RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 SEC61A2Q9H9S3 476 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 GPR83Q9NYM4 423 aa11.3□□□□□ -0.6
SMAD9-201ENST00000350148 MYO9BQ13459 2157 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 ALOX12BO75342 701 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 HMGN2P46Q86SG4 172 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 TBC1D15Q8TC07 691 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 PHOX2BQ99453 314 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 FUNDC2Q9BWH2 189 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 LDAHQ9H6V9 325 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 PRDM7Q9NQW5 492 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 PAK1IP1Q9NWT1 392 aaPredicted RBP11.29□□□□□ -0.6
SMAD9-201ENST00000350148 USP36Q9P275 1121 aaKnown RBP11.29□□□□□ -0.6
SMAD9-201ENST00000350148 GRIP1Q9Y3R0 1128 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 PATJQ8NI35 1801 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 TOX3O15405 576 aaPredicted RBP11.29□□□□□ -0.6
SMAD9-201ENST00000350148 GMDSO60547 372 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 ACP2P11117 423 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 CD22P20273 847 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 POLR2HP52434 150 aaKnown RBP11.29□□□□□ -0.6
SMAD9-201ENST00000350148 CSNK2A1P68400 391 aaPredicted RBP11.29□□□□□ -0.6
SMAD9-201ENST00000350148 MAT1AQ00266 395 aaKnown RBP11.29□□□□□ -0.6
SMAD9-201ENST00000350148 GPR19Q15760 415 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 ARSKQ6UWY0 536 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 FOXRED2Q8IWF2 684 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 DOK4Q8TEW6 326 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 ADOQ96SZ5 270 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 SLC30A2Q9BRI3 323 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 AMBRA1Q9C0C7 1298 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 DSN1Q9H410 356 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 C1orf196B1AJZ1 125 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 CHMP24386 653 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 PTPN6P29350 595 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 OPRL1P41146 370 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 EMP3P54852 163 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 DLX2Q07687 328 aaPredicted RBP11.29□□□□□ -0.6
SMAD9-201ENST00000350148 C17orf67Q0P5P2 114 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 SLC6A19Q695T7 634 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 PLBD1Q6P4A8 553 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 LEG1Q6P5S2 330 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 DGLUCYQ7Z3D6 616 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 LRRC56Q8IYG6 542 aaPredicted RBP11.29□□□□□ -0.6
SMAD9-201ENST00000350148 KLHL15Q96M94 604 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 RNF121Q9H920 327 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 CNIH4Q9P003 139 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 COPZ2Q9P299 210 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 POU2F3Q9UKI9 436 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 PPP1R3DO95685 299 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 NID1P14543 1247 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 RAE1P78406 368 aaKnown RBP11.29□□□□□ -0.6
SMAD9-201ENST00000350148 RAET1LQ5VY80 246 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 SLX4IPQ5VYV7 408 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 COMMD3Q9UBI1 195 aa11.29□□□□□ -0.6
SMAD9-201ENST00000350148 ZNF28P17035 718 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 IDUAP35475 653 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 ETV5P41161 510 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 PPICP45877 212 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 RIDAP52758 137 aaKnown RBP11.28□□□□□ -0.6
SMAD9-201ENST00000350148 PDX1P52945 283 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 SNRPGP62308 76 aaKnown RBP11.28□□□□□ -0.6
SMAD9-201ENST00000350148 CCNJQ5T5M9 372 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 QSOX2Q6ZRP7 698 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 FAM160A2Q8N612 972 aaPredicted RBP11.28□□□□□ -0.6
SMAD9-201ENST00000350148 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.28□□□□□ -0.61e-6■■□□□ 13.6
SMAD9-201ENST00000350148 ENPP5Q9UJA9 477 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 MOKQ9UQ07 419 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 TRBV4-1A0A0J9YWV2 114 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 TMEM221A6NGB7 291 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 C11orf98E9PRG8 122 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 TNFRSF10AO00220 468 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 CELP19835 753 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 GLT8D1Q68CQ7 371 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 MEPCEQ7L2J0 689 aaKnown RBP11.28□□□□□ -0.6
SMAD9-201ENST00000350148 KCTD20Q7Z5Y7 419 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 B3GNT8Q7Z7M8 397 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 PTOV1Q86YD1 416 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 THAP3Q8WTV1 239 aaPredicted RBP11.28□□□□□ -0.6
SMAD9-201ENST00000350148 FRMD6Q96NE9 622 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 PPA2Q9H2U2 334 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 SLA2Q9H6Q3 261 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 ASB4Q9Y574 426 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 FKBP7Q9Y680 259 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 KANTRA0A1W2PQU2 76 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 ADAM23O75077 832 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 UTS2O95399 124 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 ERCC1P07992 297 aaPredicted RBP11.28□□□□□ -0.6
SMAD9-201ENST00000350148 H2BFMP0C1H6 154 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 GKN3PP0CG01 181 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 ARHGDIBP52566 201 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 SEC23BQ15437 767 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 KCNJ8Q15842 424 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 NKAIN2Q5VXU1 208 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 ZNF767PQ75MW2 155 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 COMMD7Q86VX2 200 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 CPOQ8IVL8 374 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 TNFAIP8L1Q8WVP5 186 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 CCDC120Q96HB5 630 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 IP6K3Q96PC2 410 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 SDF2Q99470 211 aa11.28□□□□□ -0.6
SMAD9-201ENST00000350148 CDX2Q99626 313 aaPredicted RBP11.28□□□□□ -0.6
SMAD9-201ENST00000350148 FN3KQ9H479 309 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms