RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 SLC48A1Q6P1K1 146 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 SFXN4Q6P4A7 337 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 TOMM5Q8N4H5 51 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 OR2T35Q8NGX2 323 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 FLVCR1-AS1Q8TAF5 88 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 LINC00052Q96N35 136 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 JAM3Q9BX67 310 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 REG4Q9BYZ8 158 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 ISG20L2Q9H9L3 353 aaKnown RBP17.38■□□□□ 0.37
PSPC1-201ENST00000338910 CNIH4Q9P003 139 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 CES1P1Q9UKY3 287 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 ENTPD4Q9Y227 616 aa17.38■□□□□ 0.37
PSPC1-201ENST00000338910 SURF4O15260 269 aa17.37■□□□□ 0.37
PSPC1-201ENST00000338910 CTSVO60911 334 aa17.37■□□□□ 0.37
PSPC1-201ENST00000338910 HMGN2P05204 90 aaKnown RBP17.37■□□□□ 0.37
PSPC1-201ENST00000338910 H2AFB2P0C5Z0 115 aa17.37■□□□□ 0.37
PSPC1-201ENST00000338910 UGT2B7P16662 529 aa17.37■□□□□ 0.37
PSPC1-201ENST00000338910 CCR6P51684 374 aa17.37■□□□□ 0.37
PSPC1-201ENST00000338910 RPS15AP62244 130 aaKnown RBP17.37■□□□□ 0.37
PSPC1-201ENST00000338910 ILF3Q12906 894 aaKnown RBP eCLIP17.37■□□□□ 0.371e-6■■■■□ 22.3
PSPC1-201ENST00000338910 TMEM44Q2T9K0 475 aa17.37■□□□□ 0.37
PSPC1-201ENST00000338910 CHMP1BQ7LBR1 199 aa17.37■□□□□ 0.37
PSPC1-201ENST00000338910 ASPGQ86U10 573 aa17.37■□□□□ 0.37
PSPC1-201ENST00000338910 BBS1Q8NFJ9 593 aa17.37■□□□□ 0.37
PSPC1-201ENST00000338910 RLN3Q8WXF3 142 aa17.37■□□□□ 0.37
PSPC1-201ENST00000338910 C16orf58Q96GQ5 468 aa17.37■□□□□ 0.37
PSPC1-201ENST00000338910 FANCMQ8IYD8 2048 aa17.37■□□□□ 0.37
PSPC1-201ENST00000338910 TMEM265A0A087WTH1 108 aa17.37■□□□□ 0.37
PSPC1-201ENST00000338910 FAM170BA6NMN3 283 aa17.37■□□□□ 0.37
PSPC1-201ENST00000338910 CD3GP09693 182 aa17.37■□□□□ 0.37
PSPC1-201ENST00000338910 HTR1FP30939 366 aa17.37■□□□□ 0.37
PSPC1-201ENST00000338910 EPHA4P54764 986 aa17.37■□□□□ 0.37
PSPC1-201ENST00000338910 OR10A3P58181 314 aa17.37■□□□□ 0.37
PSPC1-201ENST00000338910 BTN1A1Q13410 526 aa17.37■□□□□ 0.37
PSPC1-201ENST00000338910 SLC30A6Q6NXT4 461 aa17.37■□□□□ 0.37
PSPC1-201ENST00000338910 OR4Q3Q8NH05 313 aa17.37■□□□□ 0.37
PSPC1-201ENST00000338910 ZCCHC10Q8TBK6 192 aa17.37■□□□□ 0.37
PSPC1-201ENST00000338910 GPR174Q9BXC1 333 aa17.37■□□□□ 0.37
PSPC1-201ENST00000338910 C1QTNF6Q9BXI9 259 aa17.37■□□□□ 0.37
PSPC1-201ENST00000338910 FBXO9Q9UK97 447 aaPredicted RBP17.37■□□□□ 0.37
PSPC1-201ENST00000338910 HS3ST3A1Q9Y663 406 aa17.37■□□□□ 0.37
PSPC1-201ENST00000338910 PRAMEF26H0Y7S4 382 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 FZD7O75084 574 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 CSNK2A2P19784 350 aaPredicted RBP17.36■□□□□ 0.37
PSPC1-201ENST00000338910 RPL6Q02878 288 aaKnown RBP17.36■□□□□ 0.37
PSPC1-201ENST00000338910 GAS6Q14393 721 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 KIR2DS3Q14952 304 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 SMAD2Q15796 467 aaKnown RBP17.36■□□□□ 0.37
PSPC1-201ENST00000338910 SEZ6L2Q6UXD5 910 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 BTN2A1Q7KYR7 527 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 FTMTQ8N4E7 242 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 FAM160A2Q8N612 972 aaPredicted RBP17.36■□□□□ 0.37
PSPC1-201ENST00000338910 UXS1Q8NBZ7 420 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 ERMAPQ96PL5 475 aaPredicted RBP17.36■□□□□ 0.37
PSPC1-201ENST00000338910 LMAN1LQ9HAT1 526 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 EQTNQ9NQ60 294 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 A0A0G2JK05 382 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 C10orf142B7Z368 130 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 J3QRE1 110 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 ZNF593O00488 134 aaPredicted RBP17.36■□□□□ 0.37
PSPC1-201ENST00000338910 SSNA1O43805 119 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 TOXO94900 526 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 HRGP04196 525 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 CELA2BP08218 269 aaPredicted RBP17.36■□□□□ 0.37
PSPC1-201ENST00000338910 LCN1P31025 176 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 MPIP34949 423 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 MLLT1Q03111 559 aaPredicted RBP17.36■□□□□ 0.37
PSPC1-201ENST00000338910 TGM3Q08188 693 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 DEFB134Q4QY38 66 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 NHLRC3Q5JS37 347 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 SYT13Q7L8C5 426 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 SIRT6Q8N6T7 355 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 OR9A2Q8NGT5 310 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 TRMT10AQ8TBZ6 339 aaKnown RBP17.36■□□□□ 0.37
PSPC1-201ENST00000338910 ST8SIA4Q92187 359 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 RIT1Q92963 219 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 OR2A5Q96R48 311 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 ZNF436Q9C0F3 470 aaPredicted RBP17.36■□□□□ 0.37
PSPC1-201ENST00000338910 SHARPINQ9H0F6 387 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 ACTR10Q9NZ32 417 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 KCNE3Q9Y6H6 103 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 SLCO1B1Q9Y6L6 691 aa17.36■□□□□ 0.37
PSPC1-201ENST00000338910 LAMA1P25391 3075 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 MFSD2BA6NFX1 497 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 DNAJB6O75190 326 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 TNFP01375 233 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 SLC35G6P0C7Q6 338 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 GNSP15586 552 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 SDHBP21912 280 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 ATP6V1E1P36543 226 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 MC3RP41968 323 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 TSFMP43897 325 aaKnown RBP17.35■□□□□ 0.37
PSPC1-201ENST00000338910 SELENOPP49908 381 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 ARFIP1P53367 373 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 TUSC1Q2TAM9 212 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 FAM27D1Q5T7N8 215 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 KIAA0895LQ68EN5 471 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 NLRC3Q7RTR2 1065 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 CMIPQ8IY22 773 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 KAT2AQ92830 837 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms