RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 CTSBP07858 339 aa12.9□□□□□ -0.34
USF1-202ENST00000368020 NOS3P29474 1203 aa12.9□□□□□ -0.34
USF1-202ENST00000368020 PGDP52209 483 aa12.9□□□□□ -0.34
USF1-202ENST00000368020 GFERP55789 205 aa12.9□□□□□ -0.34
USF1-202ENST00000368020 FXYD6P3P58550 94 aa12.9□□□□□ -0.34
USF1-202ENST00000368020 DCAF7P61962 342 aa12.9□□□□□ -0.34
USF1-202ENST00000368020 PSPHP78330 225 aa12.9□□□□□ -0.34
USF1-202ENST00000368020 MAT1AQ00266 395 aaKnown RBP12.9□□□□□ -0.34
USF1-202ENST00000368020 DOC2BQ14184 412 aa12.9□□□□□ -0.34
USF1-202ENST00000368020 DDI2Q5TDH0 399 aa12.9□□□□□ -0.34
USF1-202ENST00000368020 ZNF322Q6U7Q0 402 aaPredicted RBP12.9□□□□□ -0.34
USF1-202ENST00000368020 SLC22A16Q86VW1 577 aa12.9□□□□□ -0.34
USF1-202ENST00000368020 OR4F15Q8NGB8 312 aa12.9□□□□□ -0.34
USF1-202ENST00000368020 OR13C2Q8NGS9 318 aa12.9□□□□□ -0.34
USF1-202ENST00000368020 SNRNP27Q8WVK2 155 aaKnown RBP12.9□□□□□ -0.34
USF1-202ENST00000368020 KCNS3Q9BQ31 491 aa12.9□□□□□ -0.34
USF1-202ENST00000368020 MEPEQ9NQ76 525 aaPredicted RBP12.9□□□□□ -0.34
USF1-202ENST00000368020 TRIM36Q9NQ86 728 aa12.9□□□□□ -0.34
USF1-202ENST00000368020 EXOSC3Q9NQT5 275 aaKnown RBP12.9□□□□□ -0.34
USF1-202ENST00000368020 UBQLN4Q9NRR5 601 aa12.9□□□□□ -0.34
USF1-202ENST00000368020 LRIT1Q9P2V4 623 aa12.9□□□□□ -0.34
USF1-202ENST00000368020 PLD2O14939 933 aa12.89□□□□□ -0.35
USF1-202ENST00000368020 NDUFB2O95178 105 aa12.89□□□□□ -0.35
USF1-202ENST00000368020 PNMTP11086 282 aa12.89□□□□□ -0.35
USF1-202ENST00000368020 MAOAP21397 527 aa12.89□□□□□ -0.35
USF1-202ENST00000368020 TNFSF8P32971 234 aa12.89□□□□□ -0.35
USF1-202ENST00000368020 RORAP35398 523 aa12.89□□□□□ -0.35
USF1-202ENST00000368020 PPICP45877 212 aa12.89□□□□□ -0.35
USF1-202ENST00000368020 CD97P48960 835 aa12.89□□□□□ -0.35
USF1-202ENST00000368020 BTG2P78543 158 aa12.89□□□□□ -0.35
USF1-202ENST00000368020 PLAURQ03405 335 aa12.89□□□□□ -0.35
USF1-202ENST00000368020 GALEQ14376 348 aa12.89□□□□□ -0.35
USF1-202ENST00000368020 ISXQ2M1V0 245 aa12.89□□□□□ -0.35
USF1-202ENST00000368020 STEAP3Q658P3 488 aa12.89□□□□□ -0.35
USF1-202ENST00000368020 C22orf42Q6IC83 251 aa12.89□□□□□ -0.35
USF1-202ENST00000368020 LHFPL3Q86UP9 236 aa12.89□□□□□ -0.35
USF1-202ENST00000368020 GPR135Q8IZ08 494 aa12.89□□□□□ -0.35
USF1-202ENST00000368020 POC5Q8NA72 575 aa12.89□□□□□ -0.35
USF1-202ENST00000368020 KIAA1143Q96AT1 154 aaPredicted RBP12.89□□□□□ -0.35
USF1-202ENST00000368020 OTULINQ96BN8 352 aa12.89□□□□□ -0.35
USF1-202ENST00000368020 MRPL48Q96GC5 212 aaKnown RBP12.89□□□□□ -0.35
USF1-202ENST00000368020 NDEL1Q9GZM8 345 aa12.89□□□□□ -0.35
USF1-202ENST00000368020 SEMA5BQ9P283 1151 aa12.89□□□□□ -0.35
USF1-202ENST00000368020 IL20RAQ9UHF4 553 aa12.89□□□□□ -0.35
USF1-202ENST00000368020 ICAM5Q9UMF0 924 aa12.89□□□□□ -0.35
USF1-202ENST00000368020 R4GN57 208 aa12.89□□□□□ -0.35
USF1-202ENST00000368020 RALGAPA1Q6GYQ0 2036 aa12.89□□□□□ -0.35
USF1-202ENST00000368020 OTOGLQ3ZCN5 2332 aa12.89□□□□□ -0.35
USF1-202ENST00000368020 A0A087WUJ7 227 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 A0A1B0GTQ1 180 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 C17orf105B2RV13 164 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 WWP2O00308 870 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 SOCS6O14544 535 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 IDH3BO43837 385 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 APOL3O95236 402 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 MT-ND5P03915 603 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 CFIP05156 583 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 SYPP08247 313 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 HPGDP15428 266 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 GLB1P16278 677 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 MPLP40238 635 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 RPS25P62851 125 aaKnown RBP12.88□□□□□ -0.35
USF1-202ENST00000368020 LGALS3BPQ08380 585 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 KLHL26Q53HC5 615 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 TRIM61Q5EBN2 209 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 PLA2G2CQ5R387 149 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 LCN1P1Q5VSP4 162 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 CADM2Q8N3J6 435 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 SLC37A3Q8NCC5 494 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 FAM71CQ8NEG0 241 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 ATP6V1C2Q8NEY4 427 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 BBS1Q8NFJ9 593 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 OR4N2Q8NGD1 307 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 OR51G2Q8NGK0 314 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 SGTBQ96EQ0 304 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 PTCHD1Q96NR3 888 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 ZNF649Q9BS31 505 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 BARHL1Q9BZE3 327 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 SERTAD3Q9UJW9 196 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 PCDHGB7Q9Y5F8 929 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 PCDH15Q96QU1 1955 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 IGHV1OR21-1A0A087WYE8 117 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 DAPL1A0PJW8 107 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 FRG2CA6NGY1 282 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 C12orf71A8MTZ7 269 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 CTDSP2O14595 271 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 SLC2A10O95528 541 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 IL33O95760 270 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 F8A1P23610 371 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 SDC2P34741 201 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 PRPS1P60891 318 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 RPS7P62081 194 aaKnown RBP12.88□□□□□ -0.35
USF1-202ENST00000368020 CRYZQ08257 329 aaKnown RBP12.88□□□□□ -0.35
USF1-202ENST00000368020 TCF15Q12870 199 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 DNASE1L3Q13609 305 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 HLA-BQ31612 363 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 TBC1D25Q3MII6 688 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 WBP2NLQ6ICG8 309 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 SHFQ7M4L6 423 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 NUP54Q7Z3B4 507 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms