RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 IGHV3-9P01782 118 aa17.22■□□□□ 0.35
ITGA4-202ENST00000339307 BGNP21810 368 aa17.22■□□□□ 0.35
ITGA4-202ENST00000339307 BSPH1Q075Z2 132 aa17.22■□□□□ 0.35
ITGA4-202ENST00000339307 VEZF1Q14119 521 aa17.22■□□□□ 0.35
ITGA4-202ENST00000339307 PPA1Q15181 289 aa17.22■□□□□ 0.35
ITGA4-202ENST00000339307 MAPK14Q16539 360 aa17.22■□□□□ 0.35
ITGA4-202ENST00000339307 SYT14P1Q58G82 188 aa17.22■□□□□ 0.35
ITGA4-202ENST00000339307 TNFAIP8L3Q5GJ75 292 aa17.22■□□□□ 0.35
ITGA4-202ENST00000339307 ADAM5Q6NVV9 412 aa17.22■□□□□ 0.35
ITGA4-202ENST00000339307 TMPPEQ6ZT21 453 aa17.22■□□□□ 0.35
ITGA4-202ENST00000339307 GALNT5Q7Z7M9 940 aa17.22■□□□□ 0.35
ITGA4-202ENST00000339307 KBTBD8Q8NFY9 601 aa17.22■□□□□ 0.35
ITGA4-202ENST00000339307 LILRB1Q8NHL6 650 aaPredicted RBP17.22■□□□□ 0.35
ITGA4-202ENST00000339307 SMAP2Q8WU79 429 aaPredicted RBP17.22■□□□□ 0.35
ITGA4-202ENST00000339307 ROPN1LQ96C74 230 aa17.22■□□□□ 0.35
ITGA4-202ENST00000339307 USB1Q9BQ65 265 aaKnown RBP17.22■□□□□ 0.35
ITGA4-202ENST00000339307 SLC35A5Q9BS91 424 aa17.22■□□□□ 0.35
ITGA4-202ENST00000339307 C20orf27Q9GZN8 174 aa17.22■□□□□ 0.35
ITGA4-202ENST00000339307 SSU72Q9NP77 194 aaKnown RBP17.22■□□□□ 0.35
ITGA4-202ENST00000339307 CTPS2Q9NRF8 586 aa17.22■□□□□ 0.35
ITGA4-202ENST00000339307 ACER3Q9NUN7 267 aa17.22■□□□□ 0.35
ITGA4-202ENST00000339307 MARCOQ9UEW3 520 aaPredicted RBP17.22■□□□□ 0.35
ITGA4-202ENST00000339307 SPIN1Q9Y657 262 aaPredicted RBP17.22■□□□□ 0.35
ITGA4-202ENST00000339307 PRR14LQ5THK1 2151 aa17.22■□□□□ 0.35
ITGA4-202ENST00000339307 INAFM1C9JVW0 142 aa17.21■□□□□ 0.35
ITGA4-202ENST00000339307 TMCC2O75069 709 aa17.21■□□□□ 0.35
ITGA4-202ENST00000339307 PAX1P15863 534 aa17.21■□□□□ 0.35
ITGA4-202ENST00000339307 LBPP18428 481 aa17.21■□□□□ 0.35
ITGA4-202ENST00000339307 S100A3P33764 101 aa17.21■□□□□ 0.35
ITGA4-202ENST00000339307 CDKN1AP38936 164 aa17.21■□□□□ 0.35
ITGA4-202ENST00000339307 KHKP50053 298 aa17.21■□□□□ 0.35
ITGA4-202ENST00000339307 STX3Q13277 289 aa17.21■□□□□ 0.35
ITGA4-202ENST00000339307 CLEC12BQ2HXU8 276 aa17.21■□□□□ 0.35
ITGA4-202ENST00000339307 SPANXN4Q5MJ08 99 aa17.21■□□□□ 0.35
ITGA4-202ENST00000339307 TYW3Q6IPR3 259 aaKnown RBP17.21■□□□□ 0.35
ITGA4-202ENST00000339307 PIWIL2Q8TC59 973 aaKnown RBP17.21■□□□□ 0.35
ITGA4-202ENST00000339307 IGFBPL1Q8WX77 278 aa17.21■□□□□ 0.35
ITGA4-202ENST00000339307 ZHX1-C8orf76Q96EF9 292 aa17.21■□□□□ 0.35
ITGA4-202ENST00000339307 ALG2Q9H553 416 aa17.21■□□□□ 0.35
ITGA4-202ENST00000339307 ING1Q9UK53 422 aaPredicted RBP17.21■□□□□ 0.35
ITGA4-202ENST00000339307 SLC35A3Q9Y2D2 325 aa17.21■□□□□ 0.35
ITGA4-202ENST00000339307 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.21■□□□□ 0.35
ITGA4-202ENST00000339307 FREM1Q5H8C1 2179 aa17.21■□□□□ 0.35
ITGA4-202ENST00000339307 USF3Q68DE3 2245 aa17.21■□□□□ 0.35
ITGA4-202ENST00000339307 CCT8L1PA6NM43 557 aa17.21■□□□□ 0.34
ITGA4-202ENST00000339307 TM9SF1O15321 606 aa17.21■□□□□ 0.34
ITGA4-202ENST00000339307 KIAA0513O60268 411 aa17.21■□□□□ 0.34
ITGA4-202ENST00000339307 SOD3P08294 240 aa17.21■□□□□ 0.34
ITGA4-202ENST00000339307 GGT1P19440 569 aa17.21■□□□□ 0.34
ITGA4-202ENST00000339307 EDNRAP25101 427 aa17.21■□□□□ 0.34
ITGA4-202ENST00000339307 PGM1P36871 562 aa17.21■□□□□ 0.34
ITGA4-202ENST00000339307 APOBEC1P41238 236 aaKnown RBP17.21■□□□□ 0.34
ITGA4-202ENST00000339307 CLNS1AP54105 237 aaKnown RBP17.21■□□□□ 0.34
ITGA4-202ENST00000339307 PHC1P78364 1004 aa17.21■□□□□ 0.34
ITGA4-202ENST00000339307 TNK1Q13470 666 aa17.21■□□□□ 0.34
ITGA4-202ENST00000339307 FAM174BQ3ZCQ3 159 aa17.21■□□□□ 0.34
ITGA4-202ENST00000339307 ZNF672Q499Z4 452 aaPredicted RBP17.21■□□□□ 0.34
ITGA4-202ENST00000339307 HEPHL1Q6MZM0 1159 aa17.21■□□□□ 0.34
ITGA4-202ENST00000339307 ARFGAP2Q8N6H7 521 aa17.21■□□□□ 0.34
ITGA4-202ENST00000339307 MIPOL1Q8TD10 442 aa17.21■□□□□ 0.34
ITGA4-202ENST00000339307 SLC25A43Q8WUT9 341 aaPredicted RBP17.21■□□□□ 0.34
ITGA4-202ENST00000339307 ST6GALNAC1Q9NSC7 600 aaPredicted RBP17.21■□□□□ 0.34
ITGA4-202ENST00000339307 PNPOQ9NVS9 261 aa17.21■□□□□ 0.34
ITGA4-202ENST00000339307 EMC3Q9P0I2 261 aa17.21■□□□□ 0.34
ITGA4-202ENST00000339307 CHRNA9Q9UGM1 479 aa17.21■□□□□ 0.34
ITGA4-202ENST00000339307 LIPT1Q9Y234 373 aa17.21■□□□□ 0.34
ITGA4-202ENST00000339307 NOSIPQ9Y314 301 aaKnown RBP17.21■□□□□ 0.34
ITGA4-202ENST00000339307 MAGED1Q9Y5V3 778 aaPredicted RBP17.21■□□□□ 0.34
ITGA4-202ENST00000339307 CIB4A0PJX0 185 aa17.2■□□□□ 0.34
ITGA4-202ENST00000339307 DPRXA6NFQ7 191 aa17.2■□□□□ 0.34
ITGA4-202ENST00000339307 ZNF724A8MTY0 619 aa17.2■□□□□ 0.34
ITGA4-202ENST00000339307 ETV2O00321 342 aaPredicted RBP17.2■□□□□ 0.34
ITGA4-202ENST00000339307 BCAS1O75363 584 aaPredicted RBP17.2■□□□□ 0.34
ITGA4-202ENST00000339307 IGHV1-2P23083 117 aa17.2■□□□□ 0.34
ITGA4-202ENST00000339307 KCNJ10P78508 379 aa17.2■□□□□ 0.34
ITGA4-202ENST00000339307 SAXO2Q658L1 398 aa17.2■□□□□ 0.34
ITGA4-202ENST00000339307 MTDHQ86UE4 582 aaKnown RBP17.2■□□□□ 0.34
ITGA4-202ENST00000339307 MAPK1IP1LQ8NDC0 245 aa17.2■□□□□ 0.34
ITGA4-202ENST00000339307 ZNF75CPQ92670 426 aaPredicted RBP17.2■□□□□ 0.34
ITGA4-202ENST00000339307 TESCQ96BS2 214 aa17.2■□□□□ 0.34
ITGA4-202ENST00000339307 ZG16BQ96DA0 208 aa17.2■□□□□ 0.34
ITGA4-202ENST00000339307 SORT1Q99523 831 aa17.2■□□□□ 0.34
ITGA4-202ENST00000339307 POLE3Q9NRF9 147 aa17.2■□□□□ 0.34
ITGA4-202ENST00000339307 CISD1Q9NZ45 108 aaKnown RBP17.2■□□□□ 0.34
ITGA4-202ENST00000339307 CLDN24A6NM45 220 aa17.19■□□□□ 0.34
ITGA4-202ENST00000339307 RNF223E7ERA6 249 aa17.19■□□□□ 0.34
ITGA4-202ENST00000339307 E9PBE3 544 aa17.19■□□□□ 0.34
ITGA4-202ENST00000339307 ANKRD28O15084 1053 aa17.19■□□□□ 0.34
ITGA4-202ENST00000339307 DNAJA2O60884 412 aa17.19■□□□□ 0.34
ITGA4-202ENST00000339307 RAMP1O60894 148 aa17.19■□□□□ 0.34
ITGA4-202ENST00000339307 SCN2BO60939 215 aa17.19■□□□□ 0.34
ITGA4-202ENST00000339307 RAD51DO75771 328 aa17.19■□□□□ 0.34
ITGA4-202ENST00000339307 SNUPNO95149 360 aaKnown RBP17.19■□□□□ 0.34
ITGA4-202ENST00000339307 IDUAP35475 653 aa17.19■□□□□ 0.34
ITGA4-202ENST00000339307 IDH2P48735 452 aaKnown RBP17.19■□□□□ 0.34
ITGA4-202ENST00000339307 OR2B6P58173 313 aa17.19■□□□□ 0.34
ITGA4-202ENST00000339307 CHRNEQ04844 493 aa17.19■□□□□ 0.34
ITGA4-202ENST00000339307 DPY19L1Q2PZI1 675 aa17.19■□□□□ 0.34
ITGA4-202ENST00000339307 FRRS1Q6ZNA5 592 aa17.19■□□□□ 0.34
ITGA4-202ENST00000339307 GRINAQ7Z429 371 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms