RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 HTR3AP46098 478 aa9.86□□□□□ -0.83
TRAF3IP2-201ENST00000340026 EIF2B2P49770 351 aaKnown RBP9.86□□□□□ -0.83
TRAF3IP2-201ENST00000340026 ACTA2P62736 377 aa9.86□□□□□ -0.83
TRAF3IP2-201ENST00000340026 ACTG2P63267 376 aa9.86□□□□□ -0.83
TRAF3IP2-201ENST00000340026 TDGQ13569 410 aa9.86□□□□□ -0.83
TRAF3IP2-201ENST00000340026 GRM7Q14831 915 aa9.86□□□□□ -0.83
TRAF3IP2-201ENST00000340026 SLC35F1Q5T1Q4 408 aa9.86□□□□□ -0.83
TRAF3IP2-201ENST00000340026 HACD4Q5VWC8 232 aa9.86□□□□□ -0.83
TRAF3IP2-201ENST00000340026 SHFQ7M4L6 423 aa9.86□□□□□ -0.83
TRAF3IP2-201ENST00000340026 MARCH9Q86YJ5 346 aa9.86□□□□□ -0.83
TRAF3IP2-201ENST00000340026 BCORP1Q8N888 145 aa9.86□□□□□ -0.83
TRAF3IP2-201ENST00000340026 SYT14Q8NB59 555 aa9.86□□□□□ -0.83
TRAF3IP2-201ENST00000340026 OR2T27Q8NH04 317 aa9.86□□□□□ -0.83
TRAF3IP2-201ENST00000340026 C16orf52Q8NHV5 167 aa9.86□□□□□ -0.83
TRAF3IP2-201ENST00000340026 HPS1Q92902 700 aa9.86□□□□□ -0.83
TRAF3IP2-201ENST00000340026 TMEM203Q969S6 136 aa9.86□□□□□ -0.83
TRAF3IP2-201ENST00000340026 GAS2L1Q99501 681 aaPredicted RBP9.86□□□□□ -0.83
TRAF3IP2-201ENST00000340026 KCNJ15Q99712 375 aa9.86□□□□□ -0.83
TRAF3IP2-201ENST00000340026 MAP3K3Q99759 626 aa9.86□□□□□ -0.83
TRAF3IP2-201ENST00000340026 STARD5Q9NSY2 213 aa9.86□□□□□ -0.83
TRAF3IP2-201ENST00000340026 IRAK4Q9NWZ3 460 aa9.86□□□□□ -0.83
TRAF3IP2-201ENST00000340026 SLC6A5Q9Y345 797 aa9.86□□□□□ -0.83
TRAF3IP2-201ENST00000340026 SPTBN5Q9NRC6 3674 aaKnown RBP9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 RANBP2P49792 3224 aaKnown RBP9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 IGKV3D-11A0A0A0MRZ8 115 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 DAPL1A0PJW8 107 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 OGG1O15527 345 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 APOL3O95236 402 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 PPICP45877 212 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 MAZP56270 477 aaKnown RBP9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 PRPS1P60891 318 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 DCAF7P61962 342 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 ZNF85Q03923 595 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 ZNF791Q3KP31 576 aaPredicted RBP9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 CCDC58Q4VC31 144 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 YOD1Q5VVQ6 348 aaPredicted RBP9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 FAM131AQ6UXB0 335 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 VASH1Q7L8A9 365 aaPredicted RBP9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 KLBQ86Z14 1044 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 OR5W2Q8NH69 310 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 ITFG2Q969R8 447 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 SGTBQ96EQ0 304 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 ZDHHC12Q96GR4 267 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 DIRAS2Q96HU8 199 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 CMTM3Q96MX0 182 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 SLC46A1Q96NT5 459 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 DEPDC7Q96QD5 511 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 HCAR1Q9BXC0 346 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 RNF32Q9H0A6 362 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 ERVMER34-1Q9H9K5 563 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 PDE7BQ9NP56 450 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 NRIP3Q9NQ35 241 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 LANCL2Q9NS86 450 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 GMEB2Q9UKD1 530 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 ZMIZ1Q9ULJ6 1067 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 ZNF337Q9Y3M9 751 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 TRAV1-2A0A0B4J238 106 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 C2orf92A0A1B0GVN3 265 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 A0A1W2PQ09 198 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 FAM183AA6NL82 134 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 IL33O95760 270 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 SERPINA3P01011 423 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 CTSBP07858 339 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 SSTR4P31391 388 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 NRG3P56975 720 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 HNRNPKP61978 463 aaKnown RBP eCLIP9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 C1orf61Q13536 156 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 CDONQ4KMG0 1287 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 ZNF542PQ5EBM4 170 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 KIRREL2Q6UWL6 708 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 SHISA5Q8N114 240 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 OR8H2Q8N162 312 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 TMEM99Q8N816 258 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 DUSP18Q8NEJ0 188 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 MRPL48Q96GC5 212 aaKnown RBP9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 PEX11GQ96HA9 241 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 PGLYRP3Q96LB9 341 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 ISG20L2Q9H9L3 353 aaKnown RBP9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 TOR4AQ9NXH8 423 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 RABL2AQ9UBK7 228 aaPredicted RBP9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 RABL2BQ9UNT1 228 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 NPFFR2Q9Y5X5 522 aa9.85□□□□□ -0.83
TRAF3IP2-201ENST00000340026 SHISA3A0PJX4 238 aa9.84□□□□□ -0.83
TRAF3IP2-201ENST00000340026 TO15178 435 aa9.84□□□□□ -0.83
TRAF3IP2-201ENST00000340026 TRIM3O75382 744 aaPredicted RBP9.84□□□□□ -0.83
TRAF3IP2-201ENST00000340026 TXNDC12O95881 172 aa9.84□□□□□ -0.83
TRAF3IP2-201ENST00000340026 MLLT3P42568 568 aaPredicted RBP9.84□□□□□ -0.83
TRAF3IP2-201ENST00000340026 NXPH1P58417 271 aa9.84□□□□□ -0.83
TRAF3IP2-201ENST00000340026 MXD1Q05195 221 aa9.84□□□□□ -0.83
TRAF3IP2-201ENST00000340026 LGALS3BPQ08380 585 aa9.84□□□□□ -0.83
TRAF3IP2-201ENST00000340026 CRMP1Q14194 572 aa9.84□□□□□ -0.83
TRAF3IP2-201ENST00000340026 C14orf28Q4W4Y0 310 aa9.84□□□□□ -0.83
TRAF3IP2-201ENST00000340026 THADAQ6YHU6 1953 aa9.84□□□□□ -0.83
TRAF3IP2-201ENST00000340026 NRARPQ7Z6K4 114 aa9.84□□□□□ -0.83
TRAF3IP2-201ENST00000340026 ZNF527Q8NB42 609 aa9.84□□□□□ -0.83
TRAF3IP2-201ENST00000340026 OR51Q1Q8NH59 317 aa9.84□□□□□ -0.83
TRAF3IP2-201ENST00000340026 OR14A16Q8NHC5 309 aa9.84□□□□□ -0.83
TRAF3IP2-201ENST00000340026 C1orf216Q8TAB5 229 aa9.84□□□□□ -0.83
TRAF3IP2-201ENST00000340026 TP53INP1Q96A56 240 aa9.84□□□□□ -0.83
TRAF3IP2-201ENST00000340026 C3orf49Q96BT1 292 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms