RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 PCNPQ8WW12 178 aaKnown RBP12.29□□□□□ -0.44
CASC4-202ENST00000345795 HLA-CQ95604 372 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 OR6C1Q96RD1 312 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 FLRT3Q9NZU0 649 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 STUB1Q9UNE7 303 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 HEXBP07686 556 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 CHRNB1P11230 501 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 PPP5CP53041 499 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 TSPAN31Q12999 210 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 SSX1Q16384 188 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 BICRALQ6AI39 1079 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 KIRREL2Q6UWL6 708 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 SLC7A5P1Q8MH63 180 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 SIRT6Q8N6T7 355 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 OR8S1Q8NH09 359 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 SGTBQ96EQ0 304 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 EMC6Q9BV81 110 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 PIGUQ9H490 435 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 CMAHPQ9Y471 501 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 MTCH2Q9Y6C9 303 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 PLXND1Q9Y4D7 1925 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 FREM2Q5SZK8 3169 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 TEX51A0A1B0GUA7 166 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 TMEM72A0PK05 275 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 PATE3B3GLJ2 98 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 GPR89AB7ZAQ6 455 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 SMLR1H3BR10 107 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 PDGFBP01127 241 aaPredicted RBP12.29□□□□□ -0.44
CASC4-202ENST00000345795 HLA-DPB1P04440 258 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 RLN1P04808 185 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 GPR89BP0CG08 455 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 SCN1BQ07699 218 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 C1QL3Q5VWW1 255 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 DYNC2LI1Q8TCX1 351 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 TAPBPLQ9BX59 468 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 TRIM36Q9NQ86 728 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 NUFIP1Q9UHK0 495 aaKnown RBP12.29□□□□□ -0.44
CASC4-202ENST00000345795 MUTYHQ9UIF7 546 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 HSPE1-MOB4S4R3N1 261 aa12.29□□□□□ -0.44
CASC4-202ENST00000345795 OR5K4A6NMS3 321 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 HK1P19367 917 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 GALK2Q01415 458 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 RAB43Q86YS6 212 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 DNAAF1Q8NEP3 725 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 OR4C15Q8NGM1 316 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 MR1Q95460 341 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 POP5Q969H6 163 aaKnown RBP12.28□□□□□ -0.44
CASC4-202ENST00000345795 FKBP10Q96AY3 582 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 CITED4Q96RK1 184 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 SYT4Q9H2B2 425 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 TP63Q9H3D4 680 aaPredicted RBP12.28□□□□□ -0.44
CASC4-202ENST00000345795 ZMAT3Q9HA38 289 aaKnown RBP12.28□□□□□ -0.44
CASC4-202ENST00000345795 QPCTLQ9NXS2 382 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 NCDNQ9UBB6 729 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 SCML1Q9UN30 329 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 CHST2Q9Y4C5 530 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 A0A1W2PRQ8 180 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 DUX1O43812 170 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 OXSR1O95747 527 aaPredicted RBP12.28□□□□□ -0.44
CASC4-202ENST00000345795 LALBAP00709 142 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 PLATP00750 562 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 SNRPBP14678 240 aaKnown RBP12.28□□□□□ -0.44
CASC4-202ENST00000345795 HIST1H1CP16403 213 aaKnown RBP12.28□□□□□ -0.44
CASC4-202ENST00000345795 HOXB6P17509 224 aaKnown RBP12.28□□□□□ -0.44
CASC4-202ENST00000345795 FOXK2Q01167 660 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.28□□□□□ -0.44
CASC4-202ENST00000345795 TAF13Q15543 124 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 GLYR1Q49A26 553 aaPredicted RBP12.28□□□□□ -0.44
CASC4-202ENST00000345795 SLX4IPQ5VYV7 408 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 SFRP4Q6FHJ7 346 aaPredicted RBP12.28□□□□□ -0.44
CASC4-202ENST00000345795 ZNF425Q6IV72 752 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.28□□□□□ -0.44
CASC4-202ENST00000345795 DNAJC5GQ8N7S2 189 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 NECAB3Q96P71 396 aaPredicted RBP12.28□□□□□ -0.44
CASC4-202ENST00000345795 ING3Q9NXR8 418 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 ADAM29Q9UKF5 820 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 RNF215Q9Y6U7 377 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 FAM221BA6H8Z2 402 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 KDM4EB2RXH2 506 aaPredicted RBP12.28□□□□□ -0.44
CASC4-202ENST00000345795 NPIPB8E9PQR5 432 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 SSNA1O43805 119 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 KHDRBS3O75525 346 aaKnown RBP12.28□□□□□ -0.44
CASC4-202ENST00000345795 SLITRK5O94991 958 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 SLC6A6P31641 620 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 CCKBRP32239 447 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 FABP5Q01469 135 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 C11orf88Q6PI97 169 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 ZNF517Q6ZMY9 492 aaPredicted RBP12.28□□□□□ -0.44
CASC4-202ENST00000345795 CAMKMTQ7Z624 323 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 ALDH16A1Q8IZ83 802 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 CADM3Q8N126 398 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 ZNF248Q8NDW4 579 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 GOT1L1Q8NHS2 421 aaPredicted RBP12.28□□□□□ -0.44
CASC4-202ENST00000345795 GABARAPL3Q9BY60 117 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 METTL7AQ9H8H3 244 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 GALNT9Q9HCQ5 603 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 RASD1Q9Y272 281 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 CDH10Q9Y6N8 788 aa12.28□□□□□ -0.44
CASC4-202ENST00000345795 E9PI62 339 aa12.27□□□□□ -0.44
CASC4-202ENST00000345795 SEC14L5O43304 696 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms