RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 ITM2AO43736 263 aa13.15□□□□□ -0.3
CTSD-202ENST00000367196 H6PDO95479 791 aa13.15□□□□□ -0.3
CTSD-202ENST00000367196 CPSF4O95639 269 aaKnown RBP13.15□□□□□ -0.3
CTSD-202ENST00000367196 OR12D1P0DN82 309 aa13.15□□□□□ -0.3
CTSD-202ENST00000367196 S100A3P33764 101 aa13.15□□□□□ -0.3
CTSD-202ENST00000367196 HTR3AP46098 478 aa13.15□□□□□ -0.3
CTSD-202ENST00000367196 SLC1A6P48664 564 aa13.15□□□□□ -0.3
CTSD-202ENST00000367196 CLK1P49759 484 aaKnown RBP13.15□□□□□ -0.3
CTSD-202ENST00000367196 GNA13Q14344 377 aa13.15□□□□□ -0.3
CTSD-202ENST00000367196 PDK3Q15120 406 aa13.15□□□□□ -0.3
CTSD-202ENST00000367196 PPA1Q15181 289 aa13.15□□□□□ -0.3
CTSD-202ENST00000367196 STK11Q15831 433 aa13.15□□□□□ -0.3
CTSD-202ENST00000367196 ZNF672Q499Z4 452 aaPredicted RBP13.15□□□□□ -0.3
CTSD-202ENST00000367196 TIMM23BQ5SRD1 257 aa13.15□□□□□ -0.3
CTSD-202ENST00000367196 SAXO2Q658L1 398 aa13.15□□□□□ -0.3
CTSD-202ENST00000367196 TYW3Q6IPR3 259 aaKnown RBP13.15□□□□□ -0.3
CTSD-202ENST00000367196 TNFAIP8L2Q6P589 184 aaPredicted RBP13.15□□□□□ -0.3
CTSD-202ENST00000367196 ANKRD46Q86W74 232 aa13.15□□□□□ -0.3
CTSD-202ENST00000367196 CMIPQ8IY22 773 aa13.15□□□□□ -0.3
CTSD-202ENST00000367196 CLEC4FQ8N1N0 589 aa13.15□□□□□ -0.3
CTSD-202ENST00000367196 ARFGAP2Q8N6H7 521 aa13.15□□□□□ -0.3
CTSD-202ENST00000367196 FAM71CQ8NEG0 241 aa13.15□□□□□ -0.3
CTSD-202ENST00000367196 PIGXQ8TBF5 258 aa13.15□□□□□ -0.3
CTSD-202ENST00000367196 RAB3IL1Q8TBN0 382 aa13.15□□□□□ -0.3
CTSD-202ENST00000367196 PIWIL2Q8TC59 973 aaKnown RBP13.15□□□□□ -0.3
CTSD-202ENST00000367196 ROPN1LQ96C74 230 aa13.15□□□□□ -0.3
CTSD-202ENST00000367196 NEURL3Q96EH8 262 aa13.15□□□□□ -0.3
CTSD-202ENST00000367196 QRSL1Q9H0R6 528 aaKnown RBP13.15□□□□□ -0.3
CTSD-202ENST00000367196 ALG2Q9H553 416 aa13.15□□□□□ -0.3
CTSD-202ENST00000367196 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.15□□□□□ -0.3
CTSD-202ENST00000367196 MARCOQ9UEW3 520 aaPredicted RBP13.15□□□□□ -0.3
CTSD-202ENST00000367196 CHRNA9Q9UGM1 479 aa13.15□□□□□ -0.3
CTSD-202ENST00000367196 LIPT1Q9Y234 373 aa13.15□□□□□ -0.3
CTSD-202ENST00000367196 HDGFL3Q9Y3E1 203 aa13.15□□□□□ -0.3
CTSD-202ENST00000367196 FN1P02751 2386 aaKnown RBP13.15□□□□□ -0.3
CTSD-202ENST00000367196 PRR14LQ5THK1 2151 aa13.14□□□□□ -0.31
CTSD-202ENST00000367196 IGKV3D-15A0A087WSY6 115 aa13.14□□□□□ -0.31
CTSD-202ENST00000367196 A0A1W2PP18 115 aa13.14□□□□□ -0.31
CTSD-202ENST00000367196 ZNF814B7Z6K7 855 aa13.14□□□□□ -0.31
CTSD-202ENST00000367196 GPR171O14626 319 aa13.14□□□□□ -0.31
CTSD-202ENST00000367196 PMS2P2O95744 297 aa13.14□□□□□ -0.31
CTSD-202ENST00000367196 TFPIP10646 304 aa13.14□□□□□ -0.31
CTSD-202ENST00000367196 UQCRBP14927 111 aa13.14□□□□□ -0.31
CTSD-202ENST00000367196 GGT1P19440 569 aa13.14□□□□□ -0.31
CTSD-202ENST00000367196 COX5AP20674 150 aa13.14□□□□□ -0.31
CTSD-202ENST00000367196 PGM1P36871 562 aa13.14□□□□□ -0.31
CTSD-202ENST00000367196 BSPH1Q075Z2 132 aa13.14□□□□□ -0.31
CTSD-202ENST00000367196 CASP8Q14790 479 aa13.14□□□□□ -0.31
CTSD-202ENST00000367196 TSC22D1Q15714 1073 aa13.14□□□□□ -0.31
CTSD-202ENST00000367196 GPAT3Q53EU6 434 aa13.14□□□□□ -0.31
CTSD-202ENST00000367196 AP1ARQ63HQ0 302 aa13.14□□□□□ -0.31
CTSD-202ENST00000367196 ABLIM2Q6H8Q1 611 aa13.14□□□□□ -0.31
CTSD-202ENST00000367196 MTDHQ86UE4 582 aaKnown RBP13.14□□□□□ -0.31
CTSD-202ENST00000367196 SMAP2Q8WU79 429 aaPredicted RBP13.14□□□□□ -0.31
CTSD-202ENST00000367196 RADILQ96JH8 1075 aa13.14□□□□□ -0.31
CTSD-202ENST00000367196 ZNF300Q96RE9 604 aaPredicted RBP13.14□□□□□ -0.31
CTSD-202ENST00000367196 SLC35A5Q9BS91 424 aa13.14□□□□□ -0.31
CTSD-202ENST00000367196 NUF2Q9BZD4 464 aa13.14□□□□□ -0.31
CTSD-202ENST00000367196 SAP130Q9H0E3 1048 aa13.14□□□□□ -0.31
CTSD-202ENST00000367196 MEAF6Q9HAF1 191 aa13.14□□□□□ -0.31
CTSD-202ENST00000367196 BTNL2Q9UIR0 455 aa13.14□□□□□ -0.31
CTSD-202ENST00000367196 KCNE5Q9UJ90 142 aa13.14□□□□□ -0.31
CTSD-202ENST00000367196 HAO1Q9UJM8 370 aa13.14□□□□□ -0.31
CTSD-202ENST00000367196 SCN2BO60939 215 aa13.13□□□□□ -0.31
CTSD-202ENST00000367196 LYZL6O75951 148 aa13.13□□□□□ -0.31
CTSD-202ENST00000367196 DHRS4L1P0CG22 281 aa13.13□□□□□ -0.31
CTSD-202ENST00000367196 IDUAP35475 653 aa13.13□□□□□ -0.31
CTSD-202ENST00000367196 MAP2K6P52564 334 aa13.13□□□□□ -0.31
CTSD-202ENST00000367196 KCNJ10P78508 379 aa13.13□□□□□ -0.31
CTSD-202ENST00000367196 STX3Q13277 289 aa13.13□□□□□ -0.31
CTSD-202ENST00000367196 CLEC12BQ2HXU8 276 aa13.13□□□□□ -0.31
CTSD-202ENST00000367196 FAM174BQ3ZCQ3 159 aa13.13□□□□□ -0.31
CTSD-202ENST00000367196 SPANXN4Q5MJ08 99 aa13.13□□□□□ -0.31
CTSD-202ENST00000367196 OGFOD2Q6N063 350 aa13.13□□□□□ -0.31
CTSD-202ENST00000367196 DNAJC14Q6Y2X3 702 aaPredicted RBP13.13□□□□□ -0.31
CTSD-202ENST00000367196 FRRS1Q6ZNA5 592 aa13.13□□□□□ -0.31
CTSD-202ENST00000367196 RAB8BQ92930 207 aa13.13□□□□□ -0.31
CTSD-202ENST00000367196 APH1AQ96BI3 265 aa13.13□□□□□ -0.31
CTSD-202ENST00000367196 CCDC115Q96NT0 180 aa13.13□□□□□ -0.31
CTSD-202ENST00000367196 ZBTB18Q99592 522 aa13.13□□□□□ -0.31
CTSD-202ENST00000367196 CCDC106Q9BWC9 280 aa13.13□□□□□ -0.31
CTSD-202ENST00000367196 CENPHQ9H3R5 247 aa13.13□□□□□ -0.31
CTSD-202ENST00000367196 BARX1Q9HBU1 254 aaPredicted RBP13.13□□□□□ -0.31
CTSD-202ENST00000367196 KCNK9Q9NPC2 374 aa13.13□□□□□ -0.31
CTSD-202ENST00000367196 CTPS2Q9NRF8 586 aa13.13□□□□□ -0.31
CTSD-202ENST00000367196 PRSS50Q9UI38 385 aa13.13□□□□□ -0.31
CTSD-202ENST00000367196 ING1Q9UK53 422 aaPredicted RBP13.13□□□□□ -0.31
CTSD-202ENST00000367196 MGAT4BQ9UQ53 548 aa13.13□□□□□ -0.31
CTSD-202ENST00000367196 NOSIPQ9Y314 301 aaKnown RBP13.13□□□□□ -0.31
CTSD-202ENST00000367196 CSPG4Q6UVK1 2322 aa13.13□□□□□ -0.31
CTSD-202ENST00000367196 CENPVL1A0A0U1RR11 272 aa13.12□□□□□ -0.31
CTSD-202ENST00000367196 OR5H1A6NKK0 313 aa13.12□□□□□ -0.31
CTSD-202ENST00000367196 OVOL3O00110 214 aa13.12□□□□□ -0.31
CTSD-202ENST00000367196 EIF1BO60739 113 aaKnown RBP13.12□□□□□ -0.31
CTSD-202ENST00000367196 BGNP21810 368 aa13.12□□□□□ -0.31
CTSD-202ENST00000367196 PCSK6P29122 969 aa13.12□□□□□ -0.31
CTSD-202ENST00000367196 RYKP34925 604 aa13.12□□□□□ -0.31
CTSD-202ENST00000367196 MAGEA8P43361 318 aa13.12□□□□□ -0.31
CTSD-202ENST00000367196 CASP9P55211 416 aa13.12□□□□□ -0.31
CTSD-202ENST00000367196 VEZF1Q14119 521 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms