RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 EEF1A1P68104 462 aaKnown RBP16.16■□□□□ 0.18
USF2-202ENST00000343550 CDK6Q00534 326 aa16.16■□□□□ 0.18
USF2-202ENST00000343550 CYLC2Q14093 348 aaPredicted RBP16.16■□□□□ 0.18
USF2-202ENST00000343550 CAPRIN1Q14444 709 aaKnown RBP16.16■□□□□ 0.18
USF2-202ENST00000343550 CTU2Q2VPK5 515 aaKnown RBP16.16■□□□□ 0.18
USF2-202ENST00000343550 MMEL1Q495T6 779 aa16.16■□□□□ 0.18
USF2-202ENST00000343550 REEP3Q6NUK4 255 aa16.16■□□□□ 0.18
USF2-202ENST00000343550 MTDHQ86UE4 582 aaKnown RBP16.16■□□□□ 0.18
USF2-202ENST00000343550 SNX32Q86XE0 403 aa16.16■□□□□ 0.18
USF2-202ENST00000343550 NFKBIDQ8NI38 313 aa16.16■□□□□ 0.18
USF2-202ENST00000343550 TMEM234Q8WY98 164 aa16.16■□□□□ 0.18
USF2-202ENST00000343550 LRRC58Q96CX6 371 aa16.16■□□□□ 0.18
USF2-202ENST00000343550 ZNF845Q96IR2 970 aaPredicted RBP16.16■□□□□ 0.18
USF2-202ENST00000343550 TMUB1Q9BVT8 246 aa16.16■□□□□ 0.18
USF2-202ENST00000343550 PINK1Q9BXM7 581 aa16.16■□□□□ 0.18
USF2-202ENST00000343550 FAM107BQ9H098 131 aa16.16■□□□□ 0.18
USF2-202ENST00000343550 TMEM185BQ9H7F4 350 aa16.16■□□□□ 0.18
USF2-202ENST00000343550 IFT52Q9Y366 437 aa16.16■□□□□ 0.18
USF2-202ENST00000343550 CHST2Q9Y4C5 530 aa16.16■□□□□ 0.18
USF2-202ENST00000343550 CAPN7Q9Y6W3 813 aa16.16■□□□□ 0.18
USF2-202ENST00000343550 MTORP42345 2549 aa16.16■□□□□ 0.18
USF2-202ENST00000343550 ANKHD1Q8IWZ3 2542 aaKnown RBP16.16■□□□□ 0.18
USF2-202ENST00000343550 ITPR3Q14573 2671 aa16.16■□□□□ 0.18
USF2-202ENST00000343550 BBIP1A8MTZ0 92 aa16.15■□□□□ 0.18
USF2-202ENST00000343550 EEF1E1-BLOC1S5C9J1V9 151 aa16.15■□□□□ 0.18
USF2-202ENST00000343550 EEF1E1O43324 174 aaKnown RBP16.15■□□□□ 0.18
USF2-202ENST00000343550 SNX3O60493 162 aa16.15■□□□□ 0.18
USF2-202ENST00000343550 IL18BPO95998 194 aa16.15■□□□□ 0.18
USF2-202ENST00000343550 THBS1P07996 1170 aa16.15■□□□□ 0.18
USF2-202ENST00000343550 EPXP11678 715 aa16.15■□□□□ 0.18
USF2-202ENST00000343550 ETS2P15036 469 aa16.15■□□□□ 0.18
USF2-202ENST00000343550 SHC1P29353 583 aa16.15■□□□□ 0.18
USF2-202ENST00000343550 SLC6A8P48029 635 aa16.15■□□□□ 0.18
USF2-202ENST00000343550 LARS2Q15031 903 aaKnown RBP16.15■□□□□ 0.18
USF2-202ENST00000343550 SGCBQ16585 318 aa16.15■□□□□ 0.18
USF2-202ENST00000343550 TRMT5Q32P41 509 aaKnown RBP16.15■□□□□ 0.18
USF2-202ENST00000343550 LIN52Q52LA3 116 aa16.15■□□□□ 0.18
USF2-202ENST00000343550 NANOGP8Q6NSW7 305 aa16.15■□□□□ 0.18
USF2-202ENST00000343550 ZNF836Q6ZNA1 936 aa16.15■□□□□ 0.18
USF2-202ENST00000343550 ESPNLQ6ZVH7 1005 aa16.15■□□□□ 0.18
USF2-202ENST00000343550 GRAMD2AQ8IUY3 354 aa16.15■□□□□ 0.18
USF2-202ENST00000343550 CLIP4Q8N3C7 705 aa16.15■□□□□ 0.18
USF2-202ENST00000343550 ZNF563Q8TA94 476 aa16.15■□□□□ 0.18
USF2-202ENST00000343550 BBS10Q8TAM1 723 aa16.15■□□□□ 0.18
USF2-202ENST00000343550 FIG4Q92562 907 aa16.15■□□□□ 0.18
USF2-202ENST00000343550 CCDC106Q9BWC9 280 aa16.15■□□□□ 0.18
USF2-202ENST00000343550 RSPO3Q9BXY4 272 aaPredicted RBP16.15■□□□□ 0.18
USF2-202ENST00000343550 KAT8Q9H7Z6 458 aaKnown RBP16.15■□□□□ 0.18
USF2-202ENST00000343550 NANOGQ9H9S0 305 aa16.15■□□□□ 0.18
USF2-202ENST00000343550 JKAMPQ9P055 326 aa16.15■□□□□ 0.18
USF2-202ENST00000343550 ZNF443Q9Y2A4 671 aaPredicted RBP16.15■□□□□ 0.18
USF2-202ENST00000343550 PLEKHA6Q9Y2H5 1048 aa16.15■□□□□ 0.18
USF2-202ENST00000343550 PRRC2AP48634 2157 aaKnown RBP16.15■□□□□ 0.18
USF2-202ENST00000343550 DOCK7Q96N67 2140 aa16.15■□□□□ 0.18
USF2-202ENST00000343550 SLC22A20A6NK97 555 aa16.14■□□□□ 0.18
USF2-202ENST00000343550 MRASO14807 208 aa16.14■□□□□ 0.18
USF2-202ENST00000343550 PABPC4LP0CB38 370 aaKnown RBP16.14■□□□□ 0.18
USF2-202ENST00000343550 TMIGD3P0DMS9 266 aaPredicted RBP16.14■□□□□ 0.18
USF2-202ENST00000343550 SLC6A2P23975 617 aa16.14■□□□□ 0.18
USF2-202ENST00000343550 DNASE1P24855 282 aa16.14■□□□□ 0.18
USF2-202ENST00000343550 EIF1AXP47813 144 aaKnown RBP16.14■□□□□ 0.18
USF2-202ENST00000343550 IDH2P48735 452 aaKnown RBP16.14■□□□□ 0.18
USF2-202ENST00000343550 FOXF2Q12947 444 aa16.14■□□□□ 0.18
USF2-202ENST00000343550 SCARB2Q14108 478 aa16.14■□□□□ 0.18
USF2-202ENST00000343550 ZSWIM7Q19AV6 140 aa16.14■□□□□ 0.18
USF2-202ENST00000343550 TMEM176BQ3YBM2 270 aaPredicted RBP16.14■□□□□ 0.18
USF2-202ENST00000343550 ZNF311Q5JNZ3 666 aa16.14■□□□□ 0.18
USF2-202ENST00000343550 RNF220Q5VTB9 566 aa16.14■□□□□ 0.18
USF2-202ENST00000343550 REP15Q6BDI9 236 aa16.14■□□□□ 0.18
USF2-202ENST00000343550 PTOV1Q86YD1 416 aa16.14■□□□□ 0.18
USF2-202ENST00000343550 TGIF2LYQ8IUE0 185 aa16.14■□□□□ 0.18
USF2-202ENST00000343550 OR10D3Q8NH80 312 aa16.14■□□□□ 0.18
USF2-202ENST00000343550 RP9Q8TA86 221 aaKnown RBP16.14■□□□□ 0.18
USF2-202ENST00000343550 INTS12Q96CB8 462 aaKnown RBP16.14■□□□□ 0.18
USF2-202ENST00000343550 ZFP3Q96NJ6 502 aa16.14■□□□□ 0.18
USF2-202ENST00000343550 SLC39A3Q9BRY0 314 aa16.14■□□□□ 0.18
USF2-202ENST00000343550 SPATA9Q9BWV2 254 aa16.14■□□□□ 0.18
USF2-202ENST00000343550 NSRP1Q9H0G5 558 aaKnown RBP16.14■□□□□ 0.18
USF2-202ENST00000343550 PAQR5Q9NXK6 330 aaPredicted RBP16.14■□□□□ 0.18
USF2-202ENST00000343550 AKAP6Q13023 2319 aa16.14■□□□□ 0.17
USF2-202ENST00000343550 CFAP73A6NFT4 308 aa16.14■□□□□ 0.17
USF2-202ENST00000343550 FXYD1O00168 92 aa16.14■□□□□ 0.17
USF2-202ENST00000343550 AP3D1O14617 1153 aa16.14■□□□□ 0.17
USF2-202ENST00000343550 TNFSF11O14788 317 aa16.14■□□□□ 0.17
USF2-202ENST00000343550 GKN3PP0CG01 181 aa16.14■□□□□ 0.17
USF2-202ENST00000343550 SFTPDP35247 375 aa16.14■□□□□ 0.17
USF2-202ENST00000343550 APOBEC1P41238 236 aaKnown RBP16.14■□□□□ 0.17
USF2-202ENST00000343550 ACAA2P42765 397 aaKnown RBP16.14■□□□□ 0.17
USF2-202ENST00000343550 CARD18P57730 90 aa16.14■□□□□ 0.17
USF2-202ENST00000343550 SORDQ00796 357 aa16.14■□□□□ 0.17
USF2-202ENST00000343550 MERTKQ12866 999 aa16.14■□□□□ 0.17
USF2-202ENST00000343550 PON3Q15166 354 aa16.14■□□□□ 0.17
USF2-202ENST00000343550 PLEKHM3Q6ZWE6 761 aa16.14■□□□□ 0.17
USF2-202ENST00000343550 P4HA3Q7Z4N8 544 aa16.14■□□□□ 0.17
USF2-202ENST00000343550 PCYOX1LQ8NBM8 494 aa16.14■□□□□ 0.17
USF2-202ENST00000343550 ATP6V1C2Q8NEY4 427 aa16.14■□□□□ 0.17
USF2-202ENST00000343550 OR2V1Q8NHB1 315 aa16.14■□□□□ 0.17
USF2-202ENST00000343550 LINC01560Q8TB33 94 aa16.14■□□□□ 0.17
USF2-202ENST00000343550 FNDC9Q8TBE3 224 aa16.14■□□□□ 0.17
USF2-202ENST00000343550 OSTF1Q92882 214 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms