RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 BPIFA2Q96DR5 249 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 ZNF578Q96N58 590 aaPredicted RBP11.34□□□□□ -0.59
COL12A1-202ENST00000345356 TGM7Q96PF1 710 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 SPIN2AQ99865 258 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 SPIN2BQ9BPZ2 258 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 RHNO1Q9BSD3 238 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 ZNF442Q9H7R0 627 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 ARNT2Q9HBZ2 717 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 SPHK1Q9NYA1 384 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 MUTYHQ9UIF7 546 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 ZNF281Q9Y2X9 895 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 URGCP-MRPS24S4R325 110 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 TRAV27A0A087WT01 109 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 ZNF44P15621 663 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 SH2D5Q6ZV89 423 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 ZNF695Q8IW36 515 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 OR4C15Q8NGM1 316 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 HPSE2Q8WWQ2 592 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 BORCS8Q96FH0 119 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 HCAR1Q9BXC0 346 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 TMEM231Q9H6L2 316 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 KPTNQ9Y664 436 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 ROBO1Q9Y6N7 1651 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 MTMR11A4FU01 709 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 K7ERQ8 282 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 SYT7O43581 403 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 ZNF623O75123 536 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 STK17BO94768 372 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 GJB5O95377 273 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 TAGLN2P37802 199 aaKnown RBP11.34□□□□□ -0.59
COL12A1-202ENST00000345356 SQSTM1Q13501 440 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 TMEM35AQ53FP2 167 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 ZNF322Q6U7Q0 402 aaPredicted RBP11.34□□□□□ -0.59
COL12A1-202ENST00000345356 MEX3BQ6ZN04 569 aaKnown RBP11.34□□□□□ -0.59
COL12A1-202ENST00000345356 MFSD4AQ8N468 514 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 MTMR14Q8NCE2 650 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 CREB3L4Q8TEY5 395 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 RAB3CQ96E17 227 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 IL26Q9NPH9 171 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 ASB6Q9NWX5 421 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 NDUFB11Q9NX14 153 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 IL17CQ9P0M4 197 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 WASF3Q9UPY6 502 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 MROH6A6NGR9 719 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 AIPO00170 330 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 MBP02144 154 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 GJA1P17302 382 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 POU3F4P49335 361 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 SNRPGP62308 76 aaKnown RBP11.34□□□□□ -0.59
COL12A1-202ENST00000345356 RSU1Q15404 277 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 SYPL1Q16563 259 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 CTSL3PQ5NE16 218 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 XAF1Q6GPH4 301 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 IL17RCQ8NAC3 791 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 RAB39BQ96DA2 213 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 DOK1Q99704 481 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 WDR77Q9BQA1 342 aaPredicted RBP11.34□□□□□ -0.59
COL12A1-202ENST00000345356 CDCA4Q9BXL8 241 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 ICKQ9UPZ9 632 aa11.34□□□□□ -0.59
COL12A1-202ENST00000345356 ATG12O94817 140 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 HMGN2P05204 90 aaKnown RBP11.33□□□□□ -0.6
COL12A1-202ENST00000345356 SELPP16109 830 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 LAG3P18627 525 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 ARRB2P32121 409 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 ADRA1AP35348 466 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 HTD2P86397 168 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 SNTB1Q13884 538 aaKnown RBP11.33□□□□□ -0.6
COL12A1-202ENST00000345356 PUS10Q3MIT2 529 aaKnown RBP11.33□□□□□ -0.6
COL12A1-202ENST00000345356 ENTPD8Q5MY95 495 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 FBXL4Q9UKA2 621 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 GPRIN2O60269 458 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 B4GALT3O60512 393 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 DPM1O60762 260 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 USP2O75604 605 aaPredicted RBP11.33□□□□□ -0.6
COL12A1-202ENST00000345356 SBK2P0C263 348 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 TLE3Q04726 772 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 DPPA4Q7L190 304 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 ASPGQ86U10 573 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 CCDC190Q86UF4 302 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 SULF2Q8IWU5 870 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 SLC35F3Q8IY50 421 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 AVL9Q8NBF6 648 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 WFIKKN2Q8TEU8 576 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 NUDT8Q8WV74 236 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 OR11A1Q9GZK7 315 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 PIK3C2AO00443 1686 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 A0A0U1RQF3 1178 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 COCHO43405 550 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 PIPP12273 146 aaPredicted RBP11.33□□□□□ -0.6
COL12A1-202ENST00000345356 MC3RP41968 323 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 STEAP1BQ6NZ63 245 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 KCNIP4Q6PIL6 250 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 RIMKLAQ8IXN7 391 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 KHSRPQ92945 711 aaKnown RBP eCLIP11.33□□□□□ -0.6
COL12A1-202ENST00000345356 DVL3Q92997 716 aaPredicted RBP11.33□□□□□ -0.6
COL12A1-202ENST00000345356 WIF1Q9Y5W5 379 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.33□□□□□ -0.6
COL12A1-202ENST00000345356 PMS2P2O95744 297 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 DHCR24Q15392 516 aa11.33□□□□□ -0.6
COL12A1-202ENST00000345356 PLPP5Q8NEB5 264 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms