-19Q9WJR5 959 aa21.92■■□□□ 1.1
CDK9-201ENST00000373264 ALPK2Q86TB3 2170 aa21.92■■□□□ 1.1
CDK9-201ENST00000373264 A0A0G2JMP0 313 aa21.91■■□□□ 1.1
CDK9-201ENST00000373264 A0A0X1KG70 313 aa21.91■■□□□ 1.1
CDK9-201ENST00000373264 MCIDASD6RGH6 385 aa21.91■■□□□ 1.1
CDK9-201ENST00000373264 HCN1O60741 890 aa21.91■■□□□ 1.1
CDK9-201ENST00000373264 PAHP00439 452 aa21.91■■□□□ 1.1
CDK9-201ENST00000373264 KRT8P05787 483 aa21.91■■□□□ 1.1
CDK9-201ENST00000373264 HIST1H1CP16403 213 aaKnown RBP21.91■■□□□ 1.1
CDK9-201ENST00000373264 OR4M2Q8NGB6 313 aa21.91■■□□□ 1.1
CDK9-201ENST00000373264 ZPLD1Q8TCW7 415 aa21.91■■□□□ 1.1
CDK9-201ENST00000373264 FYTTD1Q96QD9 318 aaKnown RBP21.91■■□□□ 1.1
CDK9-201ENST00000373264 ZNF426Q9BUY5 554 aa21.91■■□□□ 1.1
CDK9-201ENST00000373264 POLHQ9Y253 713 aa21.91■■□□□ 1.1
CDK9-201ENST00000373264 CFAP54Q96N23 3096 aa21.91■■□□□ 1.1
CDK9-201ENST00000373264 THADAQ6YHU6 1953 aa21.91■■□□□ 1.1
CDK9-201ENST00000373264 FAM221BA6H8Z2 402 aa21.91■■□□□ 1.1
CDK9-201ENST00000373264 FAM25AB3EWG3 89 aa21.91■■□□□ 1.1
CDK9-201ENST00000373264 FAM25CB3EWG5 89 aa21.91■■□□□ 1.1
CDK9-201ENST00000373264 FAM25GB3EWG6 89 aa21.91■■□□□ 1.1
CDK9-201ENST00000373264 SEC14L5O43304 696 aa21.91■■□□□ 1.1
CDK9-201ENST00000373264 AK1P00568 194 aa21.91■■□□□ 1.1
CDK9-201ENST00000373264 TFP02787 698 aa21.91■■□□□ 1.1
CDK9-201ENST00000373264 CT45A8P0DMV1 189 aa21.91■■□□□ 1.1
CDK9-201ENST00000373264 CT45A9P0DMV2 189 aa21.91■■□□□ 1.1
CDK9-201ENST00000373264 NAA10P41227 235 aaPredicted RBP21.91■■□□□ 1.1
CDK9-201ENST00000373264 TP53I3Q53FA7 332 aa21.91■■□□□ 1.1
CDK9-201ENST00000373264 CT45A2Q5DJT8 189 aa21.91■■□□□ 1.1
CDK9-201ENST00000373264 PAMR1Q6UXH9 720 aa21.91■■□□□ 1.1
CDK9-201ENST00000373264 UBASH3BQ8TF42 649 aa21.91■■□□□ 1.1
CDK9-201ENST00000373264 ORAI3Q9BRQ5 295 aa21.91■■□□□ 1.1
CDK9-201ENST00000373264 LMF2Q9BU23 707 aaKnown RBP21.91■■□□□ 1.1
CDK9-201ENST00000373264 PYCR1P32322 319 aa21.9■■□□□ 1.1
CDK9-201ENST00000373264 PRTGQ2VWP7 1150 aa21.9■■□□□ 1.1
CDK9-201ENST00000373264 RDH10Q8IZV5 341 aa21.9■■□□□ 1.1
CDK9-201ENST00000373264 C16orf52Q8NHV5 167 aa21.9■■□□□ 1.1
CDK9-201ENST00000373264 DEPDC7Q96QD5 511 aa21.9■■□□□ 1.1
CDK9-201ENST00000373264 TTYH2Q9BSA4 534 aa21.9■■□□□ 1.1
CDK9-201ENST00000373264 ERVMER34-1Q9H9K5 563 aa21.9■■□□□ 1.1
CDK9-201ENST00000373264 TRIM36Q9NQ86 728 aa21.9■■□□□ 1.1
CDK9-201ENST00000373264 WSB2Q9NYS7 404 aaPredicted RBP21.9■■□□□ 1.1
CDK9-201ENST00000373264 TMEM5Q9Y2B1 443 aa21.9■■□□□ 1.1
CDK9-201ENST00000373264 SLC22A31A6NKX4 558 aa21.9■■□□□ 1.1
CDK9-201ENST00000373264 LANCL1O43813 399 aa21.9■■□□□ 1.1
CDK9-201ENST00000373264 MYL9P24844 172 aa21.9■■□□□ 1.1
CDK9-201ENST00000373264 SCAIQ8N9R8 606 aa21.9■■□□□ 1.1
CDK9-201ENST00000373264 CLIP3Q96DZ5 547 aa21.9■■□□□ 1.1
CDK9-201ENST00000373264 KLHDC3Q9BQ90 382 aa21.9■■□□□ 1.1
CDK9-201ENST00000373264 C8orf33Q9H7E9 229 aaPredicted RBP21.9■■□□□ 1.1
CDK9-201ENST00000373264 RANGRFQ9HD47 186 aaPredicted RBP21.9■■□□□ 1.1
CDK9-201ENST00000373264 IER3IP1Q9Y5U9 82 aa21.9■■□□□ 1.1
CDK9-201ENST00000373264 MAU2Q9Y6X3 613 aa21.9■■□□□ 1.1
CDK9-201ENST00000373264 A0A1W2PRG6 482 aa21.89■■□□□ 1.1
CDK9-201ENST00000373264 COQ9O75208 318 aa21.89■■□□□ 1.1
CDK9-201ENST00000373264 TFPIP10646 304 aa21.89■■□□□ 1.1
CDK9-201ENST00000373264 PSKH1P11801 424 aa21.89■■□□□ 1.1
CDK9-201ENST00000373264 GFERP55789 205 aa21.89■■□□□ 1.1
CDK9-201ENST00000373264 ZNHIT3Q15649 155 aaPredicted RBP21.89■■□□□ 1.1
CDK9-201ENST00000373264 SLC25A35Q3KQZ1 300 aa21.89■■□□□ 1.1
CDK9-201ENST00000373264 LCN1P1Q5VSP4 162 aa21.89■■□□□ 1.1
CDK9-201ENST00000373264 TRIQKQ629K1 86 aa21.89■■□□□ 1.1
CDK9-201ENST00000373264 CEACAM19Q7Z692 300 aa21.89■■□□□ 1.1
CDK9-201ENST00000373264 ZNF321PQ8N8H1 164 aa21.89■■□□□ 1.1
CDK9-201ENST00000373264 C7orf57Q8NEG2 295 aa21.89■■□□□ 1.1
CDK9-201ENST00000373264 SLC35B4Q969S0 331 aa21.89■■□□□ 1.1
CDK9-201ENST00000373264 EFHD2Q96C19 240 aaPredicted RBP21.89■■□□□ 1.1
CDK9-201ENST00000373264 A0A0B4J203 849 aa21.89■■□□□ 1.09
CDK9-201ENST00000373264 TTC36A6NLP5 189 aa21.89■■□□□ 1.09
CDK9-201ENST00000373264 OR5K4A6NMS3 321 aa21.89■■□□□ 1.09
CDK9-201ENST00000373264 SERPINI2O75830 405 aa21.89■■□□□ 1.09
CDK9-201ENST00000373264 EIF4EP06730 217 aaKnown RBP21.89■■□□□ 1.09
CDK9-201ENST00000373264 PEPDP12955 493 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms