RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 GIPC3Q8TF64 312 aa21.86■■□□□ 1.09
CHKA-202ENST00000356135 TMEM41AQ96HV5 264 aa21.86■■□□□ 1.09
CHKA-202ENST00000356135 PNPLA3Q9NST1 481 aa21.86■■□□□ 1.09
CHKA-202ENST00000356135 VDAC3Q9Y277 283 aa21.86■■□□□ 1.09
CHKA-202ENST00000356135 TRAPPC13A5PLN9 417 aa21.85■■□□□ 1.09
CHKA-202ENST00000356135 ARRDC5A6NEK1 342 aa21.85■■□□□ 1.09
CHKA-202ENST00000356135 OR5F1O95221 314 aa21.85■■□□□ 1.09
CHKA-202ENST00000356135 PGCP20142 388 aa21.85■■□□□ 1.09
CHKA-202ENST00000356135 RFC3P40938 356 aa21.85■■□□□ 1.09
CHKA-202ENST00000356135 MYBPC1Q00872 1141 aa21.85■■□□□ 1.09
CHKA-202ENST00000356135 FGD3Q5JSP0 725 aa21.85■■□□□ 1.09
CHKA-202ENST00000356135 COLEC12Q5KU26 742 aa21.85■■□□□ 1.09
CHKA-202ENST00000356135 TTC23Q5W5X9 447 aa21.85■■□□□ 1.09
CHKA-202ENST00000356135 TIGD3Q6B0B8 471 aa21.85■■□□□ 1.09
CHKA-202ENST00000356135 KRT80Q6KB66 452 aa21.85■■□□□ 1.09
CHKA-202ENST00000356135 WDR88Q6ZMY6 472 aa21.85■■□□□ 1.09
CHKA-202ENST00000356135 OFCC1Q8IZS5 231 aa21.85■■□□□ 1.09
CHKA-202ENST00000356135 KIF17Q9P2E2 1029 aa21.85■■□□□ 1.09
CHKA-202ENST00000356135 TNRC6AQ8NDV7 1962 aaKnown RBP21.85■■□□□ 1.09
CHKA-202ENST00000356135 A0A0B4J2E0 115 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 A0A1B0GX12 115 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 SHISA8B8ZZ34 492 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 CDK2AP1O14519 115 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 CD46P15529 392 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 FOXK1P85037 733 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 ST3GAL3Q11203 375 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 SEC23BQ15437 767 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 MICAQ29983 383 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 ZNF766Q5HY98 468 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 WBP2NLQ6ICG8 309 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 ZNF613Q6PF04 617 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 OR2M7Q8NG81 312 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 SLC7A13Q8TCU3 470 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 ALPK1Q96QP1 1244 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 PRSS27Q9BQR3 290 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 FAM118AQ9NWS6 357 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 RPS6KB2Q9UBS0 482 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 SCOCQ9UIL1 159 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 PCDHGA9Q9Y5G4 932 aaKnown RBP21.84■■□□□ 1.09
CHKA-202ENST00000356135 NME2P1O60361 137 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 TNFAIP8O95379 198 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 RFPL3SP0C7P2 107 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 NME2P22392 152 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 ELAVL4P26378 380 aaKnown RBP21.84■■□□□ 1.09
CHKA-202ENST00000356135 MSX1P28360 303 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 ALG10BQ5I7T1 473 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 ATG16L2Q8NAA4 619 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 OR10G2Q8NGC3 310 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 SNRNP27Q8WVK2 155 aaKnown RBP21.84■■□□□ 1.09
CHKA-202ENST00000356135 C3orf49Q96BT1 292 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 ABHD17AQ96GS6 310 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 C5orf34Q96MH7 638 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 BATF3Q9NR55 127 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 TAS2R10Q9NYW0 307 aa21.84■■□□□ 1.09
CHKA-202ENST00000356135 LRRC3CA6NJW4 275 aa21.83■■□□□ 1.09
CHKA-202ENST00000356135 EIF4E1BA6NMX2 242 aaKnown RBP21.83■■□□□ 1.09
CHKA-202ENST00000356135 CDH2P19022 906 aaPredicted RBP21.83■■□□□ 1.09
CHKA-202ENST00000356135 FOXO1Q12778 655 aa21.83■■□□□ 1.09
CHKA-202ENST00000356135 PODNL1Q6PEZ8 512 aa21.83■■□□□ 1.09
CHKA-202ENST00000356135 POMZP3Q6PJE2 187 aa21.83■■□□□ 1.09
CHKA-202ENST00000356135 KDF1Q8NAX2 398 aaPredicted RBP21.83■■□□□ 1.09
CHKA-202ENST00000356135 ZNF555Q8NEP9 628 aa21.83■■□□□ 1.09
CHKA-202ENST00000356135 TMEM255BQ8WV15 326 aa21.83■■□□□ 1.09
CHKA-202ENST00000356135 SCMH1Q96GD3 660 aa21.83■■□□□ 1.09
CHKA-202ENST00000356135 FAM173AQ9BQD7 235 aa21.83■■□□□ 1.09
CHKA-202ENST00000356135 ZNF696Q9H7X3 374 aa21.83■■□□□ 1.09
CHKA-202ENST00000356135 MED17Q9NVC6 651 aa21.83■■□□□ 1.09
CHKA-202ENST00000356135 CNTRLQ7Z7A1 2325 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 A0A1W2PRQ8 180 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 FAAHO00519 579 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 SLC16A6O15403 523 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 MITFO75030 526 aaPredicted RBP21.82■■□□□ 1.08
CHKA-202ENST00000356135 ANXA8P13928 327 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 TACR3P29371 465 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 IFNA8P32881 189 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 SLC1A3P43003 542 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 SMIM11AP58511 58 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 DGCR6Q14129 220 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 TRAM2Q15035 370 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 TMEM154Q6P9G4 183 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 ULK3Q6PHR2 472 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 OR5M1Q8NGP8 315 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 NR4A3Q92570 626 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 C1GALT1C1Q96EU7 318 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 FUZQ9BT04 418 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 POLR2J2Q9GZM3 115 aaKnown RBP21.82■■□□□ 1.08
CHKA-202ENST00000356135 POLR2J3Q9H1A7 115 aaKnown RBP21.82■■□□□ 1.08
CHKA-202ENST00000356135 KRT84Q9NSB2 600 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 CHD8Q9HCK8 2581 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 MKRN2OSH3BPM6 223 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 CLIC3O95833 236 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 GP1BBP13224 206 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 CCNA2P20248 432 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 SUMO3P55854 103 aaPredicted RBP21.82■■□□□ 1.08
CHKA-202ENST00000356135 DCST1Q5T197 706 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 PNPLA5Q7Z6Z6 429 aaPredicted RBP21.82■■□□□ 1.08
CHKA-202ENST00000356135 P3H2Q8IVL5 708 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 ADAM19Q9H013 955 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 PTGES2Q9H7Z7 377 aa21.82■■□□□ 1.08
CHKA-202ENST00000356135 KLF13Q9Y2Y9 288 aaPredicted RBP21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms