RNA–Protein interactions for RNA: ENST00000368530.6

TPM3-210, Transcript of tropomyosin 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TPM3, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-210ENST00000368530 A4GNTQ9UNA3 340 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 CHST2Q9Y4C5 530 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 MMACHCQ9Y4U1 282 aa9.1□□□□□ -0.95
TPM3-210ENST00000368530 CPSF4LA6NMK7 179 aaKnown RBP9.09□□□□□ -0.95
TPM3-210ENST00000368530 SYT5O00445 386 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 CDK2AP1O14519 115 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 KIAA0513O60268 411 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 NME2P1O60361 137 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 UGT2B11O75310 529 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 KCNK2O95069 426 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 NKX2-2O95096 273 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 IFI6P09912 130 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 NME2P22392 152 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 PRKAR1BP31321 381 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 MAP3K8P41279 467 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 RGS8P57771 180 aaPredicted RBP9.09□□□□□ -0.95
TPM3-210ENST00000368530 TAS2R41P59536 307 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 IL5RAQ01344 420 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 LARS2Q15031 903 aaKnown RBP9.09□□□□□ -0.95
TPM3-210ENST00000368530 SEC23BQ15437 767 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 NSDHLQ15738 373 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 MAPK14Q16539 360 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 CTU2Q2VPK5 515 aaKnown RBP9.09□□□□□ -0.95
TPM3-210ENST00000368530 DCST1Q5T197 706 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 ZNF691Q5VV52 312 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 NPSR1Q6W5P4 371 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 C3P1Q6ZMU1 363 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 THAP5Q7Z6K1 395 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 LSRQ86X29 649 aaPredicted RBP9.09□□□□□ -0.95
TPM3-210ENST00000368530 ZNF614Q8N883 585 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 TMEM178AQ8NBL3 297 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 AQP11Q8NBQ7 271 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 TSPAN14Q8NG11 270 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 C16orf52Q8NHV5 167 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 PTPMT1Q8WUK0 201 aaPredicted RBP9.09□□□□□ -0.95
TPM3-210ENST00000368530 VSTM2LQ96N03 204 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 OR1F2PQ96R84 312 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 PELOQ9BRX2 385 aaKnown RBP9.09□□□□□ -0.95
TPM3-210ENST00000368530 LMF2Q9BU23 707 aaKnown RBP9.09□□□□□ -0.95
TPM3-210ENST00000368530 ITPAQ9BY32 194 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 GRIP2Q9C0E4 1043 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 OR8D2Q9GZM6 311 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 OR10A5Q9H207 317 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 CDCP1Q9H5V8 836 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 ZNF556Q9HAH1 456 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 PAPOLBQ9NRJ5 636 aaKnown RBP9.09□□□□□ -0.95
TPM3-210ENST00000368530 KLHL28Q9NXS3 571 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 LRFN1Q9P244 771 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 AASSQ9UDR5 926 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 ZNF232Q9UNY5 417 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 IFT52Q9Y366 437 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 GMPPBQ9Y5P6 360 aa9.09□□□□□ -0.95
TPM3-210ENST00000368530 MED13LQ71F56 2210 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 AGAP5A6NIR3 686 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 FAAHO00519 579 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 SLC16A6O15403 523 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 OR10H3O60404 316 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 NTN1O95631 604 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 CLPTM1O96005 669 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 AK1P00568 194 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 GASTP01350 101 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 IGKV1D-16P01601 117 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 CLPSP04118 112 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 DBIP07108 87 aaKnown RBP9.08□□□□□ -0.96
TPM3-210ENST00000368530 ANXA8P13928 327 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 HMGA2P52926 109 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 SMIM11AP58511 58 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 PSG6Q00889 435 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 TLE4Q04727 773 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 CD47Q08722 323 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 FUT7Q11130 342 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 APOFQ13790 326 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 KRTAP21-3Q3LHN1 58 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 FLYWCH1Q4VC44 716 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 RNF220Q5VTB9 566 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 PODNL1Q6PEZ8 512 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 QSOX2Q6ZRP7 698 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 PLEKHM3Q6ZWE6 761 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 RPS19BP1Q86WX3 136 aaKnown RBP9.08□□□□□ -0.96
TPM3-210ENST00000368530 GHDCQ8N2G8 530 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 ZNF615Q8N8J6 731 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 NFAM1Q8NET5 270 aaPredicted RBP9.08□□□□□ -0.96
TPM3-210ENST00000368530 ARSGQ96EG1 525 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 DHRS1Q96LJ7 313 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 PRRC1Q96M27 445 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 LPAR4Q99677 370 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 MCHR1Q99705 422 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 KCNE5Q9UJ90 142 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 POFUT2Q9Y2G5 429 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 OR10H1Q9Y4A9 318 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 CLCA3PQ9Y6N3 262 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 CACNA1CQ13936 2221 aa9.08□□□□□ -0.96
TPM3-210ENST00000368530 IGKV3D-11A0A0A0MRZ8 115 aa9.07□□□□□ -0.96
TPM3-210ENST00000368530 AP3D1O14617 1153 aa9.07□□□□□ -0.96
TPM3-210ENST00000368530 BCAS1O75363 584 aaPredicted RBP9.07□□□□□ -0.96
TPM3-210ENST00000368530 SLC25A12O75746 678 aa9.07□□□□□ -0.96
TPM3-210ENST00000368530 GKN3PP0CG01 181 aa9.07□□□□□ -0.96
TPM3-210ENST00000368530 ABOP16442 354 aa9.07□□□□□ -0.96
TPM3-210ENST00000368530 CBLP22681 906 aa9.07□□□□□ -0.96
TPM3-210ENST00000368530 TRHRP34981 398 aaPredicted RBP9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms