RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 CTBP2P56545 445 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 LSM11P83369 360 aaKnown RBP eCLIP12.96□□□□□ -0.33
LDB3-204ENST00000372066 HOXC5Q00444 222 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 PSG6Q00889 435 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 ZNF45Q02386 682 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 ITGADQ13349 1161 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 GRM7Q14831 915 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 ZNF141Q15928 474 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 TMEM164Q5U3C3 297 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 AADACL4Q5VUY2 407 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 TMPRSS11FQ6ZWK6 438 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 ZNF550Q7Z398 422 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 SLITRK4Q8IW52 837 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 CENPSQ8N2Z9 138 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 RNFT2Q96EX2 444 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 VSTM2LQ96N03 204 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 CENPOQ9BU64 300 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 ALOXE3Q9BYJ1 711 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 TRIM2Q9C040 744 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 Q9N2J8 555 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 CRNNQ9UBG3 495 aaPredicted RBP12.96□□□□□ -0.33
LDB3-204ENST00000372066 KLHL3Q9UH77 587 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 KCNE5Q9UJ90 142 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 BAIAP2Q9UQB8 552 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 MED31Q9Y3C7 131 aa12.96□□□□□ -0.33
LDB3-204ENST00000372066 PIEZO2Q9H5I5 2752 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 AHCTF1Q8WYP5 2266 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 CENPVL1A0A0U1RR11 272 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 GXYLT2A0PJZ3 443 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 ISPDA4D126 451 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 C9orf172C9J069 976 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 PEX12O00623 359 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 DSCR3O14972 297 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 PIP5K1CO60331 668 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 HBQ1P09105 142 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 BMP7P18075 431 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 HTR1FP30939 366 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 GCGRP47871 477 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 EMDP50402 254 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 DSG2Q14126 1118 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 FIGNL1Q6PIW4 674 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 PSD4Q8NDX1 1056 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 OR4Q3Q8NH05 313 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 FANK1Q8TC84 345 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 MVB12AQ96EY5 273 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 PEX11GQ96HA9 241 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 CDADC1Q9BWV3 514 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 MROQ9BYG7 248 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 SOHLH2Q9NX45 425 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 HCN3Q9P1Z3 774 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 PRODH2Q9UF12 536 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 CLEC2DQ9UHP7 191 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 SSR3Q9UNL2 185 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 EXOGQ9Y2C4 368 aaKnown RBP12.95□□□□□ -0.34
LDB3-204ENST00000372066 NTNG1Q9Y2I2 539 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 MMACHCQ9Y4U1 282 aa12.95□□□□□ -0.34
LDB3-204ENST00000372066 ZNF670-ZNF695F2Z2N8 137 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 FAM87AP0C7U9 286 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 SFTPCP11686 197 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 CCL4P13236 92 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 CD82P27701 267 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 TGFBR1P36897 503 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 ETV6P41212 452 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 FUT7Q11130 342 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 FGFBP1Q14512 234 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 TBR1Q16650 682 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 SLC30A6Q6NXT4 461 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 DTX1Q86Y01 620 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 PHC2Q8IXK0 858 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 ZNF440Q8IYI8 595 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 LSMEM1Q8N8F7 131 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 GALNT6Q8NCL4 622 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 RCBTB1Q8NDN9 531 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 OR7G1Q8NGA0 311 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 COQ7Q99807 217 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 NUDT22Q9BRQ3 303 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 OR52D1Q9H346 318 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 SIDT1Q9NXL6 827 aaKnown RBP12.94□□□□□ -0.34
LDB3-204ENST00000372066 H2AFY2Q9P0M6 372 aaPredicted RBP12.94□□□□□ -0.34
LDB3-204ENST00000372066 TENM4Q6N022 2769 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 hCG_2014768A0A024R1R8 64 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 A0A0B4J2E0 115 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 A0A1B0GX12 115 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 HTR3EA5X5Y0 456 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 NPIPB9F8W1W9 429 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 HCN1O60741 890 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 GPX5O75715 221 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 MED26O95402 600 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 IGHA1P01876 353 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 IFI30P13284 250 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 PRG2P13727 222 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 WT1P19544 449 aaPredicted RBP12.94□□□□□ -0.34
LDB3-204ENST00000372066 GPR3P46089 330 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 ETV1P50549 477 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 ATP12AP54707 1039 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 ACSM1Q08AH1 577 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 TPBGQ13641 420 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.94□□□□□ -0.34
LDB3-204ENST00000372066 ZNF181Q2M3W8 571 aa12.94□□□□□ -0.34
LDB3-204ENST00000372066 TRIM16LQ309B1 348 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms