RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 HS3ST3B1Q9Y662 390 aa12.4□□□□□ -0.42
CDC42-202ENST00000344548 A0A1W2PPW3 197 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 EFCAB9A8MZ26 197 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 NDUFB5O43674 189 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 STK17BO94768 372 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 ADORA3P0DMS8 318 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 CCNA2P20248 432 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 EVI2BP34910 448 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 LIPAP38571 399 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 DHRS13Q6UX07 377 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 ATG4DQ86TL0 474 aaPredicted RBP12.39□□□□□ -0.43
CDC42-202ENST00000344548 IGFN1Q86VF2 1251 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 DUSP19Q8WTR2 217 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 MYDGFQ969H8 173 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 TP53INP1Q96A56 240 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 MED20Q9H944 212 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 WDR54Q9H977 334 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 HINT3Q9NQE9 182 aaKnown RBP12.39□□□□□ -0.43
CDC42-202ENST00000344548 ZC3H12DA2A288 527 aaKnown RBP12.39□□□□□ -0.43
CDC42-202ENST00000344548 B4E171 279 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 OR2J2O76002 312 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 TGFBR1P36897 503 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 TSPAN7P41732 249 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 RBM34P42696 430 aaKnown RBP12.39□□□□□ -0.43
CDC42-202ENST00000344548 COPZ1P61923 177 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 ZSWIM7Q19AV6 140 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 SDK2Q58EX2 2172 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 UBE2UQ5VVX9 321 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 C1QL3Q5VWW1 255 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 PLAG1Q6DJT9 500 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 POMZP3Q6PJE2 187 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 LYPD8Q6UX82 237 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 SLC46A3Q7Z3Q1 461 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 OAFQ86UD1 273 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 C7orf57Q8NEG2 295 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 ANKK1Q8NFD2 765 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 OR2T33Q8NG76 320 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 WDR36Q8NI36 951 aaKnown RBP12.39□□□□□ -0.43
CDC42-202ENST00000344548 NUBPLQ8TB37 319 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 RPL3LQ92901 407 aaKnown RBP12.39□□□□□ -0.43
CDC42-202ENST00000344548 TBL1XR1Q9BZK7 514 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 LAT2Q9GZY6 243 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 EVA1AQ9H8M9 152 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 TMEM9BQ9NQ34 198 aa12.39□□□□□ -0.43
CDC42-202ENST00000344548 EXOSC3Q9NQT5 275 aaKnown RBP12.39□□□□□ -0.43
CDC42-202ENST00000344548 LOC102723996A0A087X1L8 192 aa12.38□□□□□ -0.43
CDC42-202ENST00000344548 OR6C70A6NIJ9 312 aa12.38□□□□□ -0.43
CDC42-202ENST00000344548 C9orf172C9J069 976 aa12.38□□□□□ -0.43
CDC42-202ENST00000344548 PPM1BO75688 479 aa12.38□□□□□ -0.43
CDC42-202ENST00000344548 ITPKBP27987 946 aa12.38□□□□□ -0.43
CDC42-202ENST00000344548 TACR3P29371 465 aa12.38□□□□□ -0.43
CDC42-202ENST00000344548 TTKP33981 857 aa12.38□□□□□ -0.43
CDC42-202ENST00000344548 TGFBR2P37173 567 aa12.38□□□□□ -0.43
CDC42-202ENST00000344548 LTBQ06643 244 aa12.38□□□□□ -0.43
CDC42-202ENST00000344548 TUBA3CQ13748 450 aa12.38□□□□□ -0.43
CDC42-202ENST00000344548 INPP5JQ15735 1006 aaPredicted RBP12.38□□□□□ -0.43
CDC42-202ENST00000344548 TBCEQ15813 527 aaPredicted RBP12.38□□□□□ -0.43
CDC42-202ENST00000344548 CTF1Q16619 201 aa12.38□□□□□ -0.43
CDC42-202ENST00000344548 BTBD16Q32M84 506 aa12.38□□□□□ -0.43
CDC42-202ENST00000344548 SLC25A30Q5SVS4 291 aa12.38□□□□□ -0.43
CDC42-202ENST00000344548 DCAF12Q5T6F0 453 aa12.38□□□□□ -0.43
CDC42-202ENST00000344548 AADACL4Q5VUY2 407 aa12.38□□□□□ -0.43
CDC42-202ENST00000344548 WBP2NLQ6ICG8 309 aa12.38□□□□□ -0.43
CDC42-202ENST00000344548 MARCH9Q86YJ5 346 aa12.38□□□□□ -0.43
CDC42-202ENST00000344548 CLDN22Q8N7P3 220 aa12.38□□□□□ -0.43
CDC42-202ENST00000344548 YIPF6Q96EC8 236 aa12.38□□□□□ -0.43
CDC42-202ENST00000344548 MOGAT1Q96PD6 335 aa12.38□□□□□ -0.43
CDC42-202ENST00000344548 PTTG2Q9NZH5 202 aa12.38□□□□□ -0.43
CDC42-202ENST00000344548 FOXJ2Q9P0K8 574 aa12.38□□□□□ -0.43
CDC42-202ENST00000344548 MYOTQ9UBF9 498 aa12.38□□□□□ -0.43
CDC42-202ENST00000344548 GPN3Q9UHW5 284 aaPredicted RBP12.38□□□□□ -0.43
CDC42-202ENST00000344548 FBXL4Q9UKA2 621 aa12.38□□□□□ -0.43
CDC42-202ENST00000344548 ALPK2Q86TB3 2170 aa12.38□□□□□ -0.43
CDC42-202ENST00000344548 PCSK5Q92824 1860 aa12.38□□□□□ -0.43
CDC42-202ENST00000344548 IGHV1-45A0A0A0MS14 117 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 SOCS6O14544 535 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 IMPA2O14732 288 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 CSO75390 466 aaKnown RBP12.37□□□□□ -0.43
CDC42-202ENST00000344548 TRMUO75648 421 aaKnown RBP12.37□□□□□ -0.43
CDC42-202ENST00000344548 PPP1R3DO95685 299 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 COX6A1P12074 109 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 TGM1P22735 817 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 GRK5P34947 590 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 SLC9A3P48764 834 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 LSM3P62310 102 aaKnown RBP12.37□□□□□ -0.43
CDC42-202ENST00000344548 TCF15Q12870 199 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 LSAMPQ13449 338 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 CDCP2Q5VXM1 449 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 ZBTB46Q86UZ6 589 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 SVOPQ8N4V2 548 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 ZNF563Q8TA94 476 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 ELP5Q8TE02 316 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 DNAJA4Q8WW22 397 aaPredicted RBP12.37□□□□□ -0.43
CDC42-202ENST00000344548 HGDQ93099 445 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 KTI12Q96EK9 354 aaPredicted RBP12.37□□□□□ -0.43
CDC42-202ENST00000344548 IMMP1LQ96LU5 166 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 SPRY4Q9C004 299 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 CNOT2Q9NZN8 540 aaKnown RBP12.37□□□□□ -0.43
CDC42-202ENST00000344548 A0A1W2PQD3 144 aa12.37□□□□□ -0.43
CDC42-202ENST00000344548 EFCAB10A6NFE3 127 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms