RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 C1QL4Q86Z23 238 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 MMGT1Q8N4V1 131 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 SIGLECL1Q8N7X8 197 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 NUP37Q8NFH4 326 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 CEP70Q8NHQ1 597 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 NANPQ8TBE9 248 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 DVL3Q92997 716 aaPredicted RBP12.64□□□□□ -0.39
VAMP4-202ENST00000367740 APIPQ96GX9 242 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 MMP27Q9H306 513 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 ZNF442Q9H7R0 627 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 SEC61A2Q9H9S3 476 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 DYNLRB1Q9NP97 96 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 PDP1Q9P0J1 537 aaPredicted RBP12.64□□□□□ -0.39
VAMP4-202ENST00000367740 ZDHHC2Q9UIJ5 367 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 GRID1Q9ULK0 1009 aa12.64□□□□□ -0.39
VAMP4-202ENST00000367740 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 ESPNB1AK53 854 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 SULT2B1O00204 365 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 GPR171O14626 319 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 C2P06681 752 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 ADRA2AP08913 450 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 PRPS2P11908 318 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 HSD3B1P14060 373 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 TSPAN8P19075 237 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 NPR2P20594 1047 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 MDKP21741 143 aaPredicted RBP12.63□□□□□ -0.39
VAMP4-202ENST00000367740 HSD3B2P26439 372 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 THBS4P35443 961 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 SLC16A1P53985 500 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 CSNK2A1P68400 391 aaPredicted RBP12.63□□□□□ -0.39
VAMP4-202ENST00000367740 TGFBR3Q03167 851 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 SRSF4Q08170 494 aaKnown RBP12.63□□□□□ -0.39
VAMP4-202ENST00000367740 ZP4Q12836 540 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 DUSP5Q16690 384 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 SPIN4Q56A73 249 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 SPATA21Q7Z572 469 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 CTAGE3PQ8IX95 158 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 CDRT4Q8N9R6 151 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 SLC16A11Q8NCK7 471 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 CDC26Q8NHZ8 85 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 ACTRT1Q8TDG2 376 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 CKAP2Q8WWK9 683 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 GIMAP5Q96F15 307 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 ACPTQ9BZG2 426 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 QRSL1Q9H0R6 528 aaKnown RBP12.63□□□□□ -0.39
VAMP4-202ENST00000367740 SLC52A3Q9NQ40 469 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 UPB1Q9UBR1 384 aa12.63□□□□□ -0.39
VAMP4-202ENST00000367740 A0A0G2JMP0 313 aa12.62□□□□□ -0.39
VAMP4-202ENST00000367740 A0A0X1KG70 313 aa12.62□□□□□ -0.39
VAMP4-202ENST00000367740 STX16-NPEPL1H3BU86 382 aa12.62□□□□□ -0.39
VAMP4-202ENST00000367740 STX16O14662 325 aa12.62□□□□□ -0.39
VAMP4-202ENST00000367740 KLHL2O95198 593 aa12.62□□□□□ -0.39
VAMP4-202ENST00000367740 OTCP00480 354 aa12.62□□□□□ -0.39
VAMP4-202ENST00000367740 RPS17P08708 135 aaKnown RBP12.62□□□□□ -0.39
VAMP4-202ENST00000367740 CECR9P0C854 216 aa12.62□□□□□ -0.39
VAMP4-202ENST00000367740 MPGP29372 298 aa12.62□□□□□ -0.39
VAMP4-202ENST00000367740 HGFACQ04756 655 aa12.62□□□□□ -0.39
VAMP4-202ENST00000367740 ACSM2AQ08AH3 577 aa12.62□□□□□ -0.39
VAMP4-202ENST00000367740 C2orf80Q0P641 193 aa12.62□□□□□ -0.39
VAMP4-202ENST00000367740 QPRTQ15274 297 aa12.62□□□□□ -0.39
VAMP4-202ENST00000367740 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.62□□□□□ -0.39
VAMP4-202ENST00000367740 TSPO2Q5TGU0 170 aa12.62□□□□□ -0.39
VAMP4-202ENST00000367740 ACSM2BQ68CK6 577 aa12.62□□□□□ -0.39
VAMP4-202ENST00000367740 GALNT18Q6P9A2 607 aa12.62□□□□□ -0.39
VAMP4-202ENST00000367740 OR4M2Q8NGB6 313 aa12.62□□□□□ -0.39
VAMP4-202ENST00000367740 OR4F15Q8NGB8 312 aa12.62□□□□□ -0.39
VAMP4-202ENST00000367740 PYROXD1Q8WU10 500 aa12.62□□□□□ -0.39
VAMP4-202ENST00000367740 OTUB1Q96FW1 271 aaPredicted RBP12.62□□□□□ -0.39
VAMP4-202ENST00000367740 BOD1Q96IK1 185 aa12.62□□□□□ -0.39
VAMP4-202ENST00000367740 ZMAT3Q9HA38 289 aaKnown RBP12.62□□□□□ -0.39
VAMP4-202ENST00000367740 MIEF1Q9NQG6 463 aa12.62□□□□□ -0.39
VAMP4-202ENST00000367740 TAS2R7Q9NYW3 318 aa12.62□□□□□ -0.39
VAMP4-202ENST00000367740 NFU1Q9UMS0 254 aa12.62□□□□□ -0.39
VAMP4-202ENST00000367740 J3QLI3 93 aa12.61□□□□□ -0.39
VAMP4-202ENST00000367740 MANBAO00462 879 aa12.61□□□□□ -0.39
VAMP4-202ENST00000367740 OR4F21O95013 312 aa12.61□□□□□ -0.39
VAMP4-202ENST00000367740 ANXA4P09525 319 aaPredicted RBP12.61□□□□□ -0.39
VAMP4-202ENST00000367740 ACHEP22303 614 aa12.61□□□□□ -0.39
VAMP4-202ENST00000367740 COL8A2P25067 703 aa12.61□□□□□ -0.39
VAMP4-202ENST00000367740 FPR2P25090 351 aa12.61□□□□□ -0.39
VAMP4-202ENST00000367740 GSTM5P46439 218 aa12.61□□□□□ -0.39
VAMP4-202ENST00000367740 MYBPC1Q00872 1141 aa12.61□□□□□ -0.39
VAMP4-202ENST00000367740 ZNF763Q0D2J5 394 aa12.61□□□□□ -0.39
VAMP4-202ENST00000367740 HSPB3Q12988 150 aa12.61□□□□□ -0.39
VAMP4-202ENST00000367740 TIGD2Q4W5G0 525 aa12.61□□□□□ -0.39
VAMP4-202ENST00000367740 KLHL26Q53HC5 615 aa12.61□□□□□ -0.39
VAMP4-202ENST00000367740 SYT14P1Q58G82 188 aa12.61□□□□□ -0.39
VAMP4-202ENST00000367740 ANKRD16Q6P6B7 361 aa12.61□□□□□ -0.39
VAMP4-202ENST00000367740 CYS1Q717R9 158 aa12.61□□□□□ -0.39
VAMP4-202ENST00000367740 DOK3Q7L591 496 aa12.61□□□□□ -0.39
VAMP4-202ENST00000367740 ZNF551Q7Z340 670 aaPredicted RBP12.61□□□□□ -0.39
VAMP4-202ENST00000367740 CCDC91Q7Z6B0 441 aa12.61□□□□□ -0.39
VAMP4-202ENST00000367740 CCDC103Q8IW40 242 aa12.61□□□□□ -0.39
VAMP4-202ENST00000367740 COX18Q8N8Q8 333 aa12.61□□□□□ -0.39
VAMP4-202ENST00000367740 SYT14Q8NB59 555 aa12.61□□□□□ -0.39
VAMP4-202ENST00000367740 PIGXQ8TBF5 258 aa12.61□□□□□ -0.39
VAMP4-202ENST00000367740 ZNF483Q8TF39 744 aaPredicted RBP12.61□□□□□ -0.39
VAMP4-202ENST00000367740 OBP2BQ9NPH6 170 aa12.61□□□□□ -0.39
VAMP4-202ENST00000367740 ZNF275Q9NSD4 429 aaPredicted RBP12.61□□□□□ -0.39
VAMP4-202ENST00000367740 CRNNQ9UBG3 495 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms