RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 AIMP2Q13155 320 aaKnown RBP9.77□□□□□ -0.85
NUP188-201ENST00000372577 CCSMST1Q4G0I0 132 aa9.77□□□□□ -0.85
NUP188-201ENST00000372577 RNF165Q6ZSG1 346 aa9.77□□□□□ -0.85
NUP188-201ENST00000372577 LMNTD1Q8N9Z9 388 aa9.77□□□□□ -0.85
NUP188-201ENST00000372577 C16orf58Q96GQ5 468 aa9.77□□□□□ -0.85
NUP188-201ENST00000372577 ZNF582Q96NG8 517 aaPredicted RBP9.77□□□□□ -0.85
NUP188-201ENST00000372577 NECAB3Q96P71 396 aaPredicted RBP9.77□□□□□ -0.85
NUP188-201ENST00000372577 THAP7Q9BT49 309 aaPredicted RBP9.77□□□□□ -0.85
NUP188-201ENST00000372577 TREM1Q9NP99 234 aa9.77□□□□□ -0.85
NUP188-201ENST00000372577 WASH6PQ9NQA3 447 aa9.77□□□□□ -0.85
NUP188-201ENST00000372577 SEC14L5O43304 696 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 AMY2AP04746 511 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 THBS1P07996 1170 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 EN2P19622 333 aaPredicted RBP9.76□□□□□ -0.85
NUP188-201ENST00000372577 SLC1A3P43003 542 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 HNRNPFP52597 415 aaKnown RBP9.76□□□□□ -0.85
NUP188-201ENST00000372577 UBE2NP61088 152 aaKnown RBP9.76□□□□□ -0.85
NUP188-201ENST00000372577 C18orf63Q68DL7 685 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 SSX6Q7RTT6 188 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 FAM217AQ8IXS0 508 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 SLC2A12Q8TD20 617 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 BRIX1Q8TDN6 353 aaKnown RBP9.76□□□□□ -0.85
NUP188-201ENST00000372577 AMBRA1Q9C0C7 1298 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 ZNF160Q9HCG1 818 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 ENY2Q9NPA8 101 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 MMP17Q9ULZ9 603 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 TRBV11-1A0A0K0K1C0 115 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 A6NCN8 305 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 GGT3PA6NGU5 568 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 M0R129 80 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 GABRPO00591 440 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 PBX2P40425 430 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 CAMK2DQ13557 499 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 CDK10Q15131 360 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 SLC35D3Q5M8T2 416 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 DPY19L2P2Q6ZN68 376 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 AGBL5Q8NDL9 886 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 OR52N1Q8NH53 320 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 WBP2Q969T9 261 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 MS4A6EQ96DS6 147 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 OR10A2Q9H208 303 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 SLA2Q9H6Q3 261 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 EGLN3Q9H6Z9 239 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 SIDT1Q9NXL6 827 aaKnown RBP9.76□□□□□ -0.85
NUP188-201ENST00000372577 KCNN3Q9UGI6 736 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 POLHQ9Y253 713 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 A0A1B0GTW7 788 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 SC5DO75845 299 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 AKAIN1P0CW23 69 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 TEAD1P28347 426 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 CD34P28906 385 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 FOXK1P85037 733 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 GALNT6Q8NCL4 622 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 RHBDD1Q8TEB9 315 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 GIMAP5Q96F15 307 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 LRFN5Q96NI6 719 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 AK6Q9Y3D8 172 aaKnown RBP9.76□□□□□ -0.85
NUP188-201ENST00000372577 HEMK1Q9Y5R4 338 aaPredicted RBP9.76□□□□□ -0.85
NUP188-201ENST00000372577 QSER1Q2KHR3 1735 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 TRAV36DV7A0A075B6V5 113 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 ARRDC5A6NEK1 342 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 OR5K3A6NET4 321 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 ZNF850A8MQ14 1090 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 SBK3P0C264 359 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 MTNR1BP49286 362 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 PRKXP51817 358 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 PCBD1P61457 104 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 GPLD1P80108 840 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 DEFA5Q01523 94 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 C3orf33Q6P1S2 294 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 FOXRED2Q8IWF2 684 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 LILRA3Q8N6C8 439 aaPredicted RBP9.76□□□□□ -0.85
NUP188-201ENST00000372577 CCDC71LQ8N9Z2 235 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 MFSD8Q8NHS3 518 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 CHPT1Q8WUD6 406 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 ZNF576Q9H609 170 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 MCTS1Q9ULC4 181 aaKnown RBP9.76□□□□□ -0.85
NUP188-201ENST00000372577 CA5BQ9Y2D0 317 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 PPIL1Q9Y3C6 166 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 ATG4BQ9Y4P1 393 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 CORINQ9Y5Q5 1042 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 KRBA1A5PL33 1030 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 TNFSF8P32971 234 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 CNN3Q15417 329 aaKnown RBP9.76□□□□□ -0.85
NUP188-201ENST00000372577 SMN1Q16637 294 aaKnown RBP9.76□□□□□ -0.85
NUP188-201ENST00000372577 PCGF3Q3KNV8 242 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 GAB3Q8WWW8 586 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 CDC6Q99741 560 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 CHRDQ9H2X0 955 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 ZNF442Q9H7R0 627 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 PAQR5Q9NXK6 330 aaPredicted RBP9.76□□□□□ -0.85
NUP188-201ENST00000372577 EMC3Q9P0I2 261 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 GMPR2Q9P2T1 348 aaKnown RBP9.76□□□□□ -0.85
NUP188-201ENST00000372577 MLXQ9UH92 298 aa9.76□□□□□ -0.85
NUP188-201ENST00000372577 TMEM212A6NML5 194 aa9.75□□□□□ -0.85
NUP188-201ENST00000372577 A8MV72 311 aaPredicted RBP9.75□□□□□ -0.85
NUP188-201ENST00000372577 H3BML4 177 aa9.75□□□□□ -0.85
NUP188-201ENST00000372577 ARHGAP33O14559 1287 aa9.75□□□□□ -0.85
NUP188-201ENST00000372577 VNN2O95498 520 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms