RNA–Protein interactions for RNA: ENST00000361545.9

CLIP2-202, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 1 (best) BASIC

Gene CLIP2, Length 5,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-202ENST00000361545 SIRPAP78324 504 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 PLAG1Q6DJT9 500 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 ZNF322Q6U7Q0 402 aaPredicted RBP17.3■□□□□ 0.36
CLIP2-202ENST00000361545 BAIAP2L2Q6UXY1 529 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 RETREG3Q86VR2 466 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 PAPD5Q8NDF8 572 aaKnown RBP17.3■□□□□ 0.36
CLIP2-202ENST00000361545 AMDHD1Q96NU7 426 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 RP1L1Q8IWN7 2480 aaPredicted RBP17.3■□□□□ 0.36
CLIP2-202ENST00000361545 H7C1C5 153 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 CTNSO60931 367 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 ALOX12BO75342 701 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 LSSP48449 732 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 AKR1C2P52895 323 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 CLDN17P56750 224 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 LCN6P62502 163 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 PGGHGQ32M88 737 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 PLEKHN1Q494U1 663 aaPredicted RBP17.3■□□□□ 0.36
CLIP2-202ENST00000361545 OR7E24Q6IFN5 339 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 VHLLQ6RSH7 139 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 MUCL1Q96DR8 90 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 ATP13A2Q9NQ11 1180 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 PRDM9Q9NQV7 894 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 HSPB11Q9Y547 144 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 IGLV3-27P01718 113 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 AMY2AP04746 511 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 DBHP09172 617 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 TFPTP0C1Z6 253 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 SLC35E2P0CK97 266 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 P2RY12Q9H244 342 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 DYNLRB1Q9NP97 96 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 SLC6A5Q9Y345 797 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 F5P12259 2224 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 LOC102725191A0A1B0GVB3 256 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 GABBR2O75899 941 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 ACTL6BO94805 426 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 RAC2P15153 192 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 CD1CP29017 333 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 TMEM196Q5HYL7 178 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 TMEM207Q6UWW9 146 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 FAM83HQ6ZRV2 1179 aaPredicted RBP17.3■□□□□ 0.36
CLIP2-202ENST00000361545 CSNK2A3Q8NEV1 391 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 OR5H2Q8NGV7 314 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 SLC2A12Q8TD20 617 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 ZNF845Q96IR2 970 aaPredicted RBP17.3■□□□□ 0.36
CLIP2-202ENST00000361545 C4orf36Q96KX1 117 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 TRBV4-1A0A0J9YWV2 114 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 NOTOA8MTQ0 251 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 KCNK5O95279 499 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 DDAH2O95865 285 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 SERPINA5P05154 406 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 GNAO1P09471 354 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 BMP4P12644 408 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 FXYD4P59646 89 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 GARNL3Q5VVW2 1013 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 SLC48A1Q6P1K1 146 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 OLIG3Q7RTU3 272 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 ZDHHC5Q9C0B5 715 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 B3GNT3Q9Y2A9 372 aa17.3■□□□□ 0.36
CLIP2-202ENST00000361545 SLC5A10A0PJK1 596 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 ARNTP27540 789 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 DEFA5Q01523 94 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 B4GAT1O43505 415 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 CAMK2DQ13557 499 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 NTRK2Q16620 822 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 NKPD1Q17RQ9 610 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 SLC6A19Q695T7 634 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 FRMPD2BQ6IN97 320 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 SLC16A14Q7RTX9 510 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 CENPSQ8N2Z9 138 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 SLC46A1Q96NT5 459 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 ANKRD60Q9BZ19 345 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 PCDHB10Q9UN67 800 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 MMACHCQ9Y4U1 282 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 TMEM269A0A1B0GVZ9 245 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 IGLV3-25P01717 112 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 POLR2HP52434 150 aaKnown RBP17.29■□□□□ 0.36
CLIP2-202ENST00000361545 GPR50Q13585 617 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 SLC22A10Q63ZE4 541 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 NIPAL3Q6P499 406 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 UBALD2Q8IYN6 164 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 CREB3L1Q96BA8 519 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 PDFQ9HBH1 243 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 OBP2BQ9NPH6 170 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 TOXO94900 526 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 CAPNS1P04632 268 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 H2AFB2P0C5Z0 115 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 TNFSF4P23510 183 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 SLC19A1P41440 591 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 PTH2RP49190 550 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 RPL19P84098 196 aaKnown RBP17.29■□□□□ 0.36
CLIP2-202ENST00000361545 PDE7AQ13946 482 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 GPR139Q6DWJ6 353 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 Q6ZS52 159 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 AAED1Q7RTV5 226 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 TOMM40LQ969M1 308 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 VN1R3Q9BXE9 311 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 RHBDD3Q9Y3P4 386 aa17.29■□□□□ 0.36
CLIP2-202ENST00000361545 SLC43A1O75387 559 aa17.28■□□□□ 0.36
CLIP2-202ENST00000361545 GK3PQ14409 553 aa17.28■□□□□ 0.36
CLIP2-202ENST00000361545 NKAIN1Q4KMZ8 207 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms