RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 TPD52P55327 224 aaPredicted RBP12.54□□□□□ -0.4
TPM3-211ENST00000368531 CLDN20P56880 219 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 OR1Q1Q15612 314 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 GXYLT1Q4G148 440 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 SLC25A53Q5H9E4 307 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 ENTPD8Q5MY95 495 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 C3P1Q6ZMU1 363 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 LILRA2Q8N149 483 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 GALNT11Q8NCW6 608 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 FAM57AQ8TBR7 257 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 SLC35B4Q969S0 331 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 WDYHV1Q96HA8 205 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 TRIM2Q9C040 744 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 MUC13Q9H3R2 512 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 SERINC1Q9NRX5 453 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 TESQ9UGI8 421 aaKnown RBP12.54□□□□□ -0.4
TPM3-211ENST00000368531 METRNQ9UJH8 293 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 TINAGQ9UJW2 476 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 OSGIN1Q9UJX0 560 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 SAMD4AQ9UPU9 718 aaKnown RBP12.54□□□□□ -0.4
TPM3-211ENST00000368531 TMED7Q9Y3B3 224 aa12.54□□□□□ -0.4
TPM3-211ENST00000368531 TRGV8A0A0C4DH27 118 aa12.53□□□□□ -0.4
TPM3-211ENST00000368531 A0A1B0GWA3 101 aa12.53□□□□□ -0.4
TPM3-211ENST00000368531 H0Y3Z8 333 aa12.53□□□□□ -0.4
TPM3-211ENST00000368531 LINC01387J3KSC0 135 aa12.53□□□□□ -0.4
TPM3-211ENST00000368531 PRRG2O14669 202 aa12.53□□□□□ -0.4
TPM3-211ENST00000368531 BCKDKO14874 412 aa12.53□□□□□ -0.4
TPM3-211ENST00000368531 PTNP21246 168 aa12.53□□□□□ -0.4
TPM3-211ENST00000368531 CXCR1P25024 350 aa12.53□□□□□ -0.4
TPM3-211ENST00000368531 ADH6P28332 368 aa12.53□□□□□ -0.4
TPM3-211ENST00000368531 APOBEC1P41238 236 aaKnown RBP12.53□□□□□ -0.4
TPM3-211ENST00000368531 SUCLG1P53597 346 aaKnown RBP12.53□□□□□ -0.4
TPM3-211ENST00000368531 CLDN18P56856 261 aa12.53□□□□□ -0.4
TPM3-211ENST00000368531 TMEM176BQ3YBM2 270 aaPredicted RBP12.53□□□□□ -0.4
TPM3-211ENST00000368531 NHSL2Q5HYW2 709 aa12.53□□□□□ -0.4
TPM3-211ENST00000368531 LCN8Q6JVE9 175 aa12.53□□□□□ -0.4
TPM3-211ENST00000368531 ASRGL1Q7L266 308 aa12.53□□□□□ -0.4
TPM3-211ENST00000368531 ADGRG3Q86Y34 549 aa12.53□□□□□ -0.4
TPM3-211ENST00000368531 EID3Q8N140 333 aa12.53□□□□□ -0.4
TPM3-211ENST00000368531 GEMIN6Q8WXD5 167 aaKnown RBP12.53□□□□□ -0.4
TPM3-211ENST00000368531 ASB9Q96DX5 294 aa12.53□□□□□ -0.4
TPM3-211ENST00000368531 PYURFQ96I23 114 aa12.53□□□□□ -0.4
TPM3-211ENST00000368531 SEPHS2Q99611 448 aa12.53□□□□□ -0.4
TPM3-211ENST00000368531 AMBRA1Q9C0C7 1298 aa12.53□□□□□ -0.4
TPM3-211ENST00000368531 ADAM19Q9H013 955 aa12.53□□□□□ -0.4
TPM3-211ENST00000368531 EVA1AQ9H8M9 152 aa12.53□□□□□ -0.4
TPM3-211ENST00000368531 SELENONQ9NZV5 590 aa12.53□□□□□ -0.4
TPM3-211ENST00000368531 SLC7A8Q9UHI5 535 aa12.53□□□□□ -0.4
TPM3-211ENST00000368531 POMPQ9Y244 141 aa12.53□□□□□ -0.4
TPM3-211ENST00000368531 ZNF835Q9Y2P0 537 aa12.53□□□□□ -0.4
TPM3-211ENST00000368531 AP4B1Q9Y6B7 739 aa12.53□□□□□ -0.4
TPM3-211ENST00000368531 MPDZO75970 2070 aa12.52□□□□□ -0.4
TPM3-211ENST00000368531 A0A0J9YW62 118 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 A0A1W2PNR3 127 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 TMEM72A0PK05 275 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 ELOA3DA6NLF2 546 aaPredicted RBP12.52□□□□□ -0.41
TPM3-211ENST00000368531 J3KTA2 159 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 hCG_2039718K7EN88 272 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 EIF1AYO14602 144 aaKnown RBP12.52□□□□□ -0.41
TPM3-211ENST00000368531 ACOT8O14734 319 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 TNFSF11O14788 317 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 IFNW1P05000 195 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 ZNF708P17019 499 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 HTR3AP46098 478 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 CASP6P55212 293 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 CDH12P55289 794 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 TAS2R41P59536 307 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 RAC1P63000 192 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 TRAP1Q12931 704 aaKnown RBP12.52□□□□□ -0.41
TPM3-211ENST00000368531 SELENBP1Q13228 472 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 PIN1Q13526 163 aaPredicted RBP12.52□□□□□ -0.41
TPM3-211ENST00000368531 FLOT2Q14254 428 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.52□□□□□ -0.416e-18■□□□□ 10.2
TPM3-211ENST00000368531 ELOA3BQ3SY89 546 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 ALG10BQ5I7T1 473 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 EMC4Q5J8M3 183 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 C1QL3Q5VWW1 255 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 PPP4R4Q6NUP7 873 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 PLXDC2Q6UX71 529 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 TSPYL5Q86VY4 417 aaPredicted RBP12.52□□□□□ -0.41
TPM3-211ENST00000368531 DOLPP1Q86YN1 238 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 MEIOBQ8N635 442 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 ELOA3Q8NG57 546 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 ADAMTS16Q8TE57 1224 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 C3orf49Q96BT1 292 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 OR5B2Q96R09 309 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 OR11A1Q9GZK7 315 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 RHCGQ9UBD6 479 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 STOML1Q9UBI4 398 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 CHRNA9Q9UGM1 479 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 KIAA1549Q9HCM3 1950 aa12.52□□□□□ -0.41
TPM3-211ENST00000368531 ZFYVE26Q68DK2 2539 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 ARHGAP21Q5T5U3 1957 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 TCRBV5S2A0A599 114 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 ETV2O00321 342 aaPredicted RBP12.51□□□□□ -0.41
TPM3-211ENST00000368531 DIRAS1O95057 198 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 CPN1P15169 458 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 ELK4P28324 431 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 SLC7A1P30825 629 aa12.51□□□□□ -0.41
TPM3-211ENST00000368531 EIF1AXP47813 144 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms