RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 S100A12P80511 92 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 CFHR1Q03591 330 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 TBCEQ15813 527 aaPredicted RBP9.36□□□□□ -0.91
SYNE1-203ENST00000354674 MRM1Q6IN84 353 aaKnown RBP9.36□□□□□ -0.91
SYNE1-203ENST00000354674 ZNF793Q6ZN11 406 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 DBX2Q6ZNG2 339 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 ATCAYQ86WG3 371 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 NUDT13Q86X67 352 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 ZNF614Q8N883 585 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 ZNF527Q8NB42 609 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 OTUB1Q96FW1 271 aaPredicted RBP9.36□□□□□ -0.91
SYNE1-203ENST00000354674 COL21A1Q96P44 957 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 POLR2J2Q9GZM3 115 aaKnown RBP9.36□□□□□ -0.91
SYNE1-203ENST00000354674 ABCG5Q9H222 651 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 SERHLQ9NQF3 203 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 SLCO1C1Q9NYB5 712 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 FKBP7Q9Y680 259 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 MDC1Q14676 2089 aaKnown RBP9.36□□□□□ -0.91
SYNE1-203ENST00000354674 GNG14A0A1W2PPG7 69 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 TLCD2A6NGC4 264 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 GABRR3A8MPY1 467 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 RTCAO00442 366 aaKnown RBP9.36□□□□□ -0.91
SYNE1-203ENST00000354674 P2RX6O15547 441 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 SIGLEC6O43699 453 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 AKR7A3O95154 331 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 HTR3BO95264 441 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 NR2C1P13056 603 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 PVALBP20472 110 aaPredicted RBP9.36□□□□□ -0.91
SYNE1-203ENST00000354674 CD1CP29017 333 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 MPLP40238 635 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 OR1E2P47887 323 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 OR1D5P58170 312 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 MC2RQ01718 297 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 OPCMLQ14982 345 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 NR0B2Q15466 257 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 MAPKAPK3Q16644 382 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 CCNJQ5T5M9 372 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 WDR74Q6RFH5 385 aaPredicted RBP9.36□□□□□ -0.91
SYNE1-203ENST00000354674 RRM2BQ7LG56 351 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 IPCEF1Q8WWN9 437 aaPredicted RBP9.36□□□□□ -0.91
SYNE1-203ENST00000354674 GATAD2BQ8WXI9 593 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 GAL3ST3Q96A11 431 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 TM4SF18Q96CE8 201 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 TCTN2Q96GX1 697 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 FEVQ99581 238 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 MACROD1Q9BQ69 325 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 TGIF2Q9GZN2 237 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 PIGUQ9H490 435 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 REEP4Q9H6H4 257 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 FAM60AQ9NP50 221 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 DNAJC27Q9NZQ0 273 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 DHCR7Q9UBM7 475 aaKnown RBP9.36□□□□□ -0.91
SYNE1-203ENST00000354674 A3GALT2U3KPV4 340 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 WDFY4Q6ZS81 3184 aa9.36□□□□□ -0.91
SYNE1-203ENST00000354674 H0YGG7 62 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 TMPRSS11DO60235 418 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 SPDEFO95238 335 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 OPN1SWP03999 348 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 GBAP04062 536 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 FURINP09958 794 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 NDUFB7P17568 137 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 PSMA1P25786 263 aaKnown RBP9.35□□□□□ -0.91
SYNE1-203ENST00000354674 SELENOPP49908 381 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 CLDN20P56880 219 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 ARF3P61204 181 aaPredicted RBP9.35□□□□□ -0.91
SYNE1-203ENST00000354674 LRIF1Q5T3J3 769 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 C3P1Q6ZMU1 363 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 RNF130Q86XS8 419 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 CAMKVQ8NCB2 501 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 OR52P1PQ8NH57 321 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 ZDHHC12Q96GR4 267 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 PYURFQ96I23 114 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 HHATLQ9HCP6 504 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 BABAM2Q9NXR7 383 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 VPS13AQ96RL7 3174 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 TRBV5-3A0A0A0MS03 114 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 PMS2P1A4D2B8 440 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 SLC9B1P1A6NJY1 282 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 ITGAMP11215 1152 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 HIST1H1TP22492 207 aaPredicted RBP9.35□□□□□ -0.91
SYNE1-203ENST00000354674 ATP5A1P25705 553 aaKnown RBP9.35□□□□□ -0.91
SYNE1-203ENST00000354674 PTPN6P29350 595 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 S100A3P33764 101 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 RPL3P39023 403 aaKnown RBP9.35□□□□□ -0.91
SYNE1-203ENST00000354674 GFERP55789 205 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 TAS2R50P59544 299 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 HES5Q5TA89 166 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 NKAIN2Q5VXU1 208 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 KDM4DQ6B0I6 523 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 AMER3Q8N944 861 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 SNX33Q8WV41 574 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 WBP1Q96G27 269 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 OR52E6Q96RD3 313 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 TMEM43Q9BTV4 400 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 MND1Q9BWT6 205 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 ARRDC1-AS1Q9H2J1 176 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 SLC25A37Q9NYZ2 338 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 PI4KAP42356 2102 aa9.35□□□□□ -0.91
SYNE1-203ENST00000354674 SMAD9O15198 467 aaKnown RBP9.34□□□□□ -0.91
SYNE1-203ENST00000354674 ERI3O43414 337 aaKnown RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms